Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0927900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:40708658:40712960:-1 gene:Os01g0927900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Aspartate kinase precursor (EC 2.7.2.4). (Os01t0927900-01)
Sequence	ATGGCGATCGCTCTCCGATTAGCGGCCGCGCCGCTCCGCCTCCGCCTCGTCTCGCCGGCC CCTCCGGCGATCGGCGGCGCGGGAGATGGAGGACGACGAGGAGGAGGAGGAGCAGCTCGT ATCGGTGTCCTGGGCAGGGCTCGCTGCCGCCGCCGCCGCGGCGGAGGCGGGAGACTGGAG GTGGCGGCGGCGGCCGCCGATGACTCCGCTCGCTGTCGGGCCAAGGGAGTGGGCGCCGCC GCCGCCGCGGCGGAAACCCTAGGTGGGATCGGGGTGGGAGGTGGGGACCAGCTGAGCGTG GTGATGAAGTTCGGGGGGTCGTCGGTGTCGTCGGCGGCGAGGATGCGGGAGGTGGCGGGC CTCATCCTCGCCTTCCCCGAGGAGCGCCCCGTCGTCGTCCTCTCCGCCATGGGGAAGACC ACCAATCTCCTCCTCCTCGCTGGTGAGAAGGCAGTGGGATGCGGCGTGATCCGTGTTTCG GAAATTGAAGAGTGGAATTTGATCAAAGATCTACACATTAAAACTGTGGAGGAACTTGCA CTGCCAAGATCTGTAATACACACTATGCTGGATGAACTGGAGCAGCTCTTGAAAGGTATT GCAATGATGAAAGAGCTGACACTTCGGACCACTGACTACCTTGTTTCATTTGGGGAGTGC ATGTCTACACGGATTTTTGCTGCTTATTTGAACAAAATCGGAGTAAAAGCACGGCAGTAC GACGCATTTGATATTGGTTTCATAACAACAGACGATTTCGGAAACGCGGACATCTTGGAG GCAACTTATCCTGCTGTTGCGAAGAGATTACATGGAGACTGGATTCGTGATCCAGCGATA CCTATTGTTACTGGGTTCCTTGGGAAGGGCTGGAAATCAGGCGCTGTAACCACTTTAGGC CGAGGTGGCAGTGACTTGACTGCTACAACCATTGGTAAAGCCCTGGGGTTGAGAGAAATT CAGGTATGGAAAGATGTTGATGGTGTACTGACCTGTGATCCAAATATCTACCCGAATGCA ACCACTGTGCCATACTTAACATTTGAAGAGGCAGCAGAACTTGCTTATTTTGGTGCCCAG GTATTACATCCACAATCTATGAGACCTGCTAGAGAAGGTGATATACCAGTCAGGGTTAAG AATTCGTACAACCCTAAAGCTCCAGGCACCCTGATCACTAAACAAAGAGAGATGGATAAG GTTGTGCTAACTAGCATAGTGCTCAAGTCAAATGTCACTATGTTGGATATAGTAAGCACT CGGATGCTTGGTCAATTTGGTTTTCTGGCAAAGGTCTTCTCTATATTCGAAGATCTAGGG ATATCTGTAGATTGTGTGGCTACTAGTGAAGTTAGTATTTCTGTGTCGCTTGATCCATCA AAGATCTGGAGCAGGGAACTTATTCAACAGGAACTTGACCATGTAGTTGAAGAGCTTGAG AAAATTGCAGTTGTCCATCTACTTCAGCAGAGGGCAATAATATCACTCATTGGAAACGTA CGGCGATCATCTCTTATACTGGAAAAGGCCTTTCAAGTGTTGAGGAAAAGCGGGGTGAAT GTCCAGATGATCTCGCAAGGTGCATCCAAGGTTAACATGTCTCTGATTGTTCATGATAGC GAGGCAAAGCAGTGCATAAAGGCCCTCCACCAGGCGTTCTTCGAGGACGATGTCCTGACA GAAGTCGAGGAAGAAGCCCTTCACATGAGCTGA

Peptide Sequence

PEP ID	Os01t0927900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:40708658:40712960:-1 gene:Os01g0927900 transcript:Os01t0927900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Aspartate kinase precursor (EC 2.7.2.4). (Os01t0927900-01)
Sequence	MAIALRLAAAPLRLRLVSPAPPAIGGAGDGGRRGGGGAARIGVLGRARCRRRRGGGGRLE VAAAAADDSARCRAKGVGAAAAAAETLGGIGVGGGDQLSVVMKFGGSSVSSAARMREVAG LILAFPEERPVVVLSAMGKTTNLLLLAGEKAVGCGVIRVSEIEEWNLIKDLHIKTVEELA LPRSVIHTMLDELEQLLKGIAMMKELTLRTTDYLVSFGECMSTRIFAAYLNKIGVKARQY DAFDIGFITTDDFGNADILEATYPAVAKRLHGDWIRDPAIPIVTGFLGKGWKSGAVTTLG RGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNIYPNATTVPYLTFEEAAELAYFGAQ VLHPQSMRPAREGDIPVRVKNSYNPKAPGTLITKQREMDKVVLTSIVLKSNVTMLDIVST RMLGQFGFLAKVFSIFEDLGISVDCVATSEVSISVSLDPSKIWSRELIQQELDHVVEELE KIAVVHLLQQRAIISLIGNVRRSSLILEKAFQVLRKSGVNVQMISQGASKVNMSLIVHDS EAKQCIKALHQAFFEDDVLTEVEEEALHMS

