Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0914600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:39849645:39851426:-1 gene:Os01g0914600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0914600-01)
Sequence	ATGTCTCGTCGTCGTCCTCCTCACGCCCTCGCCACGCTCCTCTCCCGCCTCCGCGCCTGC AGCTCCGCCTCCCACGCGCTCCAGTGCCACGCCCTCCTCCTCACCTCCGGCCACCTCGCC GCCTCCCCGGCCCGCCTCTCCAACCTCCTCCTCCTCGCCCTCGCCTCCGCCTCCGCCTCC CCCTCCGCCGCCGACCACGCCGACTCCGTCTTCGCCCACCTCGCGGAGGAAGCCTCCCGC CACGCGTTCCCCTGGAACACCCTCGTCCGCCTCCACGCCGCCGCGAGCCCGCGGAGATCC CTCCTCTACTTCTCGCGCATGCGGCGAGCCGCCGTGGCGCCCGACGCCTACACGTTCCCG GCCGTGCTCAAGGCGTGCGGCTGCGCGCCCGGGTGTAGGGTGGGGTTGGTGGTGCACGGC GAGGCGGTGAGGACGGGGTTGGACGCCGACCTGTTCACGAGGAACGCGCTGATTAGCTTC TACTGCAGGATCGGGGACTGCCGTTCCGGGAGGAAGGTGTTCGATCACGGCGTGCGGGAC CTCGTCTCCTGGAACTCTATGGTGGCGGGGTACGTTGGGTGTGGGGAGGTGGATCTGGCG CAGGATTTGTTCGACGAAATGCGGCAGAGGGATGCGTTCTCCTGGGCCACCATGATCGAT GGGTACGGAGAGATGGCAGGTGGTGTAGATCGTGCACGTGAGTTGTTTGATCAAATGCCT GACAGGGATTTGGTGTGCTGGAACTCCATGATTGATGGTTATGCCAGGCATGGGAGAATG GATGAAGCGAGGGTTCTGTTCGAGGAGATGCCTGAGAGGAATGTGATCTCATGGAGTATT GTCATCGATGGCTATGTCAGATTCGGGGAGCCAAATGAAGCTTTGGAGTTTTTCCAGAGG ATGCTAAGATGTGGTATCAAGCCTGATAGAGTAGCTGCAGTTGGGGCTGTTGCAGCTTGT GCACAGCTGGGAGCTCTGGAGCAAGGCAGGTGGCTGCACTCATACTTGGAGAAGAAGAAG GTGTTGTTCGATGTTGTGGTGCAAACAGCTTTGATAGATATGTACGTGAAATGCGGTCGT TTGGATCTTGCCAAATTGATCTTTGAAAGCATGCCCAAGAAGAGTGTGGTCACTTGGAAT GTGATGATTGTTGGACTTGGAACTCATGGTTATGGACTTGATGCCATCAAGCTTTTTAAC CAAATGGAAACTGAAAGGGCACCAATGGATGATCTTAGCATACTTGCTGTGTTGACTTCT TGCACGCATGCTGGGTTAGTCTCAGAGGGTTTGGGGATATTTTACAGAATGGAGAAGGAT TTAGGACTAGAACCTAAGGTGGAACATTATGGTGCATTGATTGATCTCCTTGGCCGTGCT GGACGAGTGGATCAGGCTAGAAACACAATAGAGACAATGCCGATGGAACCGACTCCTGAA TTATGGGGATCTCTTCTTGCTTCCTGCCGAAGCCATAGGTGTGTGGAGCTGGCTGAGCTA TCAGTTGAGCGTCTGGCCAGTCTCGGAGCAGATGACTCTGGAGTCTATGTTCTTCTGTCC AATATCTATGCTGATGAAGGAATGTGGGATGATGTTTTCAGGATTAGGAAGTTGATGAGT GCTGAGGGTATGAAAAAGAACATTGGACGGAGTGTGATTGAGGTGGATGGACAAATTCAT GAGTTTGTGAATGGAGGTAGTTCACATCCCCACAAGGAGGAAATTTACTTGACGCTGTGG AATTTATCTAACATAGCAGCATCTATTTGA

Peptide Sequence

PEP ID	Os01t0914600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:39849645:39851426:-1 gene:Os01g0914600 transcript:Os01t0914600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0914600-01)
Sequence	MSRRRPPHALATLLSRLRACSSASHALQCHALLLTSGHLAASPARLSNLLLLALASASAS PSAADHADSVFAHLAEEASRHAFPWNTLVRLHAAASPRRSLLYFSRMRRAAVAPDAYTFP AVLKACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDHGVRD LVSWNSMVAGYVGCGEVDLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMP DRDLVCWNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQR MLRCGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGR LDLAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTS CTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPE LWGSLLASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMS AEGMKKNIGRSVIEVDGQIHEFVNGGSSHPHKEEIYLTLWNLSNIAASI

