Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0916300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:39938822:39944886:-1 gene:Os01g0916300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PQBP-1 protein (Nuclear protein containing a WW domain) (Npw38) (JM26 protein). (Os01t0916300-01);Similar to protein binding protein. (Os01t0916300-02);Similar to protein binding protein. (Os01t0916300-03)
Sequence	ATGGATAACTCACACGAACAGCCATTACCCCCTGGTGTCGGGGCATGGCCGCCGCCACCT TCCATTCATCCTGCAAAATTTCAACCTAATCCACAACCCACCATGCCTTTCCCTAACATG GATGCTGGGGGTGCACAATCAAATCAGACAGCTCATGAAGTTTCCAACCATAATGATAGT GCAGCAGACATTGAATCTGCTGTCCAAGAGGCTGTTCTTCGTGAACAGGACATTGAGACT CAGCAAGTCATACAAAATCAAAGACAAGCAAAAGCAACAATTGAGCCTACGCAGTATGGA GAAGACCTCCTTTCAAACCGCCGCAACCCTAATGCATTGAAGGAGCACTTACTAAAAATG ACAGCCGAGCATCGTGCAGAGATGGCAAACAAAAGGGGGAAGCCGCTTCATGCAGATAAT GGCAATGTTGAAATTGGCAATGGCTATGGTGTACCAGGAGGGGGTGCTTATTATGCTGCA AACATGTCAAGTGGTCAAATGAATAAACCCAAGGATATAGCTGATAAAGCAAAAGGTGCC GATGATCTCCCTGAATTTTTGAGGCAGAGATTAAGAGCAAGGGGTATTCTTAAAGATGAG GCGACAAATAATAGATTCACGATTAAACAAAATGTCGATTCTCCAGTAGGGCAGATAAAA GCTGCCCAAGAGTTGCCTCCTGGTTGGGTTGAAGCAAAAGATCCAACAAGTGGTGCTTCT TATTTCTATAATCAGAGCACTGGAACGACCCAATGGGATCGCCCTGGTGCTCCTTTGAAC ACCATGCAACATCAAGCTCCTCCATCCTCGTCCTTGCCAGAGAATTGGGAGGAGGCACTT GATCAATCAACAGGCCAGAAATACTATTACAATACAAATACACAAGCAACACAGTGGGAG CCGCCTACTGCTGTGAACCCAGGTGTTGCGCCTCATGCTCCCACCAATGCTGCTGTTGAG ATGGCTGCTCAAAATACAGATATTTGGAACTCTCAAATGCAGAGATGTTTAGGCTGTGGT GGATGGGGTGTAGGTCTTGTCCAGCCATGGGGTTATTGCAATCACTGCACAAGGGTTCAA AATCTTCCTTTTCAACAGTATCCATCCTACCCAAACAATACTACACACTCAAGCAGTAAC AAAAATCCAGGGAATGTAGCAGCCAAGGACAGATCAAGCGCAAAACCTCCATTTGGCAAA GCAAACAGAAAAGATCACCGCAAAAGAAATCGCCCTGAGGATGATGAGCTTGACCCGATG GACCCAAGCTCTTACTCAGATGCTCCACGGGGTGGCTGGGTTGTTGGCTTGAAGGGTGTG CAGCCACGGGCAGCAGATACTACTGCAGCTGGACCTTTATTCCAACAAAGACCATATCCG TCACCTGGTGCTGTGCTGAGAAAAAATGCAGAGGTTGCATCTCATGGCAAGAAACGTGGT ATGGCTCCGATCACCAAAAGAGGGGATGGCAGTGACGGTCTCGGGGAGGCGGATTAG

Peptide Sequence

PEP ID	Os01t0916300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:39938822:39944886:-1 gene:Os01g0916300 transcript:Os01t0916300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PQBP-1 protein (Nuclear protein containing a WW domain) (Npw38) (JM26 protein). (Os01t0916300-01);Similar to protein binding protein. (Os01t0916300-02);Similar to protein binding protein. (Os01t0916300-03)
Sequence	MDNSHEQPLPPGVGAWPPPPSIHPAKFQPNPQPTMPFPNMDAGGAQSNQTAHEVSNHNDS AADIESAVQEAVLREQDIETQQVIQNQRQAKATIEPTQYGEDLLSNRRNPNALKEHLLKM TAEHRAEMANKRGKPLHADNGNVEIGNGYGVPGGGAYYAANMSSGQMNKPKDIADKAKGA DDLPEFLRQRLRARGILKDEATNNRFTIKQNVDSPVGQIKAAQELPPGWVEAKDPTSGAS YFYNQSTGTTQWDRPGAPLNTMQHQAPPSSSLPENWEEALDQSTGQKYYYNTNTQATQWE PPTAVNPGVAPHAPTNAAVEMAAQNTDIWNSQMQRCLGCGGWGVGLVQPWGYCNHCTRVQ NLPFQQYPSYPNNTTHSSSNKNPGNVAAKDRSSAKPPFGKANRKDHRKRNRPEDDELDPM DPSSYSDAPRGGWVVGLKGVQPRAADTTAAGPLFQQRPYPSPGAVLRKNAEVASHGKKRG MAPITKRGDGSDGLGEAD

