Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0924200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:40460001:40461062:1 gene:Os01g0924200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0924200-01)
Sequence

ATGGATCCAATCAGCATAGAGAAGATCAGGGCCATGAGCAAGTGCAGCAACTGCAAGAGG
CAGCATCCGATGATCCTCCCTGCCCTGGCAATCTCCATGGTTGCCACCTTTGTTCTTCTC
CTGCTGGTGACCAGCCCTGTCTGGGTCCCAAGGCTGTGCTCACTCATGGCCTTCTTCTTC
CTCACCACCCTCCCTGACCTTGCCATGGCCTTCCTCCTCAGCCCCAAGTGCCTCTTCGTC
GTCGGCAACCTCATCGTCGCCTTCCTCGTCGGCGAGTCTAGGCTCGCCCCGAGGGGGGAG
CCGGCGTCGTCGTCGGTGAATGAGATACATGACGAACATGTTAAGAGGAACGCCGCGATA
AGCGCAAAGGCGGTGACCGCGGTTGTGGCCATTGATCAGAATGCTCATGTTGGAGAATTG
GGGGAAGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGAAGAGGGGGAGGAAGAAGAG
CTGCACCAGAGAGTAGAGGACTTCATTGCAAGGGTCAAGAAGCAGAGGAGAATGGAGGAC
AAGAGCATGTTTGACACTGATCGATGA

Peptide Sequence

PEP ID

Os01t0924200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:40460001:40461062:1 gene:Os01g0924200 transcript:Os01t0924200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0924200-01)
Sequence

MDPISIEKIRAMSKCSNCKRQHPMILPALAISMVATFVLLLLVTSPVWVPRLCSLMAFFF
LTTLPDLAMAFLLSPKCLFVVGNLIVAFLVGESRLAPRGEPASSSVNEIHDEHVKRNAAI
SAKAVTAVVAIDQNAHVGELGEEEEEEEEEEEEEEGEEEELHQRVEDFIARVKKQRRMED
KSMFDTDR

Transcript Sequence

Transcript ID

Os01t0924200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:40460001:40461062:1 gene:Os01g0924200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0924200-01)
Sequence

ATCTCAGTCTCATTGTGCCTTCTTTCTTCTTCTTCTTCTTGAGCTGAGCCTCCTCCTAAG
GCCTCTCTTGTATATACACATTTTGTATAGATTTTTAGAGTTATATCACAGTCTCATCAG
CTCTTGCAACTTCCCATTGCAAGAGTTTGATTGATTGATTGGTTGATCAGCTGGTGTTCC
AAATGGATCCAATCAGCATAGAGAAGATCAGGGCCATGAGCAAGTGCAGCAACTGCAAGA
GGCAGCATCCGATGATCCTCCCTGCCCTGGCAATCTCCATGGTTGCCACCTTTGTTCTTC
TCCTGCTGGTGACCAGCCCTGTCTGGGTCCCAAGGCTGTGCTCACTCATGGCCTTCTTCT
TCCTCACCACCCTCCCTGACCTTGCCATGGCCTTCCTCCTCAGCCCCAAGTGCCTCTTCG
TCGTCGGCAACCTCATCGTCGCCTTCCTCGTCGGCGAGTCTAGGCTCGCCCCGAGGGGGG
AGCCGGCGTCGTCGTCGGTGAATGAGATACATGACGAACATGTTAAGAGGAACGCCGCGA
TAAGCGCAAAGGCGGTGACCGCGGTTGTGGCCATTGATCAGAATGCTCATGTTGGAGAAT
TGGGGGAAGAAGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGAAGAGGGGGAGGAAGAAG
AGCTGCACCAGAGAGTAGAGGACTTCATTGCAAGGGTCAAGAAGCAGAGGAGAATGGAGG
ACAAGAGCATGTTTGACACTGATCGATGACCTGATGAGTTTTACCTTGGATTTGGAAGAT
TCAAAGAAGGGATTATTGCATCCAAATTAAGGATTCTTGTGATGCTTTAGTTTTTCATCT
ATCATCTTAGGGCCAGAGTTAAGAAGAAGAAGAGTTCACTTCACTGGCTCACTGCACTGT
AGGAGATTATGCATGCACCCTTTTGATTAGAGTGTGTCTGATGATCTGATCCGGTTTAGC
CATGCACAAGAATTAGGCAGAGAAAAAAAGAGAGACAAGGAATGTGTGTGTGATCTTTTG
AAAAAGCAGAAAAAGAAAAGTGATGCATGTGTCTTTCTCTTA