Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0925300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:40566683:40569769:-1 gene:Os01g0925300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, DHHC-type domain containing protein. (Os01t0925300-01)
Sequence

ATGAACGGAGCAAGCTCCGGCGGCGGCGGCGGCGCCGGTGCCGGCGGGGATGGGCCGTTG
GTGTACCAGCGCTGGAAAGGGAACAATGTGTTTGTTCTTCAGGGGAGGTTTATATTTGGA
CCCGATGCAAGATCCTTGTACGTCACCATGTTCCTCATCATCGCGCCAGCGTCAATCTTT
TGTTTGTTCGTTGCCAAAGAACTGATGAATAACTTTTCTTATGGTCTGGGATTACCAGTA
ATGATTTCAGCAGTTGTGTTCACGGCATATGACTTGAGCCTTCTACTTCTCACTTCTGGT
AGGGATCCAGGTATAATACCTCGGAATGCACACCCTCCAGAACCTGAAGGTTTGGATGGC
AATGCAGAGGTTGGATCTAACCAGACTCCACCAATGCGTTTGCCCCGAGTGAAGGATGTT
GTTGTCAATGGAATCACTGTGAAGACAAAATACTGTGATACCTGCATGCTGTACCGGCCT
CCTCGTTGCTCCCATTGCTCTATCTGCAACAACTGCGTTGAACGTTTTGACCATCACTGC
CCATGGGTTGGGCAATGCATAGGACTTAGGAATTACAGGTTCTTTTATATGTTTGTCTTC
TCAACAACTCTGCTCTGCCTCTACGTCTTTGGGTTCTGCTGGGTATACATTGTTAAGATC
AGAAACTCTGAGCAGATAACAATATGGAAGGCTATGGCAAAGACCCCTGCTTCTATTGCT
CTGCTAGTCTACACATTTATTGCCGTTTGGTTTGTTGGTGGCCTCTCTGTATTTCACTTG
TATCTCATGAGCACCAACCAGACAACATATGAGAACTTCAGGTATCGGTATGATCAACGG
GCCAACCCATACAACAGGGGAGTCATGGAGAACATTAAAGATATATTCTTCTCTGCAATT
CCTGCCTCCAAGAACAACTTCCGCGCCAGAGTCCCAGTTCCACAGGAGCAAGGTCTGAGG
CCTCGCCCAACCAATGGTTTCATGAGTCCAAACATGGGGAGAGCCGTCGGTGACATTGAG
ATGGGTAGAAAGCCGGTGGCATGGGATGAGCCAAGGATGGCAGCCGATATCGGCGATCTG
GGAGCAGGCCTGGGCAACTTGTTGGAGGACAAGGATGGCAGGTTTCGCAGTGCATCTCCA
GATCTAAGCCGTGACGCCCTCGCAATCGGAGGCCTGGATGATCAAGGATCCTCAGTGATG
AACCCAGGGCGTACAAGCTGGGGAGTTGAGGCAGGTCGATGA

Peptide Sequence

PEP ID

Os01t0925300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:40566683:40569769:-1 gene:Os01g0925300 transcript:Os01t0925300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, DHHC-type domain containing protein. (Os01t0925300-01)
Sequence

MNGASSGGGGGAGAGGDGPLVYQRWKGNNVFVLQGRFIFGPDARSLYVTMFLIIAPASIF
CLFVAKELMNNFSYGLGLPVMISAVVFTAYDLSLLLLTSGRDPGIIPRNAHPPEPEGLDG
NAEVGSNQTPPMRLPRVKDVVVNGITVKTKYCDTCMLYRPPRCSHCSICNNCVERFDHHC
PWVGQCIGLRNYRFFYMFVFSTTLLCLYVFGFCWVYIVKIRNSEQITIWKAMAKTPASIA
LLVYTFIAVWFVGGLSVFHLYLMSTNQTTYENFRYRYDQRANPYNRGVMENIKDIFFSAI
PASKNNFRARVPVPQEQGLRPRPTNGFMSPNMGRAVGDIEMGRKPVAWDEPRMAADIGDL
GAGLGNLLEDKDGRFRSASPDLSRDALAIGGLDDQGSSVMNPGRTSWGVEAGR

