Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0927600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:40695664:40700914:1 gene:Os01g0927600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 2 description:Similar to Auxin response factor 2 (ARF1-binding protein) (ARF1-BP). (Os01t0927600-01)
Sequence	ATGCCGCCGGCCGCCATGGCTCCCCCTCCCCCGCCGCAGGGCTCCTCCACAGGGGATCCG CTCTACGACGAGCTGTGGCACGCCTGCGCGGGGCCGCTCGTCACCGTGCCGCGGGTGGGC GACCTCGTCTTCTACTTCCCGCAGGGGCACATCGAGCAGGTGGAGGCGTCCATGAACCAG GTTGCCGACAGCCAGATGCGCCTCTACGATCTGCCCTCCAAGCTGCTTTGCCGTGTCCTC AACGTCGAGCTCAAGGCGGAGCAAGACACCGACGAGGTCTACGCGCAGGTCATGCTCATG CCGGAGCCCGAGCAAAATGAGATGGCGGTGGAGAAGACGACTCCTACGTCCGGCCCTGTG CAGGCAAGGCCGCCGGTGAGGTCCTTCTGCAAGACGCTCACCGCGTCTGACACCAGCACG CACGGCGGCTTCTCTGTACTCCGCCGCCACGCTGATGAGTGCCTCCCTCCCCTGGATATG ACCCAGTCGCCACCCACACAGGAGCTCGTGGCCAAGGATCTGCACAGCATGGACTGGCGC TTCCGTCACATCTTTCGCGGGCAACCGAGGAGGCATCTCCTTCAGAGTGGTTGGAGTGTG TTTGTCAGTTCCAAAAGGCTTGTTGCTGGGGATGCTTTCATTTTCCTCAGAGGAGAGAAT GGTGAACTCCGTGTTGGTGTTAGACGAGCTATGAGGCAGCTGTCCAATGTGCCTTCTTCA GTCATATCTAGCCAAAGCATGCACCTGGGAGTCCTTGCTACTGCATGGCATGCTATCAAC ACGAAGAGTATGTTCACCGTCTACTACAAACCTAGGACGAGCCCTTCAGAGTTCATTATA CCATATGATCAGTATATGGAGTCCGTCAAAAACAATTACTCTGTTGGGATGAGGTTCAGG ATGAGGTTTGAAGGAGAAGAGGCACCAGAGCAGAGGTTTACTGGTACTATAATTGGCAGT GAGAATCTCGACCCAGTGTGGCCTGAATCAAGTTGGAGATCCCTGAAGGTGCGGTGGGAT GAACCATCAACTATTCCGCGGCCAGATAGAGTCTCTCCTTGGAAAATAGAGCCTGCTTCA TCACCTCCTGTTAACCCCCTTCCTCTTTCTAGGGTTAAAAGACCTAGGCCAAATGCTCCT CCAGCATCTCCTGAATCTCCTATTCTTACGAAAGAAGCTGCTACTAAGGTTGACACTGAT CCTGCTCAAGCACAACGAAGTCAAAACAGTACGGTCTTGCAAGGTCAAGAACAAATGACC TTGAGGAGCAACCTTACTGAGAGTAATGACTCTGATGTCACTGCTCATAAGCCAATGATG TGGTCTCCATCCCCAAATGCTGCAAAAGCCCACCCCTTGACATTTCAGCAGAGACCCCCT ATGGATAATTGGATGCAGTTGGGAAGGCGTGAAACTGACTTTAAGGATGTCCGTTCTGGC TCTCAATCTTTTGGTGATTCCCCAGGCTTCTTTATGCAGAATTTTGATGAGGCTCCTAAC CGTCTTACTTCTTTCAAGAACCAGTTTCAGGATCAAGGTTCTGCTCGGCACTTCTCTGAC CCATACTACTATGTATCTCCACAGCCTTCCCTAACTGTTGAATCAAGCACACAGATGCAC ACAGACAGTAAGGAGTTACATTTCTGGAATGGCCAGAGTACTGTGTATGGTAATTCGAGA GACCGACCACAGAATTTCAGATTCGAACAGAACTCATCAAGTTGGTTAAATCAGTCATTT GCCCGACCTGAACAGCCAAGAGTGATTAGACCGCATGCATCAATAGCTCCAGTTGAGTTG GAAAAAACAGAAGGCAGTGGGTTTAAGATTTTTGGGTTTAAAGTTGATACAACCAATGCT CCTAACAATCACTTGAGCTCCCCGATGGCTGCAACACATGAGCCTATGCTTCAAACTCCA TCATCATTGAATCAGTTGCAACCTGTACAAACTGATTGCATTCCTGAGGTATCAGTAAGC ACAGCTGGAACGGCGACTGAGAATGAGAAAAGCGGTCAGCAAGCTCAACAGAGTTCAAAA GATGTTCAAAGCAAGACTCAGGTTGCTTCGACGAGGAGTTGTACAAAGGTCCATAAGCAA GGCGTTGCACTTGGCAGATCTGTGGATCTTTCAAAGTTCAGTAACTATGATGAACTCAAA GCTGAGCTAGACAAGATGTTTGAATTCGATGGTGAATTGGTGTCTTCAAACAAAAACTGG CAAATTGTTTATACTGATAATGAGGGTGATATGATGCTTGTTGGAGACGACCCATGGGAA GAATTCTGCAGCATTGTGCGGAAGATTTATATTTACACCAAGGAGGAGGTCCAGAAGATG AATTCGAAATCAAATGCCCCAAGGAAAGATGACTCTTCAGAAAATGAGAAAGGTCATCTG CCGATGCCCAACAAATCAGATAACTAG

