Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0912900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:39794226:39799341:-1 gene:Os01g0912900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0912900-01)
Sequence	ATGGCGTCCCAGCACGGCGGCGACCCGCGCCTCGACCGCCTCTCGCGTGCCCTCGCCTCC GACCACCCGCCGCCGGCGGCCGCCGCGGTCCACGCGCATCTCGTCCGCGCGCACGCCGGC ACGCCGCCCCCCGTCATCCGGTCCCTCCTCAACCGCGCCATTCGCCGCCTCTCCAAGCCG CACCCGCGCGCCGCGCTCCGCCTGCTCCTCCTCATGCCGCGCCTCCCCGTCTCCCCCGAC CACTTCTCCCTCCCCTTCGCGCTCAACGCCGCCGCGTCGCTCCGGTTGCTCCCGCTCGGC GCCTCCCTGCACGCGCTCGCCCTCCGCCTCGCGCTCCTCCCCTGCCGCCTCCCCGTCGCC AACGCGCTCGTTGATCTCTACGCCAAGTGCGACGATCTCCCCGCCGCACACACCGCGCTC GCCGACATCGCGGCCCCCGACGCCGTCTCGTTCAACTCGCTCCTCTGCGCGCACGCCCGC CTCGCCTCCGTGCCCGACGCCGAGTCCCTCTTTGTTGCCATGCCATCCAGAACCCAGGTA TCGTGGAACGCCATGGTGGTCGTCTACGTCAATGCAGGGGACGTCTCTTCTGCTCGCCGC GTGTTCGATCAAATGCCTACCAGGGACTCCACCTCGTGGTCGGTGCTGATTGTTGGGTAC TGCAAGTGTGGTTCAATGCGGAGTGCACGAGAGGTGTTCGATAGAATGCCGGCAAAGAAT CTTGTGGCATGGACAGCGATGATCAATGGGTATGCGCAGAGTGGGGTGCCAAAGGAATCA CTTGCGCTGTTTAGAGAAATGGAGGCTGCTGGGATTGAGCCTGATGCAGCAACTATGGTC GGCGTTATATCTGCTGCCTCGCAGATTGGCAGCACGGAGTTGGCTGGGTGGGTTGGAAGT TATGTTGACAAGAAGAGGATTGAAAGGAACGATAAAGTTCTTACAGCACTTGTAGATATG CATGCTAAGTGTGGGAATGTTGACGAGGCTCTCAGTGCTTTTAGGGAGATTGCACAGCCA GATGCATACCCTTATACTGCACTTATTAGTGGGCTGGCAGCTCATGGTCATGCAAAATTA GCGCTTCAAGTGTTTGAAAGGATGCAAGCTCAGTCAGTTTGGCCTGATCCAATCACTTTC GTCGGTGTGCTTACCGCATGCAGCCATGCAGGACTTGTCGATAAAGGTTTGGATTACTGG GAGGCAATGGTGAAGTACTATGGGATGGAGCGTCGAGCTGATCACTATGCTTGTGTAGTT GACATGCTTGGCCGAGCGGGGAGGCTTGAGGAGGCTTTTGAAATGGTGCAAACGATGCCA ATGGGCCCCCACCCAGGGGCTCTTGGTGCATTGCTTAGTGCCTGCAAGACGCATGGCAAT GTTGAGATTGCTGAAATTGTTGCAAACAAACTTTTTGAGTTGGAACCTCACAACACTGGG AACTATATAATGTTGTCAAATATATATGCTGAGAAAGAACAATGGGAGGAGGCAGAAAGA ATTAGATCAGTTATGAGAACAAGACTGCCCTTCAAACAGCCAGGCTCTAGTTGGGTGGAG GATCGACAGAGGGAGCGTGGCAGGTTTCCTTTGAGGAGCTGA

Peptide Sequence

PEP ID	Os01t0912900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:39794226:39799341:-1 gene:Os01g0912900 transcript:Os01t0912900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0912900-01)
