Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0919400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:40101744:40106898:-1 gene:Os01g0919400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCROSE PHOSPHATE SYNTHASE description:Sucrose phosphate synthase, Sucrose synthesis in pollen germination (Os01t0919400-01)
Sequence	ATGGCGGGGAACGAGTGGATCAATGGCTACCTGGAGGCGATACTGGACAGCGGCGGCGCG GCGGGGGGAGGTGGAGGCGGCGGAGGAGGTGGTGGTGGAGGTGGAGGTGGCGGTGGAGGT GGAGGGGGAGGGGGAGTCGACCCGAGGTCGCCGGCGGCGGGGGCGGCGAGCCCGCGTGGC CCGCACATGAACTTCAATCCGACGCACTACTTCGTGGAGGAGGTGGTGAAGGGCGTCGAC GAGAGCGACCTCCACCGGACGTGGATCAAGGTCGTCGCCACCCGCAACGCCCGCGAGCGG AGCACCCGCCTCGAGAACATGTGCTGGCGCATCTGGCACCTCGCGAGAAAGAAGAAGCAG CTGGAGCTTGAGGGAATCCTGAGGATTTCTGCACGGAGGAAGGAGCAGGAGCAGGTGCGC CGCGAGACTTCGGAGGACCTTGCAGAGGATCTGTTTGAAGGCGAGAAGGCGGACACCGTC GGTGAATTGGCACAGCAAGACACTCCCATGAAGAAGAAGTTCCAGAGGAACTTCTCAGAG CTCACCGTCAGCTGGTCCGACGAGAACAAGGAGAAAAAGCTGTACATTGTGCTCATCAGT CTTCATGGTCTAGTTCGTGGCGATAACATGGAACTTGGTCGGGATTCAGATACTGGAGGA CAGGTGAAATATGTTGTTGAACTCGCAAGAGCACTTGCAATGATGCCTGGCGTGTACAGA GTGGATCTGTTTACTCGTCAAGTGTCATCTCCTGAAGTGGACTGGAGCTATGGGGAGCCT ACTGAAATGTTAACCTCCGGTTCCACTGACGGAGAGGGAAGCGGTGAGAGTGCTGGTGCG TACATTGTGCGCATTCCGTGCGGTCCAAGGGACAAGTACCTCCGTAAAGAGGCCCTGTGG CCTTACCTCCAAGAGTTTGTCGACGGAGCTCTCGCGCATATCCTGAACATGTCCAAGGCT CTGGGGGAACAGGTTAGCAATGGGAAGCTGGTCTTGCCATATGTAATCCATGGCCACTAT GCCGATGCTGGAGATGTCGCTGCTCTTCTTTCTGGTGCGCTGAATGTGCCGATGGTTCTC ACCGGTCATTCACTTGGGAGGAACAAGCTGGAGCAGATCATGAAGCAAGGGCGCATGTCG AAGGAGGAGATTGACTCAACTTACAAGATCATGAGGCGCATTGAGGGTGAGGAGCTGGCC TTGGATGCAGCGGAGCTTGTCATAACGAGTACAAGGCAGGAGATTGATGAGCAATGGGGA CTGTATGATGGCTTTGATGTCAAGCTAGAGAAAGTTTTGAGGGCTCGTGCGAGGCGCGGA GTTAGCTGCCACGGCCGTTTTATGCCTAGAATGGTGGTAATTCCTCCTGGGATGGATTTC AGCAGTGTTGTGGTTCCTGAAGATACCAGCGATGGAGATGATGGCAAAGACTTTGAGATT GCCTCGCCGAGGTCACTGCCCCCAATCTGGGCTGAGGTGATGCGGTTTTTGACCAATCCC CACAAGCCAATGATTCTGGCTCTGTCAAGACCTGATCCAAAGAAGAACATCACCACCCTT GTCAAAGCATTTGGAGAATGTCGCCCACTGAGGGAACTTGCAAACCTAATTCTGATCATG GGGAACAGGGATGACATCGATGAGATGTCCGCTGGCAATGCAAGCGTCCTCACCACTGTC CTGAAGCTGATCGACAAGTATGATCTGTACGGAAGTGTTGCATTCCCCAAGCATCACAAG CAGTCAGACGTACCGGAGATTTATCGCCTCACAGGGAAGATGAAGGGCGTCTTCATCAAT