Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0920100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:40167809:40170157:1 gene:Os01g0920100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0920100-01)
Sequence

ATGGGTTCTTGCGCTTCGGTTCACAAGGACCTCGGGTTCCCCAAGAAGCTGTTTCTTGCG
TCGTCGCCTACCAAGGAGAAGAAGGCCGCGAACGGGAAGGGTGGCGGTGGCGGTGTGTCT
GTTGATCTCAAGCGAAAGGAGCAGCAGCAGGCGGCGGCGGCAGGGGTTGGCGTCAGGAGC
CCCGGTTCTGGTAGCAAGGATGAAATGTTCTTTGACTCGCGGGCATGGTTAGATTCTGAT
TGCGAGGACGACTTCTACAGTGTGAATGGAGATTTTACTCCGTCTCGTGGCAGCACTCCA
AACTACCAACCCAGAACACAAACAGTTATGAGCAATGTCTTTGTACCTGATAATGTACAG
AATTCCAAATCACCTGAACCTTCTCCAACTGGAAGGAGAAAACTAGCCGAGCTCTTGCAG
GAGGCGATGCAGAATGGTTCCGAAGATAGCACCGATGCATCTGTTCCAGACATCAGCAAG
AATGAGAAGCAGCAATTCCAGCCTGTTTCTGCAGCTGTGAAGCCAGTATCTGAGTCCAGC
TCCACGTGTAGCACAGAACCGACGCCGATCAGAGAAGCGAAGAATCGCAAGGAGAAGGCG
TGGTACACCGGTCGCTGTTGCTTGCCGGCTTTTGTTCATACCCTAGACTTAGATGAGAGG
AGGCAGAAGATGACCCCTGGGCCTTGTGCTGTTTGA

Peptide Sequence

PEP ID

Os01t0920100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:40167809:40170157:1 gene:Os01g0920100 transcript:Os01t0920100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0920100-01)
Sequence

MGSCASVHKDLGFPKKLFLASSPTKEKKAANGKGGGGGVSVDLKRKEQQQAAAAGVGVRS
PGSGSKDEMFFDSRAWLDSDCEDDFYSVNGDFTPSRGSTPNYQPRTQTVMSNVFVPDNVQ
NSKSPEPSPTGRRKLAELLQEAMQNGSEDSTDASVPDISKNEKQQFQPVSAAVKPVSESS
STCSTEPTPIREAKNRKEKAWYTGRCCLPAFVHTLDLDERRQKMTPGPCAV

Transcript Sequence

Transcript ID

Os01t0920100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:40167809:40170157:1 gene:Os01g0920100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0920100-01)
Sequence

AGAACTCTCTCCTCTCTCTCTCTACTCTTCTCTTCTCTCTCCTTTTGTTGCTTCCATTTC
TCGTTCTTGCACGGGGAAGAGGAGAGAAAGATGTGTGTCGCTGTGGTTTGAAAAAGGTTG
GGTGTGAGAGGAGAGAGAAAGTGGAGTGGAGGGGAGAGAGAGAGAGAGAGATGGGTTCTT
GCGCTTCGGTTCACAAGGACCTCGGGTTCCCCAAGAAGCTGTTTCTTGCGTCGTCGCCTA
CCAAGGAGAAGAAGGCCGCGAACGGGAAGGGTGGCGGTGGCGGTGTGTCTGTTGATCTCA
AGCGAAAGGAGCAGCAGCAGGCGGCGGCGGCAGGGGTTGGCGTCAGGAGCCCCGGTTCTG
GTAGCAAGGATGAAATGTTCTTTGACTCGCGGGCATGGTTAGATTCTGATTGCGAGGACG
ACTTCTACAGTGTGAATGGAGATTTTACTCCGTCTCGTGGCAGCACTCCAAACTACCAAC
CCAGAACACAAACAGTTATGAGCAATGTCTTTGTACCTGATAATGTACAGAATTCCAAAT
CACCTGAACCTTCTCCAACTGGAAGGAGAAAACTAGCCGAGCTCTTGCAGGAGGCGATGC
AGAATGGTTCCGAAGATAGCACCGATGCATCTGTTCCAGACATCAGCAAGAATGAGAAGC
AGCAATTCCAGCCTGTTTCTGCAGCTGTGAAGCCAGTATCTGAGTCCAGCTCCACGTGTA
GCACAGAACCGACGCCGATCAGAGAAGCGAAGAATCGCAAGGAGAAGGCGTGGTACACCG
GTCGCTGTTGCTTGCCGGCTTTTGTTCATACCCTAGACTTAGATGAGAGGAGGCAGAAGA
TGACCCCTGGGCCTTGTGCTGTTTGACATGGCTGCTTCCCTTCTATGAGCTGTATCTACA
ATATACTACCTGATCCGGCCCTGAGTTCACTGTAAAGAAGACTAGTATTGAGAGCACTAT
ATCCTTGTAATAATCAAGTGAATAGTCACTCTTGAGAATTCATGTGCTGTATCCATGTTA
AATCAACTGTAAGGTGAGGATATCTAGCTCAAGAAATGATCATTTTGTGCATATCTGGAT
GAATCTTTATGGATATAAAATTTTCTC