Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0918100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:40056074:40059404:-1 gene:Os01g0918100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0918100-01)
Sequence

ATGGAATTCGGGGGCGCCATTGATGATCAGAGTGAAATGTGGGGATGGCAAAGTCAGGAG
TATGATCTGCAGAAAGATTTGCTTGCTGAAGAAGCTGCAGATCCATCTAGCTGTTTGTGG
AGTGAAGCAAATCAGAATGCCGGTGATGCTTGGACCATGTTTGATGAGCAAACTCCAATA
AAACATTGTACAGACATAGATTTTCAGTTCTGTGATATAGGAGATATCATTGTCAAGGAT
TTTGATGAAGGAAAGGAAACTTTACAAGCTAAACGAAGACGCATGCTGCAGTTCTGTTCA
GACAATGTTGAGATGGATTGTGCTATGGCAGCAGATGGACTATCGGAAAATCTTCAATTG
AATTTGGGTTTCTCTGGTGATCAGTGTTTATTAAACTGTGATGGGACAGAGGAACTACCA
GAAGAATGGCTAGTAGATTGTTCACCACAAGAGAGTGAGCCTCAATGCCCGCCTGAAGAT
ATGTCCGTTCATTTGAGTAGTCCTGCTGTGGCCATGGAAGAAGCCAATCTTTCCGTGCAC
AAAAATTCTTCGTCTCGGGAGCAGGGCAACACAGTCCAGAAGAACACTGTGCAAGCTCGA
CCAACACCTCTGAAAGCTGGAAAAAATATTATTAGAGCAAGAAAGGTGAAAACATCAGTC
GTCTATCCTTTCGAGCTTATCAAGCCATGCGGTTTTCATGGTGATGTCACATTGCATGAT
ATCAATCAGAGGATCCACGCCCCGCCCCCATACAAGATAAAGCACAAGATCGACGAGGAG
CAGCTCTCCTATCAGACTTCAGCTATTTCCGGGAAGCCTGTAGTCCACAAGACAAAGATT
CATACAGAAGGAGGAAAGGGCAGTATCACAATCACAAGAACTAGAGGTTAA

Peptide Sequence

PEP ID

Os01t0918100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:40056074:40059404:-1 gene:Os01g0918100 transcript:Os01t0918100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0918100-01)
Sequence

MEFGGAIDDQSEMWGWQSQEYDLQKDLLAEEAADPSSCLWSEANQNAGDAWTMFDEQTPI
KHCTDIDFQFCDIGDIIVKDFDEGKETLQAKRRRMLQFCSDNVEMDCAMAADGLSENLQL
NLGFSGDQCLLNCDGTEELPEEWLVDCSPQESEPQCPPEDMSVHLSSPAVAMEEANLSVH
KNSSSREQGNTVQKNTVQARPTPLKAGKNIIRARKVKTSVVYPFELIKPCGFHGDVTLHD
INQRIHAPPPYKIKHKIDEEQLSYQTSAISGKPVVHKTKIHTEGGKGSITITRTRG

Transcript Sequence

Transcript ID

Os01t0918100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:40056074:40059404:-1 gene:Os01g0918100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0918100-01)
Sequence

GAAAGAAACTGCAAACTGCCCACTGCCCACTCCCTCCTCTCCGGTCTCCATCTCCCAGTT
TCTTCTTCCTCTCCGCTCTCTCCGCTGCTCTCGTCCCGTCTCTGTCCGGATTGCTCCGAT
TTCTTGCTCTTTACACCTGTCCATGGCGGGGTGAGTGGAGAGCGCGAATCTTGGATCCAA
CCCTTCGCGTTCTTGCTCGGCGAGGATGGAATTCGGGGGCGCCATTGATGATCAGAGTGA
AATGTGGGGATGGCAAAGTCAGGAGTATGATCTGCAGAAAGATTTGCTTGCTGAAGAAGC
TGCAGATCCATCTAGCTGTTTGTGGAGTGAAGCAAATCAGAATGCCGGTGATGCTTGGAC
CATGTTTGATGAGCAAACTCCAATAAAACATTGTACAGACATAGATTTTCAGTTCTGTGA
TATAGGAGATATCATTGTCAAGGATTTTGATGAAGGAAAGGAAACTTTACAAGCTAAACG
AAGACGCATGCTGCAGTTCTGTTCAGACAATGTTGAGATGGATTGTGCTATGGCAGCAGA
TGGACTATCGGAAAATCTTCAATTGAATTTGGGTTTCTCTGGTGATCAGTGTTTATTAAA
CTGTGATGGGACAGAGGAACTACCAGAAGAATGGCTAGTAGATTGTTCACCACAAGAGAG
TGAGCCTCAATGCCCGCCTGAAGATATGTCCGTTCATTTGAGTAGTCCTGCTGTGGCCAT
GGAAGAAGCCAATCTTTCCGTGCACAAAAATTCTTCGTCTCGGGAGCAGGGCAACACAGT
CCAGAAGAACACTGTGCAAGCTCGACCAACACCTCTGAAAGCTGGAAAAAATATTATTAG
AGCAAGAAAGGTGAAAACATCAGTCGTCTATCCTTTCGAGCTTATCAAGCCATGCGGTTT
TCATGGTGATGTCACATTGCATGATATCAATCAGAGGATCCACGCCCCGCCCCCATACAA
GATAAAGCACAAGATCGACGAGGAGCAGCTCTCCTATCAGACTTCAGCTATTTCCGGGAA
GCCTGTAGTCCACAAGACAAAGATTCATACAGAAGGAGGAAAGGGCAGTATCACAATCAC
AAGAACTAGAGGTTAATTAGGTCAATGGTATGCATATATGGTGCCAATATGGTCCTTGTA
CCATGCATTTCTGATATATTGGGTTGTGTCAATGTTTTGTGGCCAAGGAAATGCATGCCC
TTGTTGGAATATTGTTAGCCATTTTTTTTTCACTTTATTTCTTCCATTGTCCCCCCTTCG
GAACTTCTTTGCCTGTACTTGCTTGGTTAGTGTGAGATAGTATGATAATAGAGTGTGTAG
GCAGGGTGTGGCAGTGGCAAAGTGTGCTGCTTTTTTGGTTCTTGGTTGAAGGGGGAAAGT
TGATGTAATCAGATAAGTCAGTAATTGTGGACATATTGGTTTGGTGAGATTATATTTTGC