Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0915000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:39866435:39867460:-1 gene:Os01g0915000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF506, plant family protein. (Os01t0915000-01)
Sequence

ATGGCCGTCTACATCCGCCTCGACGACGCCGTCCGCGCGCGGCTCCGCGGGGACGCCGGG
TCGTCGGCGAGCAGCGGCAGCGAGCACGAGGCCTCCGCGTGCCTGTCCGGGCTCGTGCAG
GCGTTTCTTGAGACGGAGGGCGCCGCGGCGGGAGAGGACGGCGCCGGGCCGGCGAGCAAG
GGCGGCGAAGGGTATGACTCCGATGATGGCGACGGTCCGGAACGCGCGGCGGCGGCGGCG
GAGTCCGTGAGGGAGCTGCTCGACCCGCCGGTGGAGGAGGACCCGTTCCGGGTCAGGCTG
GCTGCTGCCGTGGCGGCCGCGATGGAGGCGGAGCCGGCGCTGAGGAGGTACGGGGCGGCG
TTCCGGCGCGCCGTGGCGCGGCGGCTGCGGGCCGCCGGGTACGACGCCGGCGTGTGCAAG
TCGCGGTGGGAGGCTTCCGGTGGCATCACGGCCGGGACGTACGAGTACGTCGACGTGGTC
GCGCCGGCGGCGAGGGGGCAGAAGAGCAGGTACATTGTGGACGCGGACTTCCGGGCGGGG
CTGGAGGTCGCGCGCGCGACGGCGGAGTACGCCGTCGTCGTGGCCGCCGTGCCGGCGTCG
GTGGTGGTGGCGCGGGAGGAGGCCGTCGGGCGCGCCGTGCGCGTCGCGGCCGACGCGGCG
CGGCGGTCGCTCCGTTCGCACGGCCTGCACGTCCCGCCGTGGCGCAAGACCCGGTACATG
CTCGCCAAGTGGCTCGGCCCCTACAAGAGGTCGACGGCCACCTCGCCGTCGGCCGCCGGA
GCAATGCCGATGCCCGCCGCCGCCGCCGGGATGGACGTCAAGTGCCGCGCCGTCGGGTTC
TTCACGCCGCCGCCGGCCGCTCCGGCGGCGAGGATCAAGTAG

Peptide Sequence

PEP ID

Os01t0915000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:39866435:39867460:-1 gene:Os01g0915000 transcript:Os01t0915000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF506, plant family protein. (Os01t0915000-01)
Sequence

MAVYIRLDDAVRARLRGDAGSSASSGSEHEASACLSGLVQAFLETEGAAAGEDGAGPASK
GGEGYDSDDGDGPERAAAAAESVRELLDPPVEEDPFRVRLAAAVAAAMEAEPALRRYGAA
FRRAVARRLRAAGYDAGVCKSRWEASGGITAGTYEYVDVVAPAARGQKSRYIVDADFRAG
LEVARATAEYAVVVAAVPASVVVAREEAVGRAVRVAADAARRSLRSHGLHVPPWRKTRYM
LAKWLGPYKRSTATSPSAAGAMPMPAAAAGMDVKCRAVGFFTPPPAAPAARIK

Transcript Sequence

Transcript ID

Os01t0915000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:39866435:39867460:-1 gene:Os01g0915000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF506, plant family protein. (Os01t0915000-01)
Sequence

CTCACCGCGAGCTCAGACACCTCAAATCCACGCACGCCGCCGGCGAAAATGGCCGTCTAC
ATCCGCCTCGACGACGCCGTCCGCGCGCGGCTCCGCGGGGACGCCGGGTCGTCGGCGAGC
AGCGGCAGCGAGCACGAGGCCTCCGCGTGCCTGTCCGGGCTCGTGCAGGCGTTTCTTGAG
ACGGAGGGCGCCGCGGCGGGAGAGGACGGCGCCGGGCCGGCGAGCAAGGGCGGCGAAGGG
TATGACTCCGATGATGGCGACGGTCCGGAACGCGCGGCGGCGGCGGCGGAGTCCGTGAGG
GAGCTGCTCGACCCGCCGGTGGAGGAGGACCCGTTCCGGGTCAGGCTGGCTGCTGCCGTG
GCGGCCGCGATGGAGGCGGAGCCGGCGCTGAGGAGGTACGGGGCGGCGTTCCGGCGCGCC
GTGGCGCGGCGGCTGCGGGCCGCCGGGTACGACGCCGGCGTGTGCAAGTCGCGGTGGGAG
GCTTCCGGTGGCATCACGGCCGGGACGTACGAGTACGTCGACGTGGTCGCGCCGGCGGCG
AGGGGGCAGAAGAGCAGGTACATTGTGGACGCGGACTTCCGGGCGGGGCTGGAGGTCGCG
CGCGCGACGGCGGAGTACGCCGTCGTCGTGGCCGCCGTGCCGGCGTCGGTGGTGGTGGCG
CGGGAGGAGGCCGTCGGGCGCGCCGTGCGCGTCGCGGCCGACGCGGCGCGGCGGTCGCTC
CGTTCGCACGGCCTGCACGTCCCGCCGTGGCGCAAGACCCGGTACATGCTCGCCAAGTGG
CTCGGCCCCTACAAGAGGTCGACGGCCACCTCGCCGTCGGCCGCCGGAGCAATGCCGATG
CCCGCCGCCGCCGCCGGGATGGACGTCAAGTGCCGCGCCGTCGGGTTCTTCACGCCGCCG
CCGGCCGCTCCGGCGGCGAGGATCAAGTAGACTCGGCGATGAAACATCATAATCAAGGCA
TTAATTAACGGTGTTTGTAGATGTAGAGATTAATTAGAGCGAGAGTTCCTTTCAACTTTG
AGTTGC