Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0924400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:40477240:40479093:1 gene:Os01g0924400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 6 description:Similar to Auxin-induced basic helix-loop-helix transcription factor. (Os01t0924400-01)
Sequence	ATGGACCCCAAATTCCCCCCACCCCCACCGCTAAACAAAACGGAGCCCACCACCACCACC ACCAACCAGCAGCATCACCACGATGAGCAGCAGCAGCAGCATCGCCTCCAGATTCAAGTT CATCCTCAGCAGCAGGAGCAGCAGGATGGAGGTGGAGGAGGAGGGAAGGATCAGCAGCAG CAGCAGCAGATGCAGGTGGTGGTTGCGGCGGCGGCGGGGGAGAGGAGGATGCAGGGGCTA GGGCCGAAGCGGAGCTCGAACAAGGACCGCCACACCAAGGTGGACGGGCGGGGGCGGCGG ATCCGGATGCCGGCGCTGTGCGCCGCCCGGATCTTCCAGCTCACGCGGGAGCTCGGCCAC AAGTCCGACGGCGAGACCGTCCAGTGGCTGCTCCAGCAGGCGGAGCCGGCCATCGTCGCC GCCACGGGGACCGGGACCATCCCGGCGTCCGCGCTCGCCTCCGTCGCCCCCTCCCTCCCT TCCCCCAACTCCGCCCTCTCCAGGTCGCACCACCACCACCACCACATGTGGGCGGCAGCG CCGCCCACGGCGTCCGCCGGGTTCGCCGGTGCAGGGTTCTCCGGCGCCGACTCCGGGGTG ATCGGCGGGATCATGCAGCGGATGGGGATCCCCGCCGGGATCGAGCTCCAGGGCGGGGGA GCGGGGGGGTTGGGGGGTGGGGGTGGCGGCGGCGGTGGCCACATCGGGTTCGCGCCCATG TTCGCCAGCCACGCGGCGGCGGCGGCGGCCATGCCGGGGCTAGAGCTAGGGCTCTCGCAG GACGGCCACATCGGCGTGCTCGCCGCGCAGTCGCTCAGCCAGTTCTACCACCAGGTCGGC GCCGCCGGTCAGCTGCAGCACCAGCACCAGCATCACCATCAGCAGCAGCAGCAGCAGCAG GACGGGGAGGACAACCGCGACGACGGCGAGTCCGATGAGGAGTCCGGGCAGTAG

Peptide Sequence

PEP ID	Os01t0924400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:40477240:40479093:1 gene:Os01g0924400 transcript:Os01t0924400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 6 description:Similar to Auxin-induced basic helix-loop-helix transcription factor. (Os01t0924400-01)
Sequence	MDPKFPPPPPLNKTEPTTTTTNQQHHHDEQQQQHRLQIQVHPQQQEQQDGGGGGGKDQQQ QQQMQVVVAAAAGERRMQGLGPKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGH KSDGETVQWLLQQAEPAIVAATGTGTIPASALASVAPSLPSPNSALSRSHHHHHHMWAAA PPTASAGFAGAGFSGADSGVIGGIMQRMGIPAGIELQGGGAGGLGGGGGGGGGHIGFAPM FASHAAAAAAMPGLELGLSQDGHIGVLAAQSLSQFYHQVGAAGQLQHQHQHHHQQQQQQQ DGEDNRDDGESDEESGQ