CCTGCTCTTGTTGAGCCTTTCGGTCTCACCCTGATCGAGGCTGCGGCTCACGGTCTCCCG ATCGTCGCCACCAAGAACGGCGGTCCGGTTGACATTAAAAATGCTCTGAACAATGGACTG CTGGTAGACCCGCATGACCAGCACGCCATTGCCGACGCGCTGCTGAAGCTGGTGGCGGAC AAGAACCTGTGGCAGGAGTGCCGGAAGAACGGCCTGCGCAACATCCAGCTCTACTCGTGG CCGGAGCATTGCCGGACATACCTCACCAGGATAGCCGGATGCCGGATCAGGAACCCGCGC TGGCTGATGGACACGCCGGCGGACGCGGCCGCCGAGGAGGAGGAAGCCCTGGAGGACTCG CTCATGGACGTCCAGGACCTCTCGCTGCGCCTGTCCATCGACGGCGAGCGGGGGTCATCC ATGAACGACGCGCCATCGTCGGACCCGCAGGACTCGGTGCAGAGGATCATGAACAAGATC AAGCGGTCGTCTCCCGCGGACACGGACGGCGCCAAGATTCCGGCCGAAGCGGCCGCCACC GCCACCTCCGGTGCCATGAACAAGTACCCGCTCCTCCGCCGACGCCGCAGGCTGTTCGTC ATAGCCGTGGACTGCTACGGCGACGATGGCAGCGCCAGCAAGAGGATGCTGCAGGTGATC CAGGAGGTGTTCAGGGCTGTCCGGTCGGACTCCCAGATGTCCAGGATCTCCGGGTTCGCG CTGTCGACGGCGATGCCGCTGCCGGAGACGCTCAAGCTTCTGCAGCTGGGCAAGATCCCA CCGACCGACTTCGACGCGCTCATCTGCGGCAGCGGCAGCGAGGTGTACTACCCCAGCACG GCGCAGTGTGTGGACGCCGGGGGGAGGCTGCGCCCCGACCAGGACTACCTGCTGCACATC AACCACCGGTGGTCTCACGACGGCGCCAAGCAGACCATTGCCAAGCTCGCGCACGACGGA TCCGGCACCAATGTCGAACCGGACGTGGAGTCCTGCAACCCCCACTGTGTCTCCTTCTTC ATCAAAGACCCCAATAAGGTGAGGACGATCGATGAGATGCGGGAGAGGGTGAGGATGCGT GGCCTCCGATGCCATCTCATGTACTGCAGGAATGCAACAAGGCTTCAAGTTGTTCCTCTT CTAGCATCGAGGTCACAAGCACTCAGGTATCTTTTCGTACGCTGGGGCCTGTCTGTGGGA AACATGTATCTGATCGTCGGGGAGCACGGCGACACCGATCACGAGGAGATGCTGTCAGGG TTACACAAGACGGTGATCATCCGCGGCGTCACCGAGAAGGGCTCGGAGCAGCTGGTGAGG AGCTCAGGGAGTTACCAGAGGGAAGATGTTGTCCCATCCGAGAGCCCCTTGATTGCTTTC ACAAAGGGTGATCTGAAGGCCGATGAGATCATGCGTGCTCTCAAGGAGGTCACCAAGGCT GCCAGTGGCATGTAA

Peptide Sequence

PEP ID	Os01t0919400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:40101744:40106898:-1 gene:Os01g0919400 transcript:Os01t0919400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCROSE PHOSPHATE SYNTHASE description:Sucrose phosphate synthase, Sucrose synthesis in pollen germination (Os01t0919400-01)
Sequence	MAGNEWINGYLEAILDSGGAAGGGGGGGGGGGGGGGGGGGGGGGGVDPRSPAAGAASPRG PHMNFNPTHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQ LELEGILRISARRKEQEQVRRETSEDLAEDLFEGEKADTVGELAQQDTPMKKKFQRNFSE LTVSWSDENKEKKLYIVLISLHGLVRGDNMELGRDSDTGGQVKYVVELARALAMMPGVYR VDLFTRQVSSPEVDWSYGEPTEMLTSGSTDGEGSGESAGAYIVRIPCGPRDKYLRKEALW PYLQEFVDGALAHILNMSKALGEQVSNGKLVLPYVIHGHYADAGDVAALLSGALNVPMVL TGHSLGRNKLEQIMKQGRMSKEEIDSTYKIMRRIEGEELALDAAELVITSTRQEIDEQWG