Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0914700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:39852601:39856048:1 gene:Os01g0914700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPPL3 description:Peptidase A22B, signal peptide peptidase domain containing protein. (Os01t0914700-01)
Sequence	ATGGCGTTCCCTGCACCCTCCTCCTCCTCCCCTCGCCGCCGCGGCCGCGGCCTCGCCTAC CTCCTCGTCTCCGTCCTCCTGCTCGCGTCCCGCGTGCCGGGCGCCGCCGGCGCGGACTCG GAGTTCGAGGACGGCGTCTCGCCCAAGTTCCCCGGCTGCGACAACCCCTTCCAGAAGGTG AAGGTGACGTACTGGGTGGACGGCGACGAGAGGAGCAGCCTGACCGGGATCACGGCGAGG TTCGGCGAGGTGCTGCCGGCCACCGGCTCCGACGGCGACAAGCGGAAGGCCGTGGTCCCC GCCCCGAAGACCGGCTGCGCCAAGTCATCCGCGCCGCTTGCTAGCTCCATTGCCGTGGCG GAGCGCGGGGAGTGCACGTTCCTGGAGAAGGCCAAGACGGCGGAGTCCGGCGGCGCCGCC GCGCTGCTCCTCATCAACGACGAGGACGATTTGCAGAAGATGGTGTGCACCCAGAACGAC ACGGTCCCTAACATTGGCATCCCGGTCGTGATGGTATCCCAGTCTGCCGGTCGCAAGATC CTCTCCGGCATGGACGGTGGGGCAAAGGTTGACATTCTGATGTATGCGCCGGAGAAGCCG AGTTTCGATGGCGCTATACCTTTCCTCTGGCTGATGGCCGTCGGCAGCGTGGCCTGTGCG TCCGTTTGGTCCTTCGTCGTCGTCGGCGACGAGGATAAGAATGCTCCTACACTGGGTGGA GAAGAAGCTGCTGACTCTGAAATCGTGGAGCTGCAGACCAAAACCGCGCTCGTGTTCATC GTCACCGCGTCGCTTGTCCTGCTGTTCCTGTTCTTCTTCAAATCCACCTGGTCTGCATGG CTGCTGGTTGTGCTGTTCTGCCTCAGTGGTCTCCAGGGATTGCACTATGTTGCCTCGACT CTAATTGTAAGAACTTGTGATCGGTGCCGCGAAGCAAAAGTAGCTCTTCCTGTATTAGGG AACGTGACAGTGGTTACACTTGTCATCCTACCACTAGCTTTGATCTTCGTTGTCGTTTGG GCTGTACACCAGAATTCACCGTTTGCTTGGGTTGGTCAGGATCTTATGGGCATCTGCATG ATGATTCTTGTATTGCAAGTGGTCCATCTGCCAAATATCAAAGTTGCAACAGCGCTTCTT GTGAGCGCTTTCATGTATGACATTTTTTGGGTGTTCATATCACCTTTCATATTCAAGAAA AGTGTCATGATCACAGTTGCTCGTGGTAGCGATGAGGGACCTAGCCTTCCCATGGTTCTG AAGATGCCAAAGGAGTTTGATACATGGAATGGCTATGACATGATCGGATTTGGGGACATT CTTTTCCCAGGACTACTTGTTGCTTTCAGTTTCAGGTATGACAGAGCAAATGGAAAGGAC TTGACTGACGGCTATTTCCTCTGCCTAATGATCGGTTACGCCTTCGGTTTGTCATGCACA TATGTTGGCCTGTACCTAATGAAGAGTGGACAGCCAGCTCTCCTCTACCTAGTCCCATCA ACACTAGGAACTATTGTCACGCTAGGTGCGAAAAGAGGAGAGCTAAGTCAGCTCTGGAAT GCTAAAGTATAG

Peptide Sequence

PEP ID	Os01t0914700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:39852601:39856048:1 gene:Os01g0914700 transcript:Os01t0914700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPPL3 description:Peptidase A22B, signal peptide peptidase domain containing protein. (Os01t0914700-01)
Sequence	MAFPAPSSSSPRRRGRGLAYLLVSVLLLASRVPGAAGADSEFEDGVSPKFPGCDNPFQKV KVTYWVDGDERSSLTGITARFGEVLPATGSDGDKRKAVVPAPKTGCAKSSAPLASSIAVA ERGECTFLEKAKTAESGGAAALLLINDEDDLQKMVCTQNDTVPNIGIPVVMVSQSAGRKI LSGMDGGAKVDILMYAPEKPSFDGAIPFLWLMAVGSVACASVWSFVVVGDEDKNAPTLGG EEAADSEIVELQTKTALVFIVTASLVLLFLFFFKSTWSAWLLVVLFCLSGLQGLHYVAST LIVRTCDRCREAKVALPVLGNVTVVTLVILPLALIFVVVWAVHQNSPFAWVGQDLMGICM MILVLQVVHLPNIKVATALLVSAFMYDIFWVFISPFIFKKSVMITVARGSDEGPSLPMVL KMPKEFDTWNGYDMIGFGDILFPGLLVAFSFRYDRANGKDLTDGYFLCLMIGYAFGLSCT YVGLYLMKSGQPALLYLVPSTLGTIVTLGAKRGELSQLWNAKV