Peptide Sequence

PEP ID	Os01t0927600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:40695664:40700914:1 gene:Os01g0927600 transcript:Os01t0927600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 2 description:Similar to Auxin response factor 2 (ARF1-binding protein) (ARF1-BP). (Os01t0927600-01)
Sequence	MPPAAMAPPPPPQGSSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQ VADSQMRLYDLPSKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPV QARPPVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWR FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSS VISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFR MRFEGEEAPEQRFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPAS SPPVNPLPLSRVKRPRPNAPPASPESPILTKEAATKVDTDPAQAQRSQNSTVLQGQEQMT LRSNLTESNDSDVTAHKPMMWSPSPNAAKAHPLTFQQRPPMDNWMQLGRRETDFKDVRSG SQSFGDSPGFFMQNFDEAPNRLTSFKNQFQDQGSARHFSDPYYYVSPQPSLTVESSTQMH TDSKELHFWNGQSTVYGNSRDRPQNFRFEQNSSSWLNQSFARPEQPRVIRPHASIAPVEL EKTEGSGFKIFGFKVDTTNAPNNHLSSPMAATHEPMLQTPSSLNQLQPVQTDCIPEVSVS TAGTATENEKSGQQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELK AELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKM NSKSNAPRKDDSSENEKGHLPMPNKSDN

Transcript Sequence

Transcript ID	Os01t0927600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:40695664:40700914:1 gene:Os01g0927600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 2 description:Similar to Auxin response factor 2 (ARF1-binding protein) (ARF1-BP). (Os01t0927600-01)
Sequence	TGTACTCCCTACAAAGAGACCACCACCAATCCGGCTACCCCATCCCCCCTCCTCTTTCTC TCCTCTTCTCCTCTCCACAAAAACATTTCTACTGCTTGCTCGTCTAGTATTCCCCACCTC CCTTTCCTTGCCTTCCTCGCTGCCTCCTCCTCTTCCTCCTCCGTCTCCGCTAGGGTTTCC GCGCCGCCGCCGCCCCGATCCGAGATGCCGCCGGCCGCCATGGCTCCCCCTCCCCCGCCG CAGGGCTCCTCCACAGGGGATCCGCTCTACGACGAGCTGTGGCACGCCTGCGCGGGGCCG CTCGTCACCGTGCCGCGGGTGGGCGACCTCGTCTTCTACTTCCCGCAGGGGCACATCGAG CAGGTGGAGGCGTCCATGAACCAGGTTGCCGACAGCCAGATGCGCCTCTACGATCTGCCC TCCAAGCTGCTTTGCCGTGTCCTCAACGTCGAGCTCAAGGCGGAGCAAGACACCGACGAG GTCTACGCGCAGGTCATGCTCATGCCGGAGCCCGAGCAAAATGAGATGGCGGTGGAGAAG ACGACTCCTACGTCCGGCCCTGTGCAGGCAAGGCCGCCGGTGAGGTCCTTCTGCAAGACG CTCACCGCGTCTGACACCAGCACGCACGGCGGCTTCTCTGTACTCCGCCGCCACGCTGAT GAGTGCCTCCCTCCCCTGGATATGACCCAGTCGCCACCCACACAGGAGCTCGTGGCCAAG