Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0927400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:40675141:40677841:-1 gene:Os01g0927400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os01t0927400-01)
Sequence	ATGGGCTCAAATGTTGAGCTGTGGTGCGAAGACATTTTACAAACGAAAGGGATTTGCGCT GCTGATAGATCAACTCATGATTATCCGAATGCAGAACTGGGTAGATTAAGCAGCCTTGAG GCAGACTGTAATGCGGTGGCTGGCATCTCAAACAATGTGCCTTCATATGCTCAACAGACT GACAGATCATGTTTGGATGTGGGCGATTGTTCAAATGTTGCTAGCTCTTCCAAAACTAAG AGGACTGATTCATGCTTTCTAGCTGATGATGGTTTTCAGTTACCTGATGAGAACCATGTT GACAAGAAGCAAAAGAGTGTGTGCGAAAAGGATGTGCATTGTGTGTCATCGCCACATGTA GATTTGGATGACAGGTTTACTGATCCATTGGATAACAGAGAAGACGAGCTTTGCTCTATT ACACAATATGACGTTCATAACTTTGAGAATGATAGGGAGATAGTGAATTTCGCTGCTGGT CAGATTTGGGCAGCATATGACTGGGAGAAGTTCCCTCGCAGATATGCACGGATTAACAAG ATTGTGGCTGACAAAGAGCACTTATATGTTTCATGGTTCAAACCATCCCCACAATCCCAT GACGAGAACAGGTGGTTTAGTGCAAGCTTGCCATTTGTTTGTGGAATTTTTATTGCGGAT GAATGTAAAATATCGGTAACTTGTCCAACTATGTTATGTCATCAGATATCTTCTGACAAT TGGAATCATCATCTTAAAGTTTATCCCCAGGAAGGGGAGGTATGGGCAATCTACAGTGAT TGGGACATTGGGTGGTGCAATGACCCTGGGATGCGGAAGAAAAGCACCTTTTATGTTGTA GAAATTCTTAACAGTTATTTAAAAGGCTCAGGCTGCACTGTCGCACAATTGGTAAAGGTA GATGGATATAGAAGCGTTTTCCAGAGGCACGTGAGGAGTGGGAGAGAGCAGTTATTACAA GTCCACATTCATAATCTGCTCATGTTTTCTCACAGGATTCCTTCATTTAGATTTACTTGT GATGTTGGAACGGTGTTTGAGCTTGAACATTCTGCTGTTCCAGAAAACTTGCAATATGAA AATACATCAGCAAGTGTTGCTCCTTTGTACCCTCTTCAAGGTTTACATGATGACTCAAAT GGTTTTCATGAAGTTGCTGCCACACACTTATCAAATCCTTCAACCAGCAAAATGGATTTA GGTAACCCCCAACAAGGAATGATGAACTACAATAATAAGTTATCACCTGAGCATTTTGTG GAGGGGCAGATCTGGGCTGTATATGATGCTCCGGATAGAATGCCAAGGTTGTATGTCAGA GTAATCCGTGTGGTATCCCATACTGCAGTTTCTGTGTTGAAGCTGGAACCTCACCCTATG CTCAATGAAGAAATACATTGGGTTGAAGATGGTCTACCAGTTGCTTGTGGGGTGTTTCGA GCTGGTAGTGAGACTGCTTGCAAAGAGATATCAGAATTCTCTCATCCGGTGGAGTGTGAC TGGAGCGCAAAGAGGTCTTTCTACCGAATTTTCCCAAAGAAAGGAGAAATATGGGCAATG TACAAAAACTGGAAGATAGCCTTCAGTAATGCTGACATCGACAAATGTGAACCTCGCATG GTTGAGATCCTCTCTGATTACTCAGATGAAATTGGAGTCAATGTATGCAGGCTGACTCGG GTAAAAGGCTGTTTAACCTTTTTCCAGAGAGTAATAGTGGAAGATTTCCATTTGACAAAG TTGATTTCAAGGTCTGAAATGCTAAGCTTTTCCCATCGTGTTCCTGCTTATGTAGTTATT GAAATTAAAGACCGTGATATACCAAAAGGGTCATGGCATCTGGAACCAAATGCCCTTCCT CTCAGGAATATAGATTAA

Peptide Sequence

PEP ID	Os01t0927400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:40675141:40677841:-1 gene:Os01g0927400 transcript:Os01t0927400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os01t0927400-01)
Sequence	MGSNVELWCEDILQTKGICAADRSTHDYPNAELGRLSSLEADCNAVAGISNNVPSYAQQT DRSCLDVGDCSNVASSSKTKRTDSCFLADDGFQLPDENHVDKKQKSVCEKDVHCVSSPHV DLDDRFTDPLDNREDELCSITQYDVHNFENDREIVNFAAGQIWAAYDWEKFPRRYARINK IVADKEHLYVSWFKPSPQSHDENRWFSASLPFVCGIFIADECKISVTCPTMLCHQISSDN WNHHLKVYPQEGEVWAIYSDWDIGWCNDPGMRKKSTFYVVEILNSYLKGSGCTVAQLVKV DGYRSVFQRHVRSGREQLLQVHIHNLLMFSHRIPSFRFTCDVGTVFELEHSAVPENLQYE NTSASVAPLYPLQGLHDDSNGFHEVAATHLSNPSTSKMDLGNPQQGMMNYNNKLSPEHFV EGQIWAVYDAPDRMPRLYVRVIRVVSHTAVSVLKLEPHPMLNEEIHWVEDGLPVACGVFR AGSETACKEISEFSHPVECDWSAKRSFYRIFPKKGEIWAMYKNWKIAFSNADIDKCEPRM VEILSDYSDEIGVNVCRLTRVKGCLTFFQRVIVEDFHLTKLISRSEMLSFSHRVPAYVVI EIKDRDIPKGSWHLEPNALPLRNID

