Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0919800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:40136226:40142760:-1 gene:Os01g0919800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 5A description:Similar to Efflux carrier of polar auxin transport. (Os01t0919800-01)
Sequence	ATGATAGGGTGGGGAGACGTGTACAAGGTGGTGGCGGCGACGGTGCCGCTCTACTTCGCG CTGTTCCTGGGCTACGGGTCGGTGAGGTGGTGGCGGATCTTCACGAGGGAGCAGTGCGAC GCCGTGAACCGGCTCGTCGCCTTCTTCGCGCTCCCCTTCTTCACCTTCGAGTTCACCCTC CACACCGACCCGTTCCAGGTGAACTACCGCGCCGTCGCCGCCGACGTGATCTCGAAGGCG GTCATCGTCGCCGTCATCGGCGCCTGGGCGCGGTTCATGAGCAAGGGCGGCTGCGCCGTG AGCTGGTCCATCACCAGCTTCTCGCTGTCCACGCTCACCAACTCGCTTGTCGTCGGCGTG CCCATGGCGCGCGCCATGTACGGCGAGTGGGCGCAGCAGCTCGTCGTCCAGCTCTCCGTC TTCCAGGCCATTGTCTGGCTCACGCTGCTGCTCTTCGTGCTCGAGGTCAGGAAGGCCGCC ATCGGGATGTACGTCGACGGCGCCGAGGCGGCGGCGGCGGCCGGCAAGGACGTCGAGGCC GCCGGCGCCGCCGCCGCCGCAGGCACGGTCGTCGTCGCCGCCGCCGCGGGCAAGCCGTCG CTGTGGGCGCTGGTGAAAGTGGTGGCGCACAAGCTGGCGCGCAACCCCAACACTTACGCC AGCTTCGTCGGCATCACCTGGGCCTGCCTCGCCAATAGGTTACACATCGCGTTGCCGAGC GCCTTCGAGGGATCGGTGCTGATCATGTCCAAGTCAGGCACAGGAATGGCCATGTTCAGC ATGGGATTGTTCATGGCGCAGCAGGAGAAGATCATCGCGTGCGGGACGAGCTTTGCGGCG CTGGGGCTGGTGCTAAAGTTCGCGCTCGGCCCCGCCGCCATGGCCATCGGCTCCATCGCC GTCGGCCTCCGCGGCGACGTCCTCCGCGTCGCCATCATACAGGCAGCCCTACCTCAATCC ATCACATCATTCATATTTGCGAAAGAATACGGGCTGCATGCTGATGTGCTCAGTACTGCG GTGATTTTTGGAATGCTTGTCTCCCTACCCTTGTTAGTCGGATTTTACATAGTTTTAGAG CTAATTAGGTAG

Peptide Sequence

PEP ID	Os01t0919800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:40136226:40142760:-1 gene:Os01g0919800 transcript:Os01t0919800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 5A description:Similar to Efflux carrier of polar auxin transport. (Os01t0919800-01)
Sequence	MIGWGDVYKVVAATVPLYFALFLGYGSVRWWRIFTREQCDAVNRLVAFFALPFFTFEFTL HTDPFQVNYRAVAADVISKAVIVAVIGAWARFMSKGGCAVSWSITSFSLSTLTNSLVVGV PMARAMYGEWAQQLVVQLSVFQAIVWLTLLLFVLEVRKAAIGMYVDGAEAAAAAGKDVEA AGAAAAAGTVVVAAAAGKPSLWALVKVVAHKLARNPNTYASFVGITWACLANRLHIALPS AFEGSVLIMSKSGTGMAMFSMGLFMAQQEKIIACGTSFAALGLVLKFALGPAAMAIGSIA VGLRGDVLRVAIIQAALPQSITSFIFAKEYGLHADVLSTAVIFGMLVSLPLLVGFYIVLE LIR

Transcript Sequence

Transcript ID	Os01t0919800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:40136226:40142760:-1 gene:Os01g0919800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 5A description:Similar to Efflux carrier of polar auxin transport. (Os01t0919800-01)
Sequence	CAGCGATCAACCGCATTACACTTGGTTAATTAATTAATTCTCCATTAGCAGCTAGCTAGG GTTCTAGGGTTAATTTAGTTGATCAGTTCGCCGGAACCGGAGAAGAAGAAGAAGATGATA GGGTGGGGAGACGTGTACAAGGTGGTGGCGGCGACGGTGCCGCTCTACTTCGCGCTGTTC CTGGGCTACGGGTCGGTGAGGTGGTGGCGGATCTTCACGAGGGAGCAGTGCGACGCCGTG AACCGGCTCGTCGCCTTCTTCGCGCTCCCCTTCTTCACCTTCGAGTTCACCCTCCACACC GACCCGTTCCAGGTGAACTACCGCGCCGTCGCCGCCGACGTGATCTCGAAGGCGGTCATC GTCGCCGTCATCGGCGCCTGGGCGCGGTTCATGAGCAAGGGCGGCTGCGCCGTGAGCTGG TCCATCACCAGCTTCTCGCTGTCCACGCTCACCAACTCGCTTGTCGTCGGCGTGCCCATG GCGCGCGCCATGTACGGCGAGTGGGCGCAGCAGCTCGTCGTCCAGCTCTCCGTCTTCCAG GCCATTGTCTGGCTCACGCTGCTGCTCTTCGTGCTCGAGGTCAGGAAGGCCGCCATCGGG ATGTACGTCGACGGCGCCGAGGCGGCGGCGGCGGCCGGCAAGGACGTCGAGGCCGCCGGC GCCGCCGCCGCCGCAGGCACGGTCGTCGTCGCCGCCGCCGCGGGCAAGCCGTCGCTGTGG GCGCTGGTGAAAGTGGTGGCGCACAAGCTGGCGCGCAACCCCAACACTTACGCCAGCTTC GTCGGCATCACCTGGGCCTGCCTCGCCAATAGGTTACACATCGCGTTGCCGAGCGCCTTC GAGGGATCGGTGCTGATCATGTCCAAGTCAGGCACAGGAATGGCCATGTTCAGCATGGGA TTGTTCATGGCGCAGCAGGAGAAGATCATCGCGTGCGGGACGAGCTTTGCGGCGCTGGGG CTGGTGCTAAAGTTCGCGCTCGGCCCCGCCGCCATGGCCATCGGCTCCATCGCCGTCGGC CTCCGCGGCGACGTCCTCCGCGTCGCCATCATACAGGCAGCCCTACCTCAATCCATCACA TCATTCATATTTGCGAAAGAATACGGGCTGCATGCTGATGTGCTCAGTACTGCGGTGATT TTTGGAATGCTTGTCTCCCTACCCTTGTTAGTCGGATTTTACATAGTTTTAGAGCTAATT AGGTAGACGCAGAGCCAATGGTACATCAGGAAAACATAGTTTTTCCTTGAGAATTCCAAA ACATACATACTGACAACAAATGTTGCAAAATATCTCCTGCCAACATTCCTCATTGCATAA AACTGTAATGGGAGTATCGAGTTCTATGGAATACTTTTAACACGTTATGTAACAAGAATG TATACTTATTCTGTTATTCAAAAGAATGTGTTACAGT