Transcript Sequence

Transcript ID	Os01t0914700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:39852601:39856048:1 gene:Os01g0914700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPPL3 description:Peptidase A22B, signal peptide peptidase domain containing protein. (Os01t0914700-01)
Sequence	GACGCATGCAGCTTCCCTCGTCGGGGAAGACGACGTACGACCCCGACGTACTACGCGCCC ACGCACGCACGACGGGACGGCCGGCCTCCTCACCTCGCTCGCTCGCGCCGCGCCGCTCGC CGGCAAATCCACCACGCCATGGCGTTCCCTGCACCCTCCTCCTCCTCCCCTCGCCGCCGC GGCCGCGGCCTCGCCTACCTCCTCGTCTCCGTCCTCCTGCTCGCGTCCCGCGTGCCGGGC GCCGCCGGCGCGGACTCGGAGTTCGAGGACGGCGTCTCGCCCAAGTTCCCCGGCTGCGAC AACCCCTTCCAGAAGGTGAAGGTGACGTACTGGGTGGACGGCGACGAGAGGAGCAGCCTG ACCGGGATCACGGCGAGGTTCGGCGAGGTGCTGCCGGCCACCGGCTCCGACGGCGACAAG CGGAAGGCCGTGGTCCCCGCCCCGAAGACCGGCTGCGCCAAGTCATCCGCGCCGCTTGCT AGCTCCATTGCCGTGGCGGAGCGCGGGGAGTGCACGTTCCTGGAGAAGGCCAAGACGGCG GAGTCCGGCGGCGCCGCCGCGCTGCTCCTCATCAACGACGAGGACGATTTGCAGAAGATG GTGTGCACCCAGAACGACACGGTCCCTAACATTGGCATCCCGGTCGTGATGGTATCCCAG TCTGCCGGTCGCAAGATCCTCTCCGGCATGGACGGTGGGGCAAAGGTTGACATTCTGATG TATGCGCCGGAGAAGCCGAGTTTCGATGGCGCTATACCTTTCCTCTGGCTGATGGCCGTC GGCAGCGTGGCCTGTGCGTCCGTTTGGTCCTTCGTCGTCGTCGGCGACGAGGATAAGAAT GCTCCTACACTGGGTGGAGAAGAAGCTGCTGACTCTGAAATCGTGGAGCTGCAGACCAAA ACCGCGCTCGTGTTCATCGTCACCGCGTCGCTTGTCCTGCTGTTCCTGTTCTTCTTCAAA TCCACCTGGTCTGCATGGCTGCTGGTTGTGCTGTTCTGCCTCAGTGGTCTCCAGGGATTG CACTATGTTGCCTCGACTCTAATTGTAAGAACTTGTGATCGGTGCCGCGAAGCAAAAGTA GCTCTTCCTGTATTAGGGAACGTGACAGTGGTTACACTTGTCATCCTACCACTAGCTTTG ATCTTCGTTGTCGTTTGGGCTGTACACCAGAATTCACCGTTTGCTTGGGTTGGTCAGGAT CTTATGGGCATCTGCATGATGATTCTTGTATTGCAAGTGGTCCATCTGCCAAATATCAAA GTTGCAACAGCGCTTCTTGTGAGCGCTTTCATGTATGACATTTTTTGGGTGTTCATATCA CCTTTCATATTCAAGAAAAGTGTCATGATCACAGTTGCTCGTGGTAGCGATGAGGGACCT AGCCTTCCCATGGTTCTGAAGATGCCAAAGGAGTTTGATACATGGAATGGCTATGACATG ATCGGATTTGGGGACATTCTTTTCCCAGGACTACTTGTTGCTTTCAGTTTCAGGTATGAC AGAGCAAATGGAAAGGACTTGACTGACGGCTATTTCCTCTGCCTAATGATCGGTTACGCC TTCGGTTTGTCATGCACATATGTTGGCCTGTACCTAATGAAGAGTGGACAGCCAGCTCTC CTCTACCTAGTCCCATCAACACTAGGAACTATTGTCACGCTAGGTGCGAAAAGAGGAGAG CTAAGTCAGCTCTGGAATGCTAAAGTATAGCTTGTGAAATATTGATACTTGCTTGCAGTC TTGCAGCATTGTACTAGTTAGAGAAGCGATCATTGATCTGTATATGAGAATATCTGATGG TTGTTGGTAAATATATCATGCCAACCATCTGCACGAACTTTGGTTAGATTTCTTTTTTCA GTGTACACTTACCATGAATGGTGGTTATTAGTGCGAAGCAGTATGCTCTGGCTGTAAATG TCATGGCTGTGATGTAAATGTGAACAGAATTATATTCTCTGTGTCTTGATGTGTTCTTAG CTGGGTGTAATATAAAAAATCCACTTTGTTTCAGAAACTTCAGATGTTGCTC