Transcript Sequence

Transcript ID	Os01t0914600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:39849645:39851426:-1 gene:Os01g0914600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0914600-01)
Sequence	AAACTTTGCCATGTCTCGTCGTCGTCCTCCTCACGCCCTCGCCACGCTCCTCTCCCGCCT CCGCGCCTGCAGCTCCGCCTCCCACGCGCTCCAGTGCCACGCCCTCCTCCTCACCTCCGG CCACCTCGCCGCCTCCCCGGCCCGCCTCTCCAACCTCCTCCTCCTCGCCCTCGCCTCCGC CTCCGCCTCCCCCTCCGCCGCCGACCACGCCGACTCCGTCTTCGCCCACCTCGCGGAGGA AGCCTCCCGCCACGCGTTCCCCTGGAACACCCTCGTCCGCCTCCACGCCGCCGCGAGCCC GCGGAGATCCCTCCTCTACTTCTCGCGCATGCGGCGAGCCGCCGTGGCGCCCGACGCCTA CACGTTCCCGGCCGTGCTCAAGGCGTGCGGCTGCGCGCCCGGGTGTAGGGTGGGGTTGGT GGTGCACGGCGAGGCGGTGAGGACGGGGTTGGACGCCGACCTGTTCACGAGGAACGCGCT GATTAGCTTCTACTGCAGGATCGGGGACTGCCGTTCCGGGAGGAAGGTGTTCGATCACGG CGTGCGGGACCTCGTCTCCTGGAACTCTATGGTGGCGGGGTACGTTGGGTGTGGGGAGGT GGATCTGGCGCAGGATTTGTTCGACGAAATGCGGCAGAGGGATGCGTTCTCCTGGGCCAC CATGATCGATGGGTACGGAGAGATGGCAGGTGGTGTAGATCGTGCACGTGAGTTGTTTGA TCAAATGCCTGACAGGGATTTGGTGTGCTGGAACTCCATGATTGATGGTTATGCCAGGCA TGGGAGAATGGATGAAGCGAGGGTTCTGTTCGAGGAGATGCCTGAGAGGAATGTGATCTC ATGGAGTATTGTCATCGATGGCTATGTCAGATTCGGGGAGCCAAATGAAGCTTTGGAGTT TTTCCAGAGGATGCTAAGATGTGGTATCAAGCCTGATAGAGTAGCTGCAGTTGGGGCTGT TGCAGCTTGTGCACAGCTGGGAGCTCTGGAGCAAGGCAGGTGGCTGCACTCATACTTGGA GAAGAAGAAGGTGTTGTTCGATGTTGTGGTGCAAACAGCTTTGATAGATATGTACGTGAA ATGCGGTCGTTTGGATCTTGCCAAATTGATCTTTGAAAGCATGCCCAAGAAGAGTGTGGT CACTTGGAATGTGATGATTGTTGGACTTGGAACTCATGGTTATGGACTTGATGCCATCAA GCTTTTTAACCAAATGGAAACTGAAAGGGCACCAATGGATGATCTTAGCATACTTGCTGT GTTGACTTCTTGCACGCATGCTGGGTTAGTCTCAGAGGGTTTGGGGATATTTTACAGAAT GGAGAAGGATTTAGGACTAGAACCTAAGGTGGAACATTATGGTGCATTGATTGATCTCCT TGGCCGTGCTGGACGAGTGGATCAGGCTAGAAACACAATAGAGACAATGCCGATGGAACC GACTCCTGAATTATGGGGATCTCTTCTTGCTTCCTGCCGAAGCCATAGGTGTGTGGAGCT GGCTGAGCTATCAGTTGAGCGTCTGGCCAGTCTCGGAGCAGATGACTCTGGAGTCTATGT TCTTCTGTCCAATATCTATGCTGATGAAGGAATGTGGGATGATGTTTTCAGGATTAGGAA GTTGATGAGTGCTGAGGGTATGAAAAAGAACATTGGACGGAGTGTGATTGAGGTGGATGG ACAAATTCATGAGTTTGTGAATGGAGGTAGTTCACATCCCCACAAGGAGGAAATTTACTT GACGCTGTGGAATTTATCTAACATAGCAGCATCTATTTGATC