Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0919900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:40146818:40150808:-1 gene:Os01g0919900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:fatty-acid desaturase OsSSI2 description:Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase). (Os01t0919900-01);Similar to Acyl-desaturase. (Os01t0919900-02)
Sequence	ATGGCGTCGAGGATGGCGCTCCGGCCCAACGACGTCACGCTCCGCCTCACCCCGCCCCTC GCCGCCGCCGCGCGGCGCAACCGCCGCGCCGCCGCCGGCGGTGTCAGGGTCTACGCCGTC GCGTCCGGGGCCGTCTCCACCAAGGTTGAGAACAAGAAGCCATTTGCTCCTCCACGAGAG GTGCACGTCCAGGTTACACATTCCATGCCACCCCAGAAGATTGAAATATTCAAGTCTCTT GATGATTGGGCCAGAGATAATATTTTGTCCCACCTTAAGCCTGTCGAGAAATGTTGGCAA CCACAGGATTTTCTTCCTGATCCAGCCTCAGATGGGTTTCATGATGAAGTCAAAGAACTT AGAGAACGTGCCAAGGAAATTCCTGATGATTATTTTGTTTGTTTGGTTGGAGACATGATT ACGGAGGAAGCTCTTCCTACGTACCAGACTATGCTTAACACTCTCGATGGTGTCCGAGAT GAAACAGGTGCAAGCCCCACTGCCTGGGCTGTTTGGACAAGGGCATGGACTGCTGAGGAG AACAGGCATGGTGACCTCCTGAACAAATATCTCTACCTCACTGGTAGGGTGGACATGAGA CAAATTGAGAAGACAATTCAGTATCTTATTGGCTCTGGAATGGACCCTAGGACAGAGAAC AATCCTTATCTTGGATTCATCTACACCTCCTTCCAAGAGCGTGCGACCTTCATCTCACAT GGGAACACTGCTCGCCATGCCAAAGACTTTGGCGACCTAAAACTTGCACAGATCTGTGGC ATCATCGCCTCAGATGAGAAGCGTCATGAGACTGCATACACCAAGATTGTTGAGAAGCTG TTTGAGATTGACCCTGATGGCACTGTGCTTGCTTTTGCTGACATGATGAAGAAGAAGATC TCGATGCCTGCCCACCTGATGTTCGATGGGGAGGATGATAAGCTCTTTGAGCACTTCTCC ATGGTTGCACAGAGGCTTGGTGTTTACACCGCCAAGGACTACGCCGACATCCTTGAGTTC CTCGTTAGCAGGTGGAAGATATCTGACCTGACTGGCCTATCTAGCGAGGGAAACAAGGCG CAAGACTACCTTTGCACCCTTGCTGCTAGGATCAGAAGGCTGGATGAGAGGGCACAATCG AGAGCCAAGAAAGCTGGTACATTGCCTTTCAGCTGGGTATATGGTAGGGAAGTTCAACTC TGA

Peptide Sequence

PEP ID	Os01t0919900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:40146818:40150808:-1 gene:Os01g0919900 transcript:Os01t0919900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:fatty-acid desaturase OsSSI2 description:Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase). (Os01t0919900-01);Similar to Acyl-desaturase. (Os01t0919900-02)
Sequence	MASRMALRPNDVTLRLTPPLAAAARRNRRAAAGGVRVYAVASGAVSTKVENKKPFAPPRE VHVQVTHSMPPQKIEIFKSLDDWARDNILSHLKPVEKCWQPQDFLPDPASDGFHDEVKEL RERAKEIPDDYFVCLVGDMITEEALPTYQTMLNTLDGVRDETGASPTAWAVWTRAWTAEE NRHGDLLNKYLYLTGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISH GNTARHAKDFGDLKLAQICGIIASDEKRHETAYTKIVEKLFEIDPDGTVLAFADMMKKKI SMPAHLMFDGEDDKLFEHFSMVAQRLGVYTAKDYADILEFLVSRWKISDLTGLSSEGNKA QDYLCTLAARIRRLDERAQSRAKKAGTLPFSWVYGREVQL

Transcript Sequence

Transcript ID	Os01t0919900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:40146818:40150808:-1 gene:Os01g0919900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:fatty-acid desaturase OsSSI2 description:Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase). (Os01t0919900-01);Similar to Acyl-desaturase. (Os01t0919900-02)
Sequence	ACACCCCCATCCCCTCTCTCCGCGCCTCGCCTCGCCACCCGCATCGCCATCTCGCACCGC CACCTCCTCCACTCTCGGCGGCGGGGGCCTCATCGATGGCGTCGAGGATGGCGCTCCGGC CCAACGACGTCACGCTCCGCCTCACCCCGCCCCTCGCCGCCGCCGCGCGGCGCAACCGCC GCGCCGCCGCCGGCGGTGTCAGGGTCTACGCCGTCGCGTCCGGGGCCGTCTCCACCAAGG TTGAGAACAAGAAGCCATTTGCTCCTCCACGAGAGGTGCACGTCCAGGTTACACATTCCA TGCCACCCCAGAAGATTGAAATATTCAAGTCTCTTGATGATTGGGCCAGAGATAATATTT TGTCCCACCTTAAGCCTGTCGAGAAATGTTGGCAACCACAGGATTTTCTTCCTGATCCAG CCTCAGATGGGTTTCATGATGAAGTCAAAGAACTTAGAGAACGTGCCAAGGAAATTCCTG ATGATTATTTTGTTTGTTTGGTTGGAGACATGATTACGGAGGAAGCTCTTCCTACGTACC AGACTATGCTTAACACTCTCGATGGTGTCCGAGATGAAACAGGTGCAAGCCCCACTGCCT GGGCTGTTTGGACAAGGGCATGGACTGCTGAGGAGAACAGGCATGGTGACCTCCTGAACA AATATCTCTACCTCACTGGTAGGGTGGACATGAGACAAATTGAGAAGACAATTCAGTATC TTATTGGCTCTGGAATGGACCCTAGGACAGAGAACAATCCTTATCTTGGATTCATCTACA CCTCCTTCCAAGAGCGTGCGACCTTCATCTCACATGGGAACACTGCTCGCCATGCCAAAG ACTTTGGCGACCTAAAACTTGCACAGATCTGTGGCATCATCGCCTCAGATGAGAAGCGTC ATGAGACTGCATACACCAAGATTGTTGAGAAGCTGTTTGAGATTGACCCTGATGGCACTG TGCTTGCTTTTGCTGACATGATGAAGAAGAAGATCTCGATGCCTGCCCACCTGATGTTCG ATGGGGAGGATGATAAGCTCTTTGAGCACTTCTCCATGGTTGCACAGAGGCTTGGTGTTT ACACCGCCAAGGACTACGCCGACATCCTTGAGTTCCTCGTTAGCAGGTGGAAGATATCTG ACCTGACTGGCCTATCTAGCGAGGGAAACAAGGCGCAAGACTACCTTTGCACCCTTGCTG CTAGGATCAGAAGGCTGGATGAGAGGGCACAATCGAGAGCCAAGAAAGCTGGTACATTGC CTTTCAGCTGGGTATATGGTAGGGAAGTTCAACTCTGAGCATCAGACGCCATTGCGACTT CTTCGAGCTCCAGTGTTACTACTGTCCGTGCTTGTCGAGACACATTTTGAGAACAATACC AGGTGTGTCTTGCTACATAGTTCTTCAGGTTGACCAAATGAACTGAGGGCATATGTTCGT GGTATCTTTGCTTAGAGTGATAGAGAGATTTGCGTCTGTGTTTTAGCTCTTTTTTTCTTT TCTGCCTTTTCATGTACAACTTCTGGCCGTGTGGATTGGACATGTACTGAACGTGAGTCT GTCGTTGGCCGTGTCAATCTGCTCGTGTGTTTAAACTGGCTGCTGTTCAGGTCTGAAAAT TTTGTG