Sequence	MASQHGGDPRLDRLSRALASDHPPPAAAAVHAHLVRAHAGTPPPVIRSLLNRAIRRLSKP HPRAALRLLLLMPRLPVSPDHFSLPFALNAAASLRLLPLGASLHALALRLALLPCRLPVA NALVDLYAKCDDLPAAHTALADIAAPDAVSFNSLLCAHARLASVPDAESLFVAMPSRTQV SWNAMVVVYVNAGDVSSARRVFDQMPTRDSTSWSVLIVGYCKCGSMRSAREVFDRMPAKN LVAWTAMINGYAQSGVPKESLALFREMEAAGIEPDAATMVGVISAASQIGSTELAGWVGS YVDKKRIERNDKVLTALVDMHAKCGNVDEALSAFREIAQPDAYPYTALISGLAAHGHAKL ALQVFERMQAQSVWPDPITFVGVLTACSHAGLVDKGLDYWEAMVKYYGMERRADHYACVV DMLGRAGRLEEAFEMVQTMPMGPHPGALGALLSACKTHGNVEIAEIVANKLFELEPHNTG NYIMLSNIYAEKEQWEEAERIRSVMRTRLPFKQPGSSWVEDRQRERGRFPLRS

Transcript Sequence

Transcript ID	Os01t0912900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:39794226:39799341:-1 gene:Os01g0912900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0912900-01)
Sequence	TGGAACGTGCTGTTTGCGTGTCTTCGCATTCATGCATTTCTATCCGTCGTTAGACAACCA ATCGCCAGGTCAATTGTAGTGCCGGATGGCTAGCTGGTTGGATGACACTGATCATAGCTT GAACTTTACGTATTTATTTTTGGAGCAGATGTTCGTATGGTAAAATGCCTTAATGGTATA CGATCTATTTGACATCAGATACAACTTTCTGATATTGATTCCAATTCCATTCAGGGAAAG AGCCAGAGTGCCGTACAATTTGCACACAGAGGTGTGTCCAAAAGAACTTTTTTGCAGTAA AAATGTGAAATATAGGGAGACATGAACCATTAGGCATTTGTCACCCGTGTGCCTGTGTGT GTCACTCTTCTCATGATCTCATCACACCAGTAAACTGCATATTAACGCCTGAATTCATTG GTAGTGCCAAATTCTAGGTAAACTCCGGCACTATCAAAATATTGTAGGGTAAAGTTATTT AGCTAATATTTGGATTGCTACCAATATAAAACCAAACTCTTATAGTATAGAGGAGAAACT TCTAGAATATGACCAAATAAGGTAGGCACTACCAAATATTTGGTGTTAGTCCAAACTAAC ACACATATTATTCAGTTTGCCAACAAAGTGGAAAGGCATGTTTTGGTATCAAACCAAAAC GGCCCTAATTAAAAACAAGGAGGGACAGGTAAATTAATTGGGCCGTCAAACTCAGGAAAA GCCCAGTCTGGTTCAAAAGGCCCAAGATACAAAAAAAAACCGCAACCCCAACTACACGTC TCCGGCACAGTGGAAGTCTACTTTGCCTCCCTTATTTCTTGCTCCTGACTCAATCGCCTC CACCGACCACAGCTGGGCCACCTCCCATGGCGTCCCAGCACGGCGGCGACCCGCGCCTCG ACCGCCTCTCGCGTGCCCTCGCCTCCGACCACCCGCCGCCGGCGGCCGCCGCGGTCCACG CGCATCTCGTCCGCGCGCACGCCGGCACGCCGCCCCCCGTCATCCGGTCCCTCCTCAACC GCGCCATTCGCCGCCTCTCCAAGCCGCACCCGCGCGCCGCGCTCCGCCTGCTCCTCCTCA TGCCGCGCCTCCCCGTCTCCCCCGACCACTTCTCCCTCCCCTTCGCGCTCAACGCCGCCG CGTCGCTCCGGTTGCTCCCGCTCGGCGCCTCCCTGCACGCGCTCGCCCTCCGCCTCGCGC TCCTCCCCTGCCGCCTCCCCGTCGCCAACGCGCTCGTTGATCTCTACGCCAAGTGCGACG ATCTCCCCGCCGCACACACCGCGCTCGCCGACATCGCGGCCCCCGACGCCGTCTCGTTCA ACTCGCTCCTCTGCGCGCACGCCCGCCTCGCCTCCGTGCCCGACGCCGAGTCCCTCTTTG TTGCCATGCCATCCAGAACCCAGGTATCGTGGAACGCCATGGTGGTCGTCTACGTCAATG CAGGGGACGTCTCTTCTGCTCGCCGCGTGTTCGATCAAATGCCTACCAGGGACTCCACCT CGTGGTCGGTGCTGATTGTTGGGTACTGCAAGTGTGGTTCAATGCGGAGTGCACGAGAGG TGTTCGATAGAATGCCGGCAAAGAATCTTGTGGCATGGACAGCGATGATCAATGGGTATG CGCAGAGTGGGGTGCCAAAGGAATCACTTGCGCTGTTTAGAGAAATGGAGGCTGCTGGGA TTGAGCCTGATGCAGCAACTATGGTCGGCGTTATATCTGCTGCCTCGCAGATTGGCAGCA