Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0921800-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:40256826:40258624:-1 gene:Os01g0921800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 52 description:Tetratricopeptide-like helical domain containing protein. (Os01t0921800-00)
Sequence	ATGAGGACGAGGAGTGGATCTCTCTACCGCAGCGGCGGCGGCGGCGGGGAGACGGCCATG GTTGGGCAGAAGAGGAAGAGGTCGTCGTTGCCGCCGCAGTACGCCACCGCCGGTGACTGC TGCGGCGGAGGAGGCCGCCGGAAGAGGCTGGCCGGTGGTGGCCCGGATTACCTCGACGAG CTCCCCGACGACCTCGTCCTCGCCGTGCTCTCCAAGCTCGCCGCCTCCGCCTCCTCCCCT TCCGACCTCCTCTCCGTTCACCTCACGTGCAAGAGGCTGAATGGGCTGGGGCGCCATGAC ATGGTCTTCGCAAAGGCCTCGCCGGCGTCGCTCGCCGTCAAGGCGGCGTCGTGGTCGGAG CCCGTGCAGCGATTCCTCAAGCTCTGCGCCGACGCCGGCAACCTCGAGGCCTGCTACATT CTCGGCATGATTCGGTTCTACTGTCTTGGCAACCGGAGCGGCGGCGCGGCGCTGCTGGCG AGGGCGGCGGTCGGCGGGCACGCGGCGGCGCTCTACTCGCTGGCGGTTATCCAGTTCAAC GGGAGCGGCGGCGCCAAGTCGGACCGCGACCTCCGCGCCGGGGCGGCGCTGTGCGCGCGC GCCGCCGCGCTGGGGCACGTCGACGCGCTCCGCGAGCTCGGGCACTGCCTCCAGGACGGC TACGGCGTGCGCCGCGACCCCGCCGAGGGCCGCCGCTTCCTCGTCGCCGCCAACGCGCGG GAGCTCACGCTCGCGCTCGCCGCCGCGGCGTCGCACCGCCCCTTCGCCGCCCTCCCCCTC GCCGGCGGCGCCGCCGCCGGCGCCATCGGCTGCCCGCTCCTCTCCGACTTCGGGTGGAGC CTCCCGGAGGCGGAGCCCCACCCGGCCAACCTCTTCATGGCCGACTGGTGGGCGTCCCGC GGCGTGCAGGCGACGGCCAAGAAACCCGGCCTCGAGGCTCCCGCTGCCGCCACCGGCGAC AGCGACGGCGGCGGCGAGCTCCGCCTCTGCTCCCACGTGCGGTGCGGCCGGAGGGAGACC CGCCGCCACGAGTTCCGGCGGTGCTCCGTCTGCGGCGCGGCCAACTACTGCTCCCGCGCG TGCCAGGCGCTGGACTGGAAGCGCGCGCACAAGGCGCAGTGCGTGCCCATGGACCGGTGG CTCCTCGCCGCCGGCGAGGCCCAGTGA

Peptide Sequence

PEP ID	Os01t0921800-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:40256826:40258624:-1 gene:Os01g0921800 transcript:Os01t0921800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 52 description:Tetratricopeptide-like helical domain containing protein. (Os01t0921800-00)
Sequence	MRTRSGSLYRSGGGGGETAMVGQKRKRSSLPPQYATAGDCCGGGGRRKRLAGGGPDYLDE LPDDLVLAVLSKLAASASSPSDLLSVHLTCKRLNGLGRHDMVFAKASPASLAVKAASWSE PVQRFLKLCADAGNLEACYILGMIRFYCLGNRSGGAALLARAAVGGHAAALYSLAVIQFN GSGGAKSDRDLRAGAALCARAAALGHVDALRELGHCLQDGYGVRRDPAEGRRFLVAANAR ELTLALAAAASHRPFAALPLAGGAAAGAIGCPLLSDFGWSLPEAEPHPANLFMADWWASR GVQATAKKPGLEAPAAATGDSDGGGELRLCSHVRCGRRETRRHEFRRCSVCGAANYCSRA CQALDWKRAHKAQCVPMDRWLLAAGEAQ