Transcript Sequence

Transcript ID	Os01t0927400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:40675141:40677841:-1 gene:Os01g0927400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os01t0927400-01)
Sequence	ATTCCACCTCCAGATTGATTGCCGTGTTCATGCGTAGCCACCGTCCCTAAATCCAAATCG GTGCTAGGGTTTAGGGTTCTCGGAATCGAGCCATCGATTTGAATCCAACCTTCGCCCAAA TCAGTTTGGGTAAGAGCCCGTTCCCAATTTCCTCTCGAATTGAATCCATCCATCCTCACA TCTGCAGCATGGGCTCAAATGTTGAGCTGTGGTGCGAAGACATTTTACAAACGAAAGGGA TTTGCGCTGCTGATAGATCAACTCATGATTATCCGAATGCAGAACTGGGTAGATTAAGCA GCCTTGAGGCAGACTGTAATGCGGTGGCTGGCATCTCAAACAATGTGCCTTCATATGCTC AACAGACTGACAGATCATGTTTGGATGTGGGCGATTGTTCAAATGTTGCTAGCTCTTCCA AAACTAAGAGGACTGATTCATGCTTTCTAGCTGATGATGGTTTTCAGTTACCTGATGAGA ACCATGTTGACAAGAAGCAAAAGAGTGTGTGCGAAAAGGATGTGCATTGTGTGTCATCGC CACATGTAGATTTGGATGACAGGTTTACTGATCCATTGGATAACAGAGAAGACGAGCTTT GCTCTATTACACAATATGACGTTCATAACTTTGAGAATGATAGGGAGATAGTGAATTTCG CTGCTGGTCAGATTTGGGCAGCATATGACTGGGAGAAGTTCCCTCGCAGATATGCACGGA TTAACAAGATTGTGGCTGACAAAGAGCACTTATATGTTTCATGGTTCAAACCATCCCCAC AATCCCATGACGAGAACAGGTGGTTTAGTGCAAGCTTGCCATTTGTTTGTGGAATTTTTA TTGCGGATGAATGTAAAATATCGGTAACTTGTCCAACTATGTTATGTCATCAGATATCTT CTGACAATTGGAATCATCATCTTAAAGTTTATCCCCAGGAAGGGGAGGTATGGGCAATCT ACAGTGATTGGGACATTGGGTGGTGCAATGACCCTGGGATGCGGAAGAAAAGCACCTTTT ATGTTGTAGAAATTCTTAACAGTTATTTAAAAGGCTCAGGCTGCACTGTCGCACAATTGG TAAAGGTAGATGGATATAGAAGCGTTTTCCAGAGGCACGTGAGGAGTGGGAGAGAGCAGT TATTACAAGTCCACATTCATAATCTGCTCATGTTTTCTCACAGGATTCCTTCATTTAGAT TTACTTGTGATGTTGGAACGGTGTTTGAGCTTGAACATTCTGCTGTTCCAGAAAACTTGC AATATGAAAATACATCAGCAAGTGTTGCTCCTTTGTACCCTCTTCAAGGTTTACATGATG ACTCAAATGGTTTTCATGAAGTTGCTGCCACACACTTATCAAATCCTTCAACCAGCAAAA TGGATTTAGGTAACCCCCAACAAGGAATGATGAACTACAATAATAAGTTATCACCTGAGC ATTTTGTGGAGGGGCAGATCTGGGCTGTATATGATGCTCCGGATAGAATGCCAAGGTTGT ATGTCAGAGTAATCCGTGTGGTATCCCATACTGCAGTTTCTGTGTTGAAGCTGGAACCTC ACCCTATGCTCAATGAAGAAATACATTGGGTTGAAGATGGTCTACCAGTTGCTTGTGGGG TGTTTCGAGCTGGTAGTGAGACTGCTTGCAAAGAGATATCAGAATTCTCTCATCCGGTGG AGTGTGACTGGAGCGCAAAGAGGTCTTTCTACCGAATTTTCCCAAAGAAAGGAGAAATAT GGGCAATGTACAAAAACTGGAAGATAGCCTTCAGTAATGCTGACATCGACAAATGTGAAC CTCGCATGGTTGAGATCCTCTCTGATTACTCAGATGAAATTGGAGTCAATGTATGCAGGC TGACTCGGGTAAAAGGCTGTTTAACCTTTTTCCAGAGAGTAATAGTGGAAGATTTCCATT TGACAAAGTTGATTTCAAGGTCTGAAATGCTAAGCTTTTCCCATCGTGTTCCTGCTTATG TAGTTATTGAAATTAAAGACCGTGATATACCAAAAGGGTCATGGCATCTGGAACCAAATG CCCTTCCTCTCAGGAATATAGATTAATATATATGGGAAGTAGCAAAAAATGTTTAGAGTT TTAGATAATTGTAATGACCAGATCTTCTTCTTTCACCCTGTTATTAATAGAATCATTTGC CTCT