GATCTGCACAGCATGGACTGGCGCTTCCGTCACATCTTTCGCGGGCAACCGAGGAGGCAT CTCCTTCAGAGTGGTTGGAGTGTGTTTGTCAGTTCCAAAAGGCTTGTTGCTGGGGATGCT TTCATTTTCCTCAGAGGAGAGAATGGTGAACTCCGTGTTGGTGTTAGACGAGCTATGAGG CAGCTGTCCAATGTGCCTTCTTCAGTCATATCTAGCCAAAGCATGCACCTGGGAGTCCTT GCTACTGCATGGCATGCTATCAACACGAAGAGTATGTTCACCGTCTACTACAAACCTAGG ACGAGCCCTTCAGAGTTCATTATACCATATGATCAGTATATGGAGTCCGTCAAAAACAAT TACTCTGTTGGGATGAGGTTCAGGATGAGGTTTGAAGGAGAAGAGGCACCAGAGCAGAGG TTTACTGGTACTATAATTGGCAGTGAGAATCTCGACCCAGTGTGGCCTGAATCAAGTTGG AGATCCCTGAAGGTGCGGTGGGATGAACCATCAACTATTCCGCGGCCAGATAGAGTCTCT CCTTGGAAAATAGAGCCTGCTTCATCACCTCCTGTTAACCCCCTTCCTCTTTCTAGGGTT AAAAGACCTAGGCCAAATGCTCCTCCAGCATCTCCTGAATCTCCTATTCTTACGAAAGAA GCTGCTACTAAGGTTGACACTGATCCTGCTCAAGCACAACGAAGTCAAAACAGTACGGTC TTGCAAGGTCAAGAACAAATGACCTTGAGGAGCAACCTTACTGAGAGTAATGACTCTGAT GTCACTGCTCATAAGCCAATGATGTGGTCTCCATCCCCAAATGCTGCAAAAGCCCACCCC TTGACATTTCAGCAGAGACCCCCTATGGATAATTGGATGCAGTTGGGAAGGCGTGAAACT GACTTTAAGGATGTCCGTTCTGGCTCTCAATCTTTTGGTGATTCCCCAGGCTTCTTTATG CAGAATTTTGATGAGGCTCCTAACCGTCTTACTTCTTTCAAGAACCAGTTTCAGGATCAA GGTTCTGCTCGGCACTTCTCTGACCCATACTACTATGTATCTCCACAGCCTTCCCTAACT GTTGAATCAAGCACACAGATGCACACAGACAGTAAGGAGTTACATTTCTGGAATGGCCAG AGTACTGTGTATGGTAATTCGAGAGACCGACCACAGAATTTCAGATTCGAACAGAACTCA TCAAGTTGGTTAAATCAGTCATTTGCCCGACCTGAACAGCCAAGAGTGATTAGACCGCAT GCATCAATAGCTCCAGTTGAGTTGGAAAAAACAGAAGGCAGTGGGTTTAAGATTTTTGGG TTTAAAGTTGATACAACCAATGCTCCTAACAATCACTTGAGCTCCCCGATGGCTGCAACA CATGAGCCTATGCTTCAAACTCCATCATCATTGAATCAGTTGCAACCTGTACAAACTGAT TGCATTCCTGAGGTATCAGTAAGCACAGCTGGAACGGCGACTGAGAATGAGAAAAGCGGT CAGCAAGCTCAACAGAGTTCAAAAGATGTTCAAAGCAAGACTCAGGTTGCTTCGACGAGG AGTTGTACAAAGGTCCATAAGCAAGGCGTTGCACTTGGCAGATCTGTGGATCTTTCAAAG TTCAGTAACTATGATGAACTCAAAGCTGAGCTAGACAAGATGTTTGAATTCGATGGTGAA TTGGTGTCTTCAAACAAAAACTGGCAAATTGTTTATACTGATAATGAGGGTGATATGATG CTTGTTGGAGACGACCCATGGGAAGAATTCTGCAGCATTGTGCGGAAGATTTATATTTAC ACCAAGGAGGAGGTCCAGAAGATGAATTCGAAATCAAATGCCCCAAGGAAAGATGACTCT TCAGAAAATGAGAAAGGTCATCTGCCGATGCCCAACAAATCAGATAACTAGGTTCAGTGA AGCGAGATGATACAAGAGGTAGATCGCATGGAGTCTTGAGAGAGAGATGCCATTCTGCGG GTCCCAGTCAAGTAAACCCCCTGATGTGTTGGTGATCACCCCTGCCCCCCCTTTTGCTTA TCTGATGGCTGATGCAATGCAAACCCTATGGCTTTAGCTAGTATGAGATGTAGACTGCCT ATTGTTTATCCTTTTGTTCCTTTTTCTTCTCTTGGCAGAAAGATTTAGGGCCAAGATTTA TCATTATTGCTATTGCCCCTCTCAACTCCTCCCAACTCTCTGATGTAAATATTTATCTAC GTAGCCAGCCACCCAGCCAGAAGTAGAGCAGTAGTAGTAGAGTTACCCCCTACCTTGTAT TAACCAGCAGCCTATTCCCCCGGATAAATTTGTGTAAGCTCTGTAGCTCGAGATAAAAAA AAATGGCGATCGAACGAACGAACAAATGGCGTATGTATTGTCTGATCTTTGATATAAATA TTTATCAATGAATGTATCATAGATGGAT