Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0915600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:39894690:39897520:-1 gene:Os01g0915600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 090 description:Similar to TA1 protein (Fragment). (Os01t0915600-01)
Sequence	ATGAACTGCGGGCCGCCCGACCAGTTGCCGCCGGCGACGGCGCCGTCGTGCTTCCTCAAC CTCAACTGGGACCAGTCCATGGACGCGGCGGCGGGAGGGCACCTCGACCCGGCGCTCAGC TCCATGGTGTCCTCGCCGGCGTCCAACTCGACGGGCGCTCTCCACGGGATCTCGCCGCAG CCGCACTACGGTGGCGGGACGCCGCTCAGCTCGCCCCCCAAGCTCAACCTGTCCATGATG GGGCAGTTCCACCACTACGCCGCGCCGCCGCAGGTGGGCGGCGGCGGAGGCGGAGGCGGG GGCCTGCCAATCCTCGAGAACCTGATGCCCATGGGCCACCTCGACCAGTTCCTCGCCGAC CCTGGCTTCGCCGAGCGCGCCGCGAGGCTCTCCGGCTTCGACGCCCGCGGCGGCGGCGGA GGAGGAGGCTACGGCGGCGCCGGCCCGGCGCAATTCGGCCTCCCTGACGCCGGCGCGGCC GGCGCATCGAAGGAGATGGAGCTCGGGAACACCCGGGACGAGTCGTCGGTGTCTGATCCG GCGCCCGGCGGCGCCGAGATTCCGCCCAAGGGGGCTTCCGACGGCAATGCACGGAAGCGG AAGGCCTCCGGGAAGGGCAAAGGCAAGGACAGCCCCATGTCCACCTCCGCCGCCAAGGAG GATTCCAGCGGCAAGCGTTGCAAATCGACGGAGGAGAGCAATGCGGCCGCCGAGGAGAAT TCCGGCAAGGGGAAGGCCGCGCAGAGCAACAGCGAGAATGGCGGCGGCAAGAAGCAAGGG AAGGACAGCTCGTCGAAGCCCCCCGAGCCGCCCAAGGACTACATCCATGTCCGCGCCCGG CGCGGCGAGGCGACGGACAGCCACAGCCTCGCCGAGAGGGTGAGAAGAGAGAAGATAAGC CAGAGGATGAAGCTGCTGCAGGATCTCGTGCCGGGTTGTAACAAGGTGGTTGGAAAGGCT GTCATGCTCGATGAAATCATAAACTATGTGCAGTCGTTGCAACGGCAAGTCGAGTTTTTG TCCATGAAGTTGGCCACTGTGAATCCCCAGCTGGACTTCAACAATTTGCCTAACCTCCTT GCTAAAGATATGCACCAGTCATGCAGCCCGTTACAGAGCTCACATTTTCCACTAGAGACC TCAGGTGCGCCGCTGCCCTACATTAACCAGCCTCAGCAAGGGAACCCTCTCGGTTGTGGC CTGACGAACGGCATGGACAACCAGGGTTCTATGCACCCATTGGACCCGGCATTTTGCCGG CCAATGGGCTCGCACCATCCTTTCCTCAATGGGGTTAGCGATGCGGCTTCTCAGGTTGGT GCTTTCTGGCAAGATGATCTCCAAAGTGTTGTTCAGATGGATATGGGGCAAAGTCAGGAG ATCGCCACCTCTTCCAATAGCTACAATGGATCGTTGCAAACAGTCCACATGAAAATGGAG CTTTGA

Peptide Sequence

PEP ID	Os01t0915600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:39894690:39897520:-1 gene:Os01g0915600 transcript:Os01t0915600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 090 description:Similar to TA1 protein (Fragment). (Os01t0915600-01)
Sequence	MNCGPPDQLPPATAPSCFLNLNWDQSMDAAAGGHLDPALSSMVSSPASNSTGALHGISPQ PHYGGGTPLSSPPKLNLSMMGQFHHYAAPPQVGGGGGGGGGLPILENLMPMGHLDQFLAD PGFAERAARLSGFDARGGGGGGGYGGAGPAQFGLPDAGAAGASKEMELGNTRDESSVSDP APGGAEIPPKGASDGNARKRKASGKGKGKDSPMSTSAAKEDSSGKRCKSTEESNAAAEEN SGKGKAAQSNSENGGGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKIS QRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLL AKDMHQSCSPLQSSHFPLETSGAPLPYINQPQQGNPLGCGLTNGMDNQGSMHPLDPAFCR PMGSHHPFLNGVSDAASQVGAFWQDDLQSVVQMDMGQSQEIATSSNSYNGSLQTVHMKME L