Transcript Sequence

Transcript ID	Os01t0924400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:40477240:40479093:1 gene:Os01g0924400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 6 description:Similar to Auxin-induced basic helix-loop-helix transcription factor. (Os01t0924400-01)
Sequence	AAGATTTTCTTATTCTTCTTCTTCTCCTCCTCTCTCTTCTCCTCTTCTTGCACCTCCTCA CCTTCTCCTCTCCTCTCCTCTTCTTCTCCATCACCATCCACCCATCCAACTGGTCCAACT CCTCCAATCGTTTGCTTCTTCTTCTTCCTCTTCTCGCTGTTCTTGGTGGAGGAGGAGATT AGGGTTTGATTAGGGTAGATAGAGAGAGAGGGGTTGGGTTTGGTTGGTGTTTGTGTGGAG ATGGACCCCAAATTCCCCCCACCCCCACCGCTAAACAAAACGGAGCCCACCACCACCACC ACCAACCAGCAGCATCACCACGATGAGCAGCAGCAGCAGCATCGCCTCCAGATTCAAGTT CATCCTCAGCAGCAGGAGCAGCAGGATGGAGGTGGAGGAGGAGGGAAGGATCAGCAGCAG CAGCAGCAGATGCAGGTGGTGGTTGCGGCGGCGGCGGGGGAGAGGAGGATGCAGGGGCTA GGGCCGAAGCGGAGCTCGAACAAGGACCGCCACACCAAGGTGGACGGGCGGGGGCGGCGG ATCCGGATGCCGGCGCTGTGCGCCGCCCGGATCTTCCAGCTCACGCGGGAGCTCGGCCAC AAGTCCGACGGCGAGACCGTCCAGTGGCTGCTCCAGCAGGCGGAGCCGGCCATCGTCGCC GCCACGGGGACCGGGACCATCCCGGCGTCCGCGCTCGCCTCCGTCGCCCCCTCCCTCCCT TCCCCCAACTCCGCCCTCTCCAGGTCGCACCACCACCACCACCACATGTGGGCGGCAGCG CCGCCCACGGCGTCCGCCGGGTTCGCCGGTGCAGGGTTCTCCGGCGCCGACTCCGGGGTG ATCGGCGGGATCATGCAGCGGATGGGGATCCCCGCCGGGATCGAGCTCCAGGGCGGGGGA GCGGGGGGGTTGGGGGGTGGGGGTGGCGGCGGCGGTGGCCACATCGGGTTCGCGCCCATG TTCGCCAGCCACGCGGCGGCGGCGGCGGCCATGCCGGGGCTAGAGCTAGGGCTCTCGCAG GACGGCCACATCGGCGTGCTCGCCGCGCAGTCGCTCAGCCAGTTCTACCACCAGGTCGGC GCCGCCGGTCAGCTGCAGCACCAGCACCAGCATCACCATCAGCAGCAGCAGCAGCAGCAG GACGGGGAGGACAACCGCGACGACGGCGAGTCCGATGAGGAGTCCGGGCAGTAGTAGCCG CGCCACCTGAATTTGTTCATCCACGCGTCGTCTCTTCGGAGGAGAAAAGAGAATTCTAGG AAGGACATGCAGCTAATGGAGGGGGGAATGGAATGCTTTTGTTACTGTTGGGTTGTTCTT CATGGGGGTTTTTATGTCTGATTTTTTTTCCTCGTGTGGTGTCGAAGCTCGAAAGAGGCT ACTACTTTGCTCCGGCGACTTGTTGGGATGGATCATGATCATCTTCAGTTGTTACTCCTG CTGCTCCATGGATGGTTGCCGGTTTATCCCCCTCCAAGTGTTTAGGTGAAAGCTCAATAT TTCGCACTCGACAGTCAACACATGACATGATCTTCGAAAGGTTGCTTGATGAGCTTATGT ATCTGTGTTTGTGTTCATTTTTGCAGGTGTATAATAGCCGAGAGCTGGATGGACTGGATC ATCGCTGTCGAGTGAGTGCTTTATTTGTTATTGCAGGTCGTTGTGTAGATATTCAGGTAT TTTTGCAGTTAGAGAGGTCTTCTTTTTTTCCTTTTTACGAGAGTGATGATCCGCTTATGT GCGACAAATACGATGTCCGTCAAACTGATCCTCACCCACGGGCTGTTTCTGCAACGCAAA TATGATGCATATACATTTTTAGAGGCCTGATTTTATATGCTTATTCTTTTGTGG