Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0921100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:40215071:40216944:1 gene:Os01g0921100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0921100-01)
Sequence

ATGCGAGGAAGTGCAGGCATGGCGAGCTCCAAGAATGGCCTATCTCCGGTGGTCGTCTTC
CTCCTCGGCGCGGCGTCGGCCACCGCGCTGATCGTCTTCGTCTTCACCTCGACCGCGAGT
CCCGCGTGGCCGACGCCGGAGGCAACTCCGGCGACAAGGCAGGAGAAGAAGGCTGCCGCC
GTGGCTTGCGCTCCACGGGCGAAAGGGATAGATTCAGAGACGCGCAGAGCAGCAAGAACT
AATCAGACCGGCGGTGGGGACGACGACGACGAGTTCGCGAGGATGGTGCGGCGGGCGGCG
ATGGAGGACAGGACGGTGATCATGACGTCGGTGAACGAGGCGTGGGCGGCGCCGGGGTCG
CTGATGGACTCGTTCCTGGAGAGCTTCAGGGTGGGGGAGAACATCTCGCATTTCGTCGAG
CACATCGTGGTGGTGGCCATGGACGAGGGCGCGCTCCGGCGGTGCCGCGCCATCCACCCG
CACTGCTACCTGCTGCTCCCGGAGGTCGCCGGCCTCGACCTCTCCGGCGCCAAGAGCTAC
ATGACCAAGGACTACCTCGACCTCGTCTGGAGCAAGCTCAAGCTGCAGCAGCGCGTCCTC
GAGCTCGGCTACAACCTCCTCTTCACGGACGTTGACCTGGCGTGGTTCAGGAACCCGATG
GTGCACATCACGGCGGCGGCGGACATCACGACGTCGAGCGACTTCTACTTCGGCGACCCG
GACGACCTGGGGAACTACCCGAACACCGGGTTCATCTACTTCAAGGCCACGCCGCGCAAC
GCGCGCGCCATGGCGTACTGGCACGCGGCGCGGCGCCGGTTCCCCGGGGAGCACGACCAG
TTCGTCTTCAACGAGATCAAGCGGGAGCTCGCCGCCGGCGCAGGCGAGGGCGGCGGCGTC
GGCGTGAGGATCAGGTTCATCGACACGGCGGCGGTGAGCGGGTTCTGCCAGCTGGGGCGG
GACCTGAACCGCATCGCGACCGTGCACATGACGTGCTGCATCGGGCTGGAGAACAAGCTG
CACGACCTGAGGAACGTGATCCGGGACTGGAGGAGGTACGTGGCGCGGCCGCGGTGGGAG
CGGCAGATGGGCAAGATCGGCTGGACGTTCGAGGGCGGCAAGTGCATACACTGA

Peptide Sequence

PEP ID

Os01t0921100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:40215071:40216944:1 gene:Os01g0921100 transcript:Os01t0921100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0921100-01)
Sequence

MRGSAGMASSKNGLSPVVVFLLGAASATALIVFVFTSTASPAWPTPEATPATRQEKKAAA
VACAPRAKGIDSETRRAARTNQTGGGDDDDEFARMVRRAAMEDRTVIMTSVNEAWAAPGS
LMDSFLESFRVGENISHFVEHIVVVAMDEGALRRCRAIHPHCYLLLPEVAGLDLSGAKSY
MTKDYLDLVWSKLKLQQRVLELGYNLLFTDVDLAWFRNPMVHITAAADITTSSDFYFGDP
DDLGNYPNTGFIYFKATPRNARAMAYWHAARRRFPGEHDQFVFNEIKRELAAGAGEGGGV
GVRIRFIDTAAVSGFCQLGRDLNRIATVHMTCCIGLENKLHDLRNVIRDWRRYVARPRWE
RQMGKIGWTFEGGKCIH

Transcript Sequence

Transcript ID

Os01t0921100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:40215071:40216944:1 gene:Os01g0921100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0921100-01)
Sequence

GAGTTTTTGCTCATGCGAGGAAGTGCAGGCATGGCGAGCTCCAAGAATGGCCTATCTCCG
GTGGTCGTCTTCCTCCTCGGCGCGGCGTCGGCCACCGCGCTGATCGTCTTCGTCTTCACC
TCGACCGCGAGTCCCGCGTGGCCGACGCCGGAGGCAACTCCGGCGACAAGGCAGGAGAAG
AAGGCTGCCGCCGTGGCTTGCGCTCCACGGGCGAAAGGGATAGATTCAGAGACGCGCAGA
GCAGCAAGAACTAATCAGACCGGCGGTGGGGACGACGACGACGAGTTCGCGAGGATGGTG
CGGCGGGCGGCGATGGAGGACAGGACGGTGATCATGACGTCGGTGAACGAGGCGTGGGCG
GCGCCGGGGTCGCTGATGGACTCGTTCCTGGAGAGCTTCAGGGTGGGGGAGAACATCTCG
CATTTCGTCGAGCACATCGTGGTGGTGGCCATGGACGAGGGCGCGCTCCGGCGGTGCCGC
GCCATCCACCCGCACTGCTACCTGCTGCTCCCGGAGGTCGCCGGCCTCGACCTCTCCGGC
GCCAAGAGCTACATGACCAAGGACTACCTCGACCTCGTCTGGAGCAAGCTCAAGCTGCAG
CAGCGCGTCCTCGAGCTCGGCTACAACCTCCTCTTCACGGACGTTGACCTGGCGTGGTTC
AGGAACCCGATGGTGCACATCACGGCGGCGGCGGACATCACGACGTCGAGCGACTTCTAC
TTCGGCGACCCGGACGACCTGGGGAACTACCCGAACACCGGGTTCATCTACTTCAAGGCC
ACGCCGCGCAACGCGCGCGCCATGGCGTACTGGCACGCGGCGCGGCGCCGGTTCCCCGGG
GAGCACGACCAGTTCGTCTTCAACGAGATCAAGCGGGAGCTCGCCGCCGGCGCAGGCGAG
GGCGGCGGCGTCGGCGTGAGGATCAGGTTCATCGACACGGCGGCGGTGAGCGGGTTCTGC
CAGCTGGGGCGGGACCTGAACCGCATCGCGACCGTGCACATGACGTGCTGCATCGGGCTG
GAGAACAAGCTGCACGACCTGAGGAACGTGATCCGGGACTGGAGGAGGTACGTGGCGCGG
CCGCGGTGGGAGCGGCAGATGGGCAAGATCGGCTGGACGTTCGAGGGCGGCAAGTGCATA
CACTGATTCGTGCTGACAAAGCTAAGCTAAATAATCGCTCCGTTTCAGGTTATAAGATGG
GTTAAACCTTCGTTAAAGTCAAACTGCTACAGGCTTAACTAAATATATAGATAAATATAG
AAATATTTCATTATCAAATTAGTTTCATTAAATTAATAATTAAATATATTTTTATAATAA
ATTTATCTTGGATCGAAAATATTACTATTTTTTTTATAAACTCGGTTAATTTGAAGTCTT
ATAATCTGAAATAGAGGTCGTAGATTTTAATATTGCTCGGGGTTATACTTGAATCGTGCT
CGAGGTTTGATTGCCCTGGAGAATTGGGATGGCATGTGGGACGGACGGTGGAGGATCGAT
GGATGGAAGGAAGAAGCCTCTCCCCATGTTGTTCGTTCAATTTCATCTCTGTTTGTTCAT
ATCTCAGGGAGTAGTATTAGTTCTGAACACATTAAATTGATGTACTATAGTTTGCACATG
GGGGTGATTTCGCCAATAATCAATATGACACTCTCTGGAGACTGGAGCCATTC