LYDGFDVKLEKVLRARARRGVSCHGRFMPRMVVIPPGMDFSSVVVPEDTSDGDDGKDFEI ASPRSLPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLILIM GNRDDIDEMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHKQSDVPEIYRLTGKMKGVFIN PALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPHDQHAIADALLKLVAD KNLWQECRKNGLRNIQLYSWPEHCRTYLTRIAGCRIRNPRWLMDTPADAAAEEEEALEDS LMDVQDLSLRLSIDGERGSSMNDAPSSDPQDSVQRIMNKIKRSSPADTDGAKIPAEAAAT ATSGAMNKYPLLRRRRRLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFA LSTAMPLPETLKLLQLGKIPPTDFDALICGSGSEVYYPSTAQCVDAGGRLRPDQDYLLHI NHRWSHDGAKQTIAKLAHDGSGTNVEPDVESCNPHCVSFFIKDPNKVRTIDEMRERVRMR GLRCHLMYCRNATRLQVVPLLASRSQALRYLFVRWGLSVGNMYLIVGEHGDTDHEEMLSG LHKTVIIRGVTEKGSEQLVRSSGSYQREDVVPSESPLIAFTKGDLKADEIMRALKEVTKA ASGM

Transcript Sequence

Transcript ID	Os01t0919400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:40101744:40106898:-1 gene:Os01g0919400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCROSE PHOSPHATE SYNTHASE description:Sucrose phosphate synthase, Sucrose synthesis in pollen germination (Os01t0919400-01)
Sequence	ATGGCGGGGAACGAGTGGATCAATGGCTACCTGGAGGCGATACTGGACAGCGGCGGCGCG GCGGGGGGAGGTGGAGGCGGCGGAGGAGGTGGTGGTGGAGGTGGAGGTGGCGGTGGAGGT GGAGGGGGAGGGGGAGTCGACCCGAGGTCGCCGGCGGCGGGGGCGGCGAGCCCGCGTGGC CCGCACATGAACTTCAATCCGACGCACTACTTCGTGGAGGAGGTGGTGAAGGGCGTCGAC GAGAGCGACCTCCACCGGACGTGGATCAAGGTCGTCGCCACCCGCAACGCCCGCGAGCGG AGCACCCGCCTCGAGAACATGTGCTGGCGCATCTGGCACCTCGCGAGAAAGAAGAAGCAG CTGGAGCTTGAGGGAATCCTGAGGATTTCTGCACGGAGGAAGGAGCAGGAGCAGGTGCGC CGCGAGACTTCGGAGGACCTTGCAGAGGATCTGTTTGAAGGCGAGAAGGCGGACACCGTC GGTGAATTGGCACAGCAAGACACTCCCATGAAGAAGAAGTTCCAGAGGAACTTCTCAGAG CTCACCGTCAGCTGGTCCGACGAGAACAAGGAGAAAAAGCTGTACATTGTGCTCATCAGT CTTCATGGTCTAGTTCGTGGCGATAACATGGAACTTGGTCGGGATTCAGATACTGGAGGA CAGGTGAAATATGTTGTTGAACTCGCAAGAGCACTTGCAATGATGCCTGGCGTGTACAGA GTGGATCTGTTTACTCGTCAAGTGTCATCTCCTGAAGTGGACTGGAGCTATGGGGAGCCT ACTGAAATGTTAACCTCCGGTTCCACTGACGGAGAGGGAAGCGGTGAGAGTGCTGGTGCG TACATTGTGCGCATTCCGTGCGGTCCAAGGGACAAGTACCTCCGTAAAGAGGCCCTGTGG CCTTACCTCCAAGAGTTTGTCGACGGAGCTCTCGCGCATATCCTGAACATGTCCAAGGCT CTGGGGGAACAGGTTAGCAATGGGAAGCTGGTCTTGCCATATGTAATCCATGGCCACTAT GCCGATGCTGGAGATGTCGCTGCTCTTCTTTCTGGTGCGCTGAATGTGCCGATGGTTCTC