CGGAGTTGGCTGGGTGGGTTGGAAGTTATGTTGACAAGAAGAGGATTGAAAGGAACGATA AAGTTCTTACAGCACTTGTAGATATGCATGCTAAGTGTGGGAATGTTGACGAGGCTCTCA GTGCTTTTAGGGAGATTGCACAGCCAGATGCATACCCTTATACTGCACTTATTAGTGGGC TGGCAGCTCATGGTCATGCAAAATTAGCGCTTCAAGTGTTTGAAAGGATGCAAGCTCAGT CAGTTTGGCCTGATCCAATCACTTTCGTCGGTGTGCTTACCGCATGCAGCCATGCAGGAC TTGTCGATAAAGGTTTGGATTACTGGGAGGCAATGGTGAAGTACTATGGGATGGAGCGTC GAGCTGATCACTATGCTTGTGTAGTTGACATGCTTGGCCGAGCGGGGAGGCTTGAGGAGG CTTTTGAAATGGTGCAAACGATGCCAATGGGCCCCCACCCAGGGGCTCTTGGTGCATTGC TTAGTGCCTGCAAGACGCATGGCAATGTTGAGATTGCTGAAATTGTTGCAAACAAACTTT TTGAGTTGGAACCTCACAACACTGGGAACTATATAATGTTGTCAAATATATATGCTGAGA AAGAACAATGGGAGGAGGCAGAAAGAATTAGATCAGTTATGAGAACAAGACTGCCCTTCA AACAGCCAGGCTCTAGTTGGGTGGAGGATCGACAGAGGGAGCGTGGCAGGTTTCCTTTGA GGAGCTGAAAACCCGAACACATATCTCTCTTTGTTTCAAATGTAAATTTTCAGATGATGC CAAACAGATCTTATTGAACTGCCAGAAATGCAGGAGCTACTGATGCCATTAAGCCTGATT TCACTCTTGACAGCGGGAGCATAGTAGTCTGACTACAAGGAATTGATAGACAATTCTCGT TGCTGCAAGATTGTTAACTTTTCTGAGATGCTGCAAGCTAAGCTGGTTTTAAACAAGCTA ATTATCAGGGGCGGATGATCTATGGATCAGTTTGTCGTTAAGGGCATTCCTCAGCTTGAC TTCACCGTCTCGATCGCTTGGATTAATTCATCTAGTTTGGCACCTGTGACCTCCTTGACG ACCTTCCCGTCCTTGAGAATCTTGAATGTTGGCACAACCTTTATGCCCAGCTCCTTTGCA AGAGACTGCGAATCGCACGCACCAAGGAGGCTTAGCACGATTTATTCAGGAAAACAGCAG ATACATTCCAATCGAATAATGGTGGGTGGAGCGTAGACAAGAGAAAGAAAATCAGTTCTA ACTGACCTTGTTGTCTTGATTGCAGTCGAGTTTGAGGAACACAACGTCCTGGTCCTTCTC GGACATCTCCTGGAATTTCGGTGCCATCACCTTGCAAGGGCCGCACCTGCAAATCAACCA GTCAGTTTTACAGTTATTACACTGAGCAGTGGGATGAGATCTGTTCCCTTTCTTATTCAC GCCGCTCATTTCAAAATAAATCCAGCTCGTGATAAGACTGAAGAATTCATGCGAGGCAAC AGTTCATCAATGGAGATTGACGCGAAGAGATCAGTGGAGTTTTGTGGCTTTTGTGAAGTA CCATTGGGTGTACATGTCGAGGACGACGACCTTGGGCCCTGCCGACTTGACAATTGGCCA GAAGGTATCCTTGTTCACCTCCGTCACCTGCCCGGTCACGGCCACCGCCTCCGCCTCGGC CCCAACAGTGGCGGTGTCCGAGCCGCTCGACCTCACGGGGATCACCGCCCTTGTCTCAGG GCCAGACACCACCGTCAGGCTCCTCCTCTGAGAAGCCACACCGCCGCCGAGCAAGGCGGG GAAGCGCCCGCAGGCGGCGGGGCGGCATGTGGAGATGGCCGGCGAGGAAGCCGGCCCGTG CGAGGAGGAGACGGAGAGGCGTAGCGCCATTGGATGGGAGAATTTTGGAAGGTAATGGCC TAATTGGGTGGCGAGTTGGTGCTAGGAAGGAAGGATGTGCGTTTTTCTTCAGCAGCGGCA GCGGCAGATGAGTGGTGAGCTTGAAAGGATATCTTGCATTGCTTGGCGGTATTCATAGCC TTTCTAGTGGAGATAGTTTCTTGGCGGGGAAATGACATGGCTGCCCCAGGTAATTCCTGC ACTTTTGTGGTGGCACTCCACCTATAGCTTTCTGTGGGATGGGGCATTTCCGGTATCTGA AAGATCGGGTTGTGTGGTGCCTGCGCATCTCTGAGGTTTCATGGAGGAGAGAGCTTGTCT AACATTTGTAGATGGCTCTTTGTGTCTGGAACTGATGGCCTCACGATTGACGGTAACATG GAATCAGTATCATAGATGTC