Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0922100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:40285434:40287011:-1 gene:Os01g0922100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0922100-01)
Sequence

ATGGAAGTGTTCGACGAGGCGGCGGTGGTGGTGGCTGCGCCGCCTCCTCCGCAGCCGGAA
TGCGGGGCGGCGGCGGCGGTGGTGGGCGGCGAGCCCGGGTGGTCCTCGCCGTCCCCGGCC
GCGTCGCCGGAGTTCGAGTTCTGGATGGTGGGGAAGAACCCCTCCTCGTTCCAGTCCCCC
GCTCTGCTCACCGCCGACGAGCTCTTCTCCGACGGCATTGTGCTCCCGCTCCGCACCCTC
CAGCAGGTGCCCTCCGGTGAAGGCGACGGCGAAGGTGAGGAGGGCGAGGGCGAGGGCGAT
GCCGCCGCCGTGGAGTCCTCTGATTTGCCGGAGGCGGCGGCGCAGCGGGTCGCGGAGTCC
GGGGGCCCCGCGCCGACGCCGGACCTCCCGGCGGTGACGTTCAAGTGGAAGGACATCTTC
AAGGCGACCGGCGGCGGGGAGTCCAAGGACCGGAAGAAGGTGGAGCGCCGCGTCAGCAGC
GTCGGCGGCAACGGCGAGCTCATCAACATCAACATATGGCCCTTCTCCCGGAGCCGCTCG
GCCGGCCACTCCGCCGCCGGCGCCGGCACCGCGGCGGCGGGAGCGGCCTTGAGCCGCAAC
AAGTCAAATCCCAATGCCAATGTCAACGCCAACGCCAGCAATAACGCCGCCGCCGCAGCC
GCAGCCGCAGCCACCGCACCGGCCGCCGCGACGGCGCCAGGGCCCGCGCCCGCGCGCAAG
GTGAGCAGCGCGCCGTGCTCCCGGAGCAACTCCCGCGGAGAGACCTCCGCCGCCGCGCCG
CCGCCGTCTATTGCCACCGCCGCATGTGCAGCCGCCGCCGCCGCAGCAACCGCCCCGGCG
CCAGCACCCGCCACCTCCATGCTGAGGAGGCTGGTGCCCGGTCATGGACGAACAGGCGCC
CTCACCGTCACCGGCATCCGCCTCGGCCGCGCCAGCCCCGTCTGGCAGCTCAGGCGCAAC
AAGCTGCAGCAGCAAGGCGCCGCGGCCGAGCAGAAGCAGAGCAGCGACACCCCCACCCCC
ACCACCGCCGCCACCAAGAAGAAGGCCACTGCCACCACAACCACAGCAGCAACCCCCACC
ACCCAAGACGTCGACGGCGAGGACAAGGCCGCGGCGAGCGCGACCACGCCAGCGGCGGCG
GCGGCAACCGCCGGTTGCCGGAACAACGCGTCGTGCTCGGAAGCCGGCGGCGAGGAAAGC
AACCCGCCGCAGGGGCTGTTCGGCCTCCGGACCTTCTTCTCCAAGAAGGTGTACTGA

Peptide Sequence

PEP ID

Os01t0922100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:40285434:40287011:-1 gene:Os01g0922100 transcript:Os01t0922100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0922100-01)
Sequence

MEVFDEAAVVVAAPPPPQPECGAAAAVVGGEPGWSSPSPAASPEFEFWMVGKNPSSFQSP
ALLTADELFSDGIVLPLRTLQQVPSGEGDGEGEEGEGEGDAAAVESSDLPEAAAQRVAES
GGPAPTPDLPAVTFKWKDIFKATGGGESKDRKKVERRVSSVGGNGELININIWPFSRSRS
AGHSAAGAGTAAAGAALSRNKSNPNANVNANASNNAAAAAAAAATAPAAATAPGPAPARK
VSSAPCSRSNSRGETSAAAPPPSIATAACAAAAAAATAPAPAPATSMLRRLVPGHGRTGA
LTVTGIRLGRASPVWQLRRNKLQQQGAAAEQKQSSDTPTPTTAATKKKATATTTTAATPT
TQDVDGEDKAAASATTPAAAAATAGCRNNASCSEAGGEESNPPQGLFGLRTFFSKKVY

Transcript Sequence

Transcript ID

Os01t0922100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:40285434:40287011:-1 gene:Os01g0922100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0922100-01)
Sequence

CCCTTTCCTCTCCCCCCTCCTCTCCATTCCCATGGCGTCCATGGCGTCGTCGTGCTGAGT
TCGTCAGAGCTACCTGCTCCTGCTCCTGCTCGGTCCTCACTGCGCTGTCTCTGAGTAGAT
TTGCTTGCGTTCTTTTGAGATGGAAGTGTTCGACGAGGCGGCGGTGGTGGTGGCTGCGCC
GCCTCCTCCGCAGCCGGAATGCGGGGCGGCGGCGGCGGTGGTGGGCGGCGAGCCCGGGTG
GTCCTCGCCGTCCCCGGCCGCGTCGCCGGAGTTCGAGTTCTGGATGGTGGGGAAGAACCC
CTCCTCGTTCCAGTCCCCCGCTCTGCTCACCGCCGACGAGCTCTTCTCCGACGGCATTGT
GCTCCCGCTCCGCACCCTCCAGCAGGTGCCCTCCGGTGAAGGCGACGGCGAAGGTGAGGA
GGGCGAGGGCGAGGGCGATGCCGCCGCCGTGGAGTCCTCTGATTTGCCGGAGGCGGCGGC
GCAGCGGGTCGCGGAGTCCGGGGGCCCCGCGCCGACGCCGGACCTCCCGGCGGTGACGTT
CAAGTGGAAGGACATCTTCAAGGCGACCGGCGGCGGGGAGTCCAAGGACCGGAAGAAGGT
GGAGCGCCGCGTCAGCAGCGTCGGCGGCAACGGCGAGCTCATCAACATCAACATATGGCC
CTTCTCCCGGAGCCGCTCGGCCGGCCACTCCGCCGCCGGCGCCGGCACCGCGGCGGCGGG
AGCGGCCTTGAGCCGCAACAAGTCAAATCCCAATGCCAATGTCAACGCCAACGCCAGCAA
TAACGCCGCCGCCGCAGCCGCAGCCGCAGCCACCGCACCGGCCGCCGCGACGGCGCCAGG
GCCCGCGCCCGCGCGCAAGGTGAGCAGCGCGCCGTGCTCCCGGAGCAACTCCCGCGGAGA
GACCTCCGCCGCCGCGCCGCCGCCGTCTATTGCCACCGCCGCATGTGCAGCCGCCGCCGC
CGCAGCAACCGCCCCGGCGCCAGCACCCGCCACCTCCATGCTGAGGAGGCTGGTGCCCGG
TCATGGACGAACAGGCGCCCTCACCGTCACCGGCATCCGCCTCGGCCGCGCCAGCCCCGT
CTGGCAGCTCAGGCGCAACAAGCTGCAGCAGCAAGGCGCCGCGGCCGAGCAGAAGCAGAG
CAGCGACACCCCCACCCCCACCACCGCCGCCACCAAGAAGAAGGCCACTGCCACCACAAC
CACAGCAGCAACCCCCACCACCCAAGACGTCGACGGCGAGGACAAGGCCGCGGCGAGCGC
GACCACGCCAGCGGCGGCGGCGGCAACCGCCGGTTGCCGGAACAACGCGTCGTGCTCGGA
AGCCGGCGGCGAGGAAAGCAACCCGCCGCAGGGGCTGTTCGGCCTCCGGACCTTCTTCTC
CAAGAAGGTGTACTGATTGCGATTCGTCCACGTTTATTTTTGTACATAGCATTCGAGCTA
TAGCTTACTCCATAGCTGCTGGCTCATTCAATTCACATCTCCTCCTCCTCCCCTTTCACT
TCGATTCAGCAAGAGTAGCTTTTAGCTTTTCTTTCTTCTTCTCCATTGTACTTCTACTAA
TCTACTGCTCCTTCTACT