Transcript Sequence

Transcript ID	Os01t0915600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:39894690:39897520:-1 gene:Os01g0915600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 090 description:Similar to TA1 protein (Fragment). (Os01t0915600-01)
Sequence	AATCTCTACTTGCTGCTGCTTCTGCTTGCGATTGCGAGCTCTCTCCTCTCTCTCTGTTTT TTTTTTTTTTGGCTTGCAAAGCTTTTGCTTTGTTTTAGGTGCTTCTTTTCCACTCCTTTA CTGTTCCCCCACTTTTCCTTGCTTTGTCACGCACACGAAAAGCTCCTGCCTTTACCTTAT CTCCGCTCGCCTTCCCTCACCCCCGTCGTAGTGGGATTTGGTGGCTGCTCGCCTCTCGCG TTTCTTTTGCTGGATTGGGGCGTTCTTGGGAGCTCGGGAATTCGGGTGGTTTGGTTGGGT TTCGTGGAGAATTGCGGCAGATCTTTGAGATGAACTGCGGGCCGCCCGACCAGTTGCCGC CGGCGACGGCGCCGTCGTGCTTCCTCAACCTCAACTGGGACCAGTCCATGGACGCGGCGG CGGGAGGGCACCTCGACCCGGCGCTCAGCTCCATGGTGTCCTCGCCGGCGTCCAACTCGA CGGGCGCTCTCCACGGGATCTCGCCGCAGCCGCACTACGGTGGCGGGACGCCGCTCAGCT CGCCCCCCAAGCTCAACCTGTCCATGATGGGGCAGTTCCACCACTACGCCGCGCCGCCGC AGGTGGGCGGCGGCGGAGGCGGAGGCGGGGGCCTGCCAATCCTCGAGAACCTGATGCCCA TGGGCCACCTCGACCAGTTCCTCGCCGACCCTGGCTTCGCCGAGCGCGCCGCGAGGCTCT CCGGCTTCGACGCCCGCGGCGGCGGCGGAGGAGGAGGCTACGGCGGCGCCGGCCCGGCGC AATTCGGCCTCCCTGACGCCGGCGCGGCCGGCGCATCGAAGGAGATGGAGCTCGGGAACA CCCGGGACGAGTCGTCGGTGTCTGATCCGGCGCCCGGCGGCGCCGAGATTCCGCCCAAGG GGGCTTCCGACGGCAATGCACGGAAGCGGAAGGCCTCCGGGAAGGGCAAAGGCAAGGACA GCCCCATGTCCACCTCCGCCGCCAAGGAGGATTCCAGCGGCAAGCGTTGCAAATCGACGG AGGAGAGCAATGCGGCCGCCGAGGAGAATTCCGGCAAGGGGAAGGCCGCGCAGAGCAACA GCGAGAATGGCGGCGGCAAGAAGCAAGGGAAGGACAGCTCGTCGAAGCCCCCCGAGCCGC CCAAGGACTACATCCATGTCCGCGCCCGGCGCGGCGAGGCGACGGACAGCCACAGCCTCG CCGAGAGGGTGAGAAGAGAGAAGATAAGCCAGAGGATGAAGCTGCTGCAGGATCTCGTGC CGGGTTGTAACAAGGTGGTTGGAAAGGCTGTCATGCTCGATGAAATCATAAACTATGTGC AGTCGTTGCAACGGCAAGTCGAGTTTTTGTCCATGAAGTTGGCCACTGTGAATCCCCAGC TGGACTTCAACAATTTGCCTAACCTCCTTGCTAAAGATATGCACCAGTCATGCAGCCCGT TACAGAGCTCACATTTTCCACTAGAGACCTCAGGTGCGCCGCTGCCCTACATTAACCAGC CTCAGCAAGGGAACCCTCTCGGTTGTGGCCTGACGAACGGCATGGACAACCAGGGTTCTA TGCACCCATTGGACCCGGCATTTTGCCGGCCAATGGGCTCGCACCATCCTTTCCTCAATG GGGTTAGCGATGCGGCTTCTCAGGTTGGTGCTTTCTGGCAAGATGATCTCCAAAGTGTTG TTCAGATGGATATGGGGCAAAGTCAGGAGATCGCCACCTCTTCCAATAGCTACAATGGAT CGTTGCAAACAGTCCACATGAAAATGGAGCTTTGACATGACCAAATAAAGGTTCGATCCA AAGCTCTGACGCCCATTGTACATACAGAGAAGTCAGCTTGCCGCGGCAGCACTCTGAGAT TCAACCCTAACAATGTTGGGCCCTAGCAGTGTTTTAGCTTCTAATTTCCCATCTTGGTGT AATGATTCTTTGAACAAAAATGAAACGCACCATGTACGGTAGTCGGGTGTAGTATATATA TGTATGCTACAAGATCGTACATAAGTCGGGTGCAGTATATGATGCTTCATTCAGACCCTT TTACCCTCTCAAGCAGAGAGGGACGACGTGTAATATCATTATTTGTATTCTCATTATATT TGTAGCTGATATATATCTTTAAGATCCTTCTTCCTGTCC