Transcript Sequence

Transcript ID

Os01t0925300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:40566683:40569769:-1 gene:Os01g0925300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, DHHC-type domain containing protein. (Os01t0925300-01)
Sequence

TCTCTTTCTTCCTCCTCTCCTCTTCGTGTCTTGCCCTCCGGCATCAGCGGCGGCGGAGTG
GCGGGGTTGCGGCATTGGGAGCTGACGTGGCCGCCGGAGGAGGAGCAAGGCGCGCGGCGC
CGCCGGCCATGTGGTGATCTGGGGGGGCTTGATCCCGCCGGAGTGGTTCTTGGGCTGAGA
GTGCGGCGCCCATGAACGGAGCAAGCTCCGGCGGCGGCGGCGGCGCCGGTGCCGGCGGGG
ATGGGCCGTTGGTGTACCAGCGCTGGAAAGGGAACAATGTGTTTGTTCTTCAGGGGAGGT
TTATATTTGGACCCGATGCAAGATCCTTGTACGTCACCATGTTCCTCATCATCGCGCCAG
CGTCAATCTTTTGTTTGTTCGTTGCCAAAGAACTGATGAATAACTTTTCTTATGGTCTGG
GATTACCAGTAATGATTTCAGCAGTTGTGTTCACGGCATATGACTTGAGCCTTCTACTTC
TCACTTCTGGTAGGGATCCAGGTATAATACCTCGGAATGCACACCCTCCAGAACCTGAAG
GTTTGGATGGCAATGCAGAGGTTGGATCTAACCAGACTCCACCAATGCGTTTGCCCCGAG
TGAAGGATGTTGTTGTCAATGGAATCACTGTGAAGACAAAATACTGTGATACCTGCATGC
TGTACCGGCCTCCTCGTTGCTCCCATTGCTCTATCTGCAACAACTGCGTTGAACGTTTTG
ACCATCACTGCCCATGGGTTGGGCAATGCATAGGACTTAGGAATTACAGGTTCTTTTATA
TGTTTGTCTTCTCAACAACTCTGCTCTGCCTCTACGTCTTTGGGTTCTGCTGGGTATACA
TTGTTAAGATCAGAAACTCTGAGCAGATAACAATATGGAAGGCTATGGCAAAGACCCCTG
CTTCTATTGCTCTGCTAGTCTACACATTTATTGCCGTTTGGTTTGTTGGTGGCCTCTCTG
TATTTCACTTGTATCTCATGAGCACCAACCAGACAACATATGAGAACTTCAGGTATCGGT
ATGATCAACGGGCCAACCCATACAACAGGGGAGTCATGGAGAACATTAAAGATATATTCT
TCTCTGCAATTCCTGCCTCCAAGAACAACTTCCGCGCCAGAGTCCCAGTTCCACAGGAGC
AAGGTCTGAGGCCTCGCCCAACCAATGGTTTCATGAGTCCAAACATGGGGAGAGCCGTCG
GTGACATTGAGATGGGTAGAAAGCCGGTGGCATGGGATGAGCCAAGGATGGCAGCCGATA
TCGGCGATCTGGGAGCAGGCCTGGGCAACTTGTTGGAGGACAAGGATGGCAGGTTTCGCA
GTGCATCTCCAGATCTAAGCCGTGACGCCCTCGCAATCGGAGGCCTGGATGATCAAGGAT
CCTCAGTGATGAACCCAGGGCGTACAAGCTGGGGAGTTGAGGCAGGTCGATGATGACAAT
GTTTAGTTGCCCATGTATGCAGTTATAGTGGAAGACTCAGGGATTTTTAGTGCCGGCTTG
TTGCTAATTTGGTGTTTGGGTTGAGATTTGAGGTCACTGATGTTCTTAGGCCTATGACCT
TGGGTGGTTGTTTTCACATTTCCATTTCTCCTTTTAATTTTCTGTTCCTCCTTATTGTCC
CTTGTATTTCCTGTATCAGTGGTTTGAAGCAGTTGGTTGGTTGTGAGGTATCCAGATTAG
TTCAGTTCTAATTGTGTATGTATATAGCTAGAGCACTGAACTTAAAGGGATTGTTTTACT
TGGCTTTGATGAATGATTGTGAACAAGATTGTATTTTGCAGTGGACAAACGCCACTCACT
TGAGCTGCCATTCC