Transcript Sequence

Transcript ID	Os01t0927900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:40708658:40712960:-1 gene:Os01g0927900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Aspartate kinase precursor (EC 2.7.2.4). (Os01t0927900-01)
Sequence	TACAGTGAGCTCCCCTCTCCCTCTCTCACTCTACCAAACTGCAGAGGAGAGGAGAATGGC GATCGCTCTCCGATTAGCGGCCGCGCCGCTCCGCCTCCGCCTCGTCTCGCCGGCCCCTCC GGCGATCGGCGGCGCGGGAGATGGAGGACGACGAGGAGGAGGAGGAGCAGCTCGTATCGG TGTCCTGGGCAGGGCTCGCTGCCGCCGCCGCCGCGGCGGAGGCGGGAGACTGGAGGTGGC GGCGGCGGCCGCCGATGACTCCGCTCGCTGTCGGGCCAAGGGAGTGGGCGCCGCCGCCGC CGCGGCGGAAACCCTAGGTGGGATCGGGGTGGGAGGTGGGGACCAGCTGAGCGTGGTGAT GAAGTTCGGGGGGTCGTCGGTGTCGTCGGCGGCGAGGATGCGGGAGGTGGCGGGCCTCAT CCTCGCCTTCCCCGAGGAGCGCCCCGTCGTCGTCCTCTCCGCCATGGGGAAGACCACCAA TCTCCTCCTCCTCGCTGGTGAGAAGGCAGTGGGATGCGGCGTGATCCGTGTTTCGGAAAT TGAAGAGTGGAATTTGATCAAAGATCTACACATTAAAACTGTGGAGGAACTTGCACTGCC AAGATCTGTAATACACACTATGCTGGATGAACTGGAGCAGCTCTTGAAAGGTATTGCAAT GATGAAAGAGCTGACACTTCGGACCACTGACTACCTTGTTTCATTTGGGGAGTGCATGTC TACACGGATTTTTGCTGCTTATTTGAACAAAATCGGAGTAAAAGCACGGCAGTACGACGC ATTTGATATTGGTTTCATAACAACAGACGATTTCGGAAACGCGGACATCTTGGAGGCAAC TTATCCTGCTGTTGCGAAGAGATTACATGGAGACTGGATTCGTGATCCAGCGATACCTAT TGTTACTGGGTTCCTTGGGAAGGGCTGGAAATCAGGCGCTGTAACCACTTTAGGCCGAGG TGGCAGTGACTTGACTGCTACAACCATTGGTAAAGCCCTGGGGTTGAGAGAAATTCAGGT ATGGAAAGATGTTGATGGTGTACTGACCTGTGATCCAAATATCTACCCGAATGCAACCAC TGTGCCATACTTAACATTTGAAGAGGCAGCAGAACTTGCTTATTTTGGTGCCCAGGTATT ACATCCACAATCTATGAGACCTGCTAGAGAAGGTGATATACCAGTCAGGGTTAAGAATTC GTACAACCCTAAAGCTCCAGGCACCCTGATCACTAAACAAAGAGAGATGGATAAGGTTGT GCTAACTAGCATAGTGCTCAAGTCAAATGTCACTATGTTGGATATAGTAAGCACTCGGAT GCTTGGTCAATTTGGTTTTCTGGCAAAGGTCTTCTCTATATTCGAAGATCTAGGGATATC TGTAGATTGTGTGGCTACTAGTGAAGTTAGTATTTCTGTGTCGCTTGATCCATCAAAGAT CTGGAGCAGGGAACTTATTCAACAGGAACTTGACCATGTAGTTGAAGAGCTTGAGAAAAT TGCAGTTGTCCATCTACTTCAGCAGAGGGCAATAATATCACTCATTGGAAACGTACGGCG ATCATCTCTTATACTGGAAAAGGCCTTTCAAGTGTTGAGGAAAAGCGGGGTGAATGTCCA GATGATCTCGCAAGGTGCATCCAAGGTTAACATGTCTCTGATTGTTCATGATAGCGAGGC AAAGCAGTGCATAAAGGCCCTCCACCAGGCGTTCTTCGAGGACGATGTCCTGACAGAAGT CGAGGAAGAAGCCCTTCACATGAGCTGATCAGCTTAGTCCGTACAACCCCAGAAAAACAA ATATTGCAACCTGGAGCAGGTTTTCTAGCATCGCCTCCAGTTATTTTTTCACTCGTATGA CCAGCATTCGATGCGTTGTTTCCTCGCTAGTTCAGGTGGTTTAGTTTGACATTTGGTAGC TCGATCTGTTTTTTACCAGGATGCAAAACGACTGGAGCATGCGTCACAAGTTCCTCGCTT GAATGTGCTTTCACTTTGGATCTAAAGTGCCTTAAAAGTATTAAAAAAACTTGATCT