Transcript Sequence

Transcript ID	Os01t0916300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:39938822:39944886:-1 gene:Os01g0916300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PQBP-1 protein (Nuclear protein containing a WW domain) (Npw38) (JM26 protein). (Os01t0916300-01);Similar to protein binding protein. (Os01t0916300-02);Similar to protein binding protein. (Os01t0916300-03)
Sequence	GATCCCTGTTTTGGACTTGGAATTTCACTAGAGCACCGGCGGCGTGGTTGCGGGCGGCGG CGCTGGTTCGGCTCCTTCGCTCGGCTCGGCTCCGCCACCGCGCCGGAGGCTAGGGTTCTG CGAGGCGGGAGGCGTACGCGGCGGCGGCGACAGTCGACGGAGCTTCCGGAGCAGGAGAGC TCCGACGGCGCACGCTCCTGCGGCTCCTCCTGCTTCCCGTCCAATCTCGCGACGCCCCCC GGGCAGATTCGAGGACGACCGGAGGCGGCGAACGGCGACCCCCCCGCCGGATACCGGCAG ACTAGGTTTTCTTTGTTAGCATAAGCTTGTGAAAATTTAGCTTGTTTCTTACTTATGGAT AACTCACACGAACAGCCATTACCCCCTGGTGTCGGGGCATGGCCGCCGCCACCTTCCATT CATCCTGCAAAATTTCAACCTAATCCACAACCCACCATGCCTTTCCCTAACATGGATGCT GGGGGTGCACAATCAAATCAGACAGCTCATGAAGTTTCCAACCATAATGATAGTGCAGCA GACATTGAATCTGCTGTCCAAGAGGCTGTTCTTCGTGAACAGGACATTGAGACTCAGCAA GTCATACAAAATCAAAGACAAGCAAAAGCAACAATTGAGCCTACGCAGTATGGAGAAGAC CTCCTTTCAAACCGCCGCAACCCTAATGCATTGAAGGAGCACTTACTAAAAATGACAGCC GAGCATCGTGCAGAGATGGCAAACAAAAGGGGGAAGCCGCTTCATGCAGATAATGGCAAT GTTGAAATTGGCAATGGCTATGGTGTACCAGGAGGGGGTGCTTATTATGCTGCAAACATG TCAAGTGGTCAAATGAATAAACCCAAGGATATAGCTGATAAAGCAAAAGGTGCCGATGAT CTCCCTGAATTTTTGAGGCAGAGATTAAGAGCAAGGGGTATTCTTAAAGATGAGGCGACA AATAATAGATTCACGATTAAACAAAATGTCGATTCTCCAGTAGGGCAGATAAAAGCTGCC CAAGAGTTGCCTCCTGGTTGGGTTGAAGCAAAAGATCCAACAAGTGGTGCTTCTTATTTC TATAATCAGAGCACTGGAACGACCCAATGGGATCGCCCTGGTGCTCCTTTGAACACCATG CAACATCAAGCTCCTCCATCCTCGTCCTTGCCAGAGAATTGGGAGGAGGCACTTGATCAA TCAACAGGCCAGAAATACTATTACAATACAAATACACAAGCAACACAGTGGGAGCCGCCT ACTGCTGTGAACCCAGGTGTTGCGCCTCATGCTCCCACCAATGCTGCTGTTGAGATGGCT GCTCAAAATACAGATATTTGGAACTCTCAAATGCAGAGATGTTTAGGCTGTGGTGGATGG GGTGTAGGTCTTGTCCAGCCATGGGGTTATTGCAATCACTGCACAAGGGTTCAAAATCTT CCTTTTCAACAGTATCCATCCTACCCAAACAATACTACACACTCAAGCAGTAACAAAAAT CCAGGGAATGTAGCAGCCAAGGACAGATCAAGCGCAAAACCTCCATTTGGCAAAGCAAAC AGAAAAGATCACCGCAAAAGAAATCGCCCTGAGGATGATGAGCTTGACCCGATGGACCCA AGCTCTTACTCAGATGCTCCACGGGGTGGCTGGGTTGTTGGCTTGAAGGGTGTGCAGCCA CGGGCAGCAGATACTACTGCAGCTGGACCTTTATTCCAACAAAGACCATATCCGTCACCT GGTGCTGTGCTGAGAAAAAATGCAGAGGTTGCATCTCATGGCAAGAAACGTGGTATGGCT CCGATCACCAAAAGAGGGGATGGCAGTGACGGTCTCGGGGAGGCGGATTAGATCAATCGT CGTAAATTTTCCTTGCAACCCAGTGGACTAGCGGTCATTTTGGCTTTGGCAATGACTGAA ACATCGGTGCACTGTCGTCCAAAAAGAAGCAAACTGTCAGCAGTAAATCACTCCAGTGCA GGAGAACCCAGAGCTGAGTGCATTGTGAGACTGAGCTTAATAAGATTCACATCCTAAATG TGCCCATGGTGTAATTCTCGTGAAATCTGCAGAAGTTTTCGGTGTAAATTTTTGACAGGG TGAAAGAATTCGCAACAGGAATAGTGATGTAGAGCTAATGTGTAATTTTTGGTATTAACC GAAACAGTTCTGTTGAATACTAGAATCTAGGGGTTGTTTTGTGGATAATTCGACCTGTTA ATGCTACCATCTTAATGGAATTTAACGTATTAATGCT