ACCGGTCATTCACTTGGGAGGAACAAGCTGGAGCAGATCATGAAGCAAGGGCGCATGTCG AAGGAGGAGATTGACTCAACTTACAAGATCATGAGGCGCATTGAGGGTGAGGAGCTGGCC TTGGATGCAGCGGAGCTTGTCATAACGAGTACAAGGCAGGAGATTGATGAGCAATGGGGA CTGTATGATGGCTTTGATGTCAAGCTAGAGAAAGTTTTGAGGGCTCGTGCGAGGCGCGGA GTTAGCTGCCACGGCCGTTTTATGCCTAGAATGGTGGTAATTCCTCCTGGGATGGATTTC AGCAGTGTTGTGGTTCCTGAAGATACCAGCGATGGAGATGATGGCAAAGACTTTGAGATT GCCTCGCCGAGGTCACTGCCCCCAATCTGGGCTGAGGTGATGCGGTTTTTGACCAATCCC CACAAGCCAATGATTCTGGCTCTGTCAAGACCTGATCCAAAGAAGAACATCACCACCCTT GTCAAAGCATTTGGAGAATGTCGCCCACTGAGGGAACTTGCAAACCTAATTCTGATCATG GGGAACAGGGATGACATCGATGAGATGTCCGCTGGCAATGCAAGCGTCCTCACCACTGTC CTGAAGCTGATCGACAAGTATGATCTGTACGGAAGTGTTGCATTCCCCAAGCATCACAAG CAGTCAGACGTACCGGAGATTTATCGCCTCACAGGGAAGATGAAGGGCGTCTTCATCAAT CCTGCTCTTGTTGAGCCTTTCGGTCTCACCCTGATCGAGGCTGCGGCTCACGGTCTCCCG ATCGTCGCCACCAAGAACGGCGGTCCGGTTGACATTAAAAATGCTCTGAACAATGGACTG CTGGTAGACCCGCATGACCAGCACGCCATTGCCGACGCGCTGCTGAAGCTGGTGGCGGAC AAGAACCTGTGGCAGGAGTGCCGGAAGAACGGCCTGCGCAACATCCAGCTCTACTCGTGG CCGGAGCATTGCCGGACATACCTCACCAGGATAGCCGGATGCCGGATCAGGAACCCGCGC TGGCTGATGGACACGCCGGCGGACGCGGCCGCCGAGGAGGAGGAAGCCCTGGAGGACTCG CTCATGGACGTCCAGGACCTCTCGCTGCGCCTGTCCATCGACGGCGAGCGGGGGTCATCC ATGAACGACGCGCCATCGTCGGACCCGCAGGACTCGGTGCAGAGGATCATGAACAAGATC AAGCGGTCGTCTCCCGCGGACACGGACGGCGCCAAGATTCCGGCCGAAGCGGCCGCCACC GCCACCTCCGGTGCCATGAACAAGTACCCGCTCCTCCGCCGACGCCGCAGGCTGTTCGTC ATAGCCGTGGACTGCTACGGCGACGATGGCAGCGCCAGCAAGAGGATGCTGCAGGTGATC CAGGAGGTGTTCAGGGCTGTCCGGTCGGACTCCCAGATGTCCAGGATCTCCGGGTTCGCG CTGTCGACGGCGATGCCGCTGCCGGAGACGCTCAAGCTTCTGCAGCTGGGCAAGATCCCA CCGACCGACTTCGACGCGCTCATCTGCGGCAGCGGCAGCGAGGTGTACTACCCCAGCACG GCGCAGTGTGTGGACGCCGGGGGGAGGCTGCGCCCCGACCAGGACTACCTGCTGCACATC AACCACCGGTGGTCTCACGACGGCGCCAAGCAGACCATTGCCAAGCTCGCGCACGACGGA TCCGGCACCAATGTCGAACCGGACGTGGAGTCCTGCAACCCCCACTGTGTCTCCTTCTTC ATCAAAGACCCCAATAAGGTGAGGACGATCGATGAGATGCGGGAGAGGGTGAGGATGCGT GGCCTCCGATGCCATCTCATGTACTGCAGGAATGCAACAAGGCTTCAAGTTGTTCCTCTT CTAGCATCGAGGTCACAAGCACTCAGGTATCTTTTCGTACGCTGGGGCCTGTCTGTGGGA AACATGTATCTGATCGTCGGGGAGCACGGCGACACCGATCACGAGGAGATGCTGTCAGGG TTACACAAGACGGTGATCATCCGCGGCGTCACCGAGAAGGGCTCGGAGCAGCTGGTGAGG AGCTCAGGGAGTTACCAGAGGGAAGATGTTGTCCCATCCGAGAGCCCCTTGATTGCTTTC ACAAAGGGTGATCTGAAGGCCGATGAGATCATGCGTGCTCTCAAGGAGGTCACCAAGGCT GCCAGTGGCATGTAA