Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0924000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:40453863:40455489:1 gene:Os01g0924000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPL27 description:Similar to Chloroplast 50S ribosomal protein L27 (Fragment). (Os01t0924000-01);Similar to 50S ribosomal protein L27, chloroplastic. (Os01t0924000-02)
Sequence	ATGGCGTCCATGGCGTTCACACTGGTGGGAGCATTCAAGGGGATGTCCCTCTCCTCCCCG TGCCATTCCTCCTCCTCCGCCTCCTTCCTCCGCGCTGACCGTGTCTCGCTCTCCGTCGGC GGCGGGGTCGGGATGGGGGTGCCGATGACGATGCCGGTGCGGCGGCTGACGATCCAGATG GCGCACAAGAAGGGGGCCGGGAGCACCAAGAACGGGAGGGACTCCCCCGGGCAGCGCCTC GGTGTCAAGATTTACGGCGACCAGGTCGCCAAGCCCGGCGCCATCATCATCCGCCAGCGC GGCACCAGGGTCTATCCTGGAAATAATGTTGGAATGGGCAAGGATCACACCCTCTTTTCT TTGATCGATGGCCTCGTAAAGTTCGAGAAATATGGACCAGACAAGAAAAAGGTAAGTGTT TACCCATACGAGAAACAACCTGAGAACCCAAACAGTTACAGAGCAAGAAAGAGAGAGTAC TTCCGCATGCAGCGTGAACGCAAAAAGGCAAGAGCAGAGGGAATTGTTGAGGTGCAATTG GTGTTGGCAGCTGCAGATGAAAGTCCTGAGGTCAATGCAGACTGCTGA

Peptide Sequence

PEP ID	Os01t0924000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:40453863:40455489:1 gene:Os01g0924000 transcript:Os01t0924000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPL27 description:Similar to Chloroplast 50S ribosomal protein L27 (Fragment). (Os01t0924000-01);Similar to 50S ribosomal protein L27, chloroplastic. (Os01t0924000-02)
Sequence	MASMAFTLVGAFKGMSLSSPCHSSSSASFLRADRVSLSVGGGVGMGVPMTMPVRRLTIQM AHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIIRQRGTRVYPGNNVGMGKDHTLFS LIDGLVKFEKYGPDKKKVSVYPYEKQPENPNSYRARKREYFRMQRERKKARAEGIVEVQL VLAAADESPEVNADC

Transcript Sequence

Transcript ID	Os01t0924000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:40453863:40455489:1 gene:Os01g0924000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPL27 description:Similar to Chloroplast 50S ribosomal protein L27 (Fragment). (Os01t0924000-01);Similar to 50S ribosomal protein L27, chloroplastic. (Os01t0924000-02)
Sequence	ATCTTCTCTTTCTCTTCTCCTCGCGACTCCGCCGCTGCTCGAGAGCGCAATGGCGTCCAT GGCGTTCACACTGGTGGGAGCATTCAAGGGGATGTCCCTCTCCTCCCCGTGCCATTCCTC CTCCTCCGCCTCCTTCCTCCGCGCTGACCGTGTCTCGCTCTCCGTCGGCGGCGGGGTCGG GATGGGGGTGCCGATGACGATGCCGGTGCGGCGGCTGACGATCCAGATGGCGCACAAGAA GGGGGCCGGGAGCACCAAGAACGGGAGGGACTCCCCCGGGCAGCGCCTCGGTGTCAAGAT TTACGGCGACCAGGTCGCCAAGCCCGGCGCCATCATCATCCGCCAGCGCGGCACCAGGGT CTATCCTGGAAATAATGTTGGAATGGGCAAGGATCACACCCTCTTTTCTTTGATCGATGG CCTCGTAAAGTTCGAGAAATATGGACCAGACAAGAAAAAGGTAAGTGTTTACCCATACGA GAAACAACCTGAGAACCCAAACAGTTACAGAGCAAGAAAGAGAGAGTACTTCCGCATGCA GCGTGAACGCAAAAAGGCAAGAGCAGAGGGAATTGTTGAGGTGCAATTGGTGTTGGCAGC TGCAGATGAAAGTCCTGAGGTCAATGCAGACTGCTGATAAGTTCTCTGCCCCGTTTTTCT CCATTTTCGCAATCCATGTTTGATAACAATGTTTGGAATGTAAATCATCAACTATGAGAT GAATACAAGGCCCATCTTCAACTC