Transcript Sequence

Transcript ID	Os01t0921800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:40256826:40258624:-1 gene:Os01g0921800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 52 description:Tetratricopeptide-like helical domain containing protein. (Os01t0921800-00)
Sequence	CTCGCTCTCCACCGCTCGCCGCGCACGCCTCACCGGAGACCAGCCCGACGGCGGCGGCGG CGGCGTCGGCGGCAGCAGCGGGAGCTTGGACTGAGATGAGGACGAGGAGTGGATCTCTCT ACCGCAGCGGCGGCGGCGGCGGGGAGACGGCCATGGTTGGGCAGAAGAGGAAGAGGTCGT CGTTGCCGCCGCAGTACGCCACCGCCGGTGACTGCTGCGGCGGAGGAGGCCGCCGGAAGA GGCTGGCCGGTGGTGGCCCGGATTACCTCGACGAGCTCCCCGACGACCTCGTCCTCGCCG TGCTCTCCAAGCTCGCCGCCTCCGCCTCCTCCCCTTCCGACCTCCTCTCCGTTCACCTCA CGTGCAAGAGGCTGAATGGGCTGGGGCGCCATGACATGGTCTTCGCAAAGGCCTCGCCGG CGTCGCTCGCCGTCAAGGCGGCGTCGTGGTCGGAGCCCGTGCAGCGATTCCTCAAGCTCT GCGCCGACGCCGGCAACCTCGAGGCCTGCTACATTCTCGGCATGATTCGGTTCTACTGTC TTGGCAACCGGAGCGGCGGCGCGGCGCTGCTGGCGAGGGCGGCGGTCGGCGGGCACGCGG CGGCGCTCTACTCGCTGGCGGTTATCCAGTTCAACGGGAGCGGCGGCGCCAAGTCGGACC GCGACCTCCGCGCCGGGGCGGCGCTGTGCGCGCGCGCCGCCGCGCTGGGGCACGTCGACG CGCTCCGCGAGCTCGGGCACTGCCTCCAGGACGGCTACGGCGTGCGCCGCGACCCCGCCG AGGGCCGCCGCTTCCTCGTCGCCGCCAACGCGCGGGAGCTCACGCTCGCGCTCGCCGCCG CGGCGTCGCACCGCCCCTTCGCCGCCCTCCCCCTCGCCGGCGGCGCCGCCGCCGGCGCCA TCGGCTGCCCGCTCCTCTCCGACTTCGGGTGGAGCCTCCCGGAGGCGGAGCCCCACCCGG CCAACCTCTTCATGGCCGACTGGTGGGCGTCCCGCGGCGTGCAGGCGACGGCCAAGAAAC CCGGCCTCGAGGCTCCCGCTGCCGCCACCGGCGACAGCGACGGCGGCGGCGAGCTCCGCC TCTGCTCCCACGTGCGGTGCGGCCGGAGGGAGACCCGCCGCCACGAGTTCCGGCGGTGCT CCGTCTGCGGCGCGGCCAACTACTGCTCCCGCGCGTGCCAGGCGCTGGACTGGAAGCGCG CGCACAAGGCGCAGTGCGTGCCCATGGACCGGTGGCTCCTCGCCGCCGGCGAGGCCCAGT GACTCGCCGCCGCCGCCAACTACTCCCTTAGACCAATCGGTCCACCGGTTTAACGCTGGA CCGGGTGTAGCCAAGGCAAGTGGCAGAGAGAAAAAATTGAGGAAGCTTTTTTTTTCTTTT TTTTTCTTTTTTACCGTTTCCATCGATGTCGTCTTGTCAGATGTACGTATTCCACTAGGG AAGAAGAGGGTAGAGATGCTAC