Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0912700-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:39777762:39779892:1 gene:Os01g0912700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T23K8.14 protein. (Os01t0912700-01)
Sequence

ATGGCCACCGCCACCGCCACCGCCGCCGCTCTCTTCTCCTCCCGCACCCTTTCCCCCTCC
TCCTCCCCCCGGCGACGGCGACGGCGAGGCATCCCCGCCGCCGTCACCGGCTTCCTCTCC
CGCCGCCATGCTCCCGCGCTCCAACGCCGCCTCGCCCCCCTGCACGTTGTGGATGATTCC
AAGGAGGTAGAGACGGCTGCCGGAGATGGTGCGGAGGAGAGGTCGCAGACGGACAAGCTG
GTGGACGGGATGGACTTCGGGGAGCTCTGCAACGACTTCGAGTGCATAAGCAGCCCCTAC
GTGGAGGCCACCGCGAGGCAGCTCGCCCGCGACATCCTCGACCTCCGCGACGACAACCGC
GCCTTCACCTGCTACGCCGTCTCCGTCAAATACAAGGACCCGGTCAGAACATTTGTTGGA
CGGGAGAAGTACAAGAGGCCATTGTGGATCACCAAGGCACTCGAAAACCCTACAGTGACA
GTCCAGGAAATGTCAATGCAATCGACAAGCAACCTGACCATCAAATGGACATTCAGAGGC
AAACCTAAGAATCCAATCTTCGCAACCATCGGAGGAGACCTGATCGTCTCTGTTACCTCA
CAGTTCGTATTGAACCAGATTAGCGGCCAAGTGCTCGAACAGGTCGACTCATGGGACCTC
TCTGCCTCGTCTCCTCCTGCCCAGGCCTACTTTTGGTTGTCCAGGAGGGCCTTCTCCACT
GTTGAAGCCGGAAAGGACACAATCGAAGCTGCAAAGGGTACAGCATCTCGGCTATCATCA
AAGAAAGATGAGAACTTGGAGGTTTATCCAGATCCCTCAGGGGATCCTACTAAGTTCTTC
CAAAGGCCGGATGATGGATTGAACCAAGATGTGTACCAGATTGCGCTTTTCCTGGCCGTT
CTCTACTTCATTGTACAGTTTTTGAGAACGACTCTGTGA

Peptide Sequence

PEP ID

Os01t0912700-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:39777762:39779892:1 gene:Os01g0912700 transcript:Os01t0912700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T23K8.14 protein. (Os01t0912700-01)
Sequence

MATATATAAALFSSRTLSPSSSPRRRRRRGIPAAVTGFLSRRHAPALQRRLAPLHVVDDS
KEVETAAGDGAEERSQTDKLVDGMDFGELCNDFECISSPYVEATARQLARDILDLRDDNR
AFTCYAVSVKYKDPVRTFVGREKYKRPLWITKALENPTVTVQEMSMQSTSNLTIKWTFRG
KPKNPIFATIGGDLIVSVTSQFVLNQISGQVLEQVDSWDLSASSPPAQAYFWLSRRAFST
VEAGKDTIEAAKGTASRLSSKKDENLEVYPDPSGDPTKFFQRPDDGLNQDVYQIALFLAV
LYFIVQFLRTTL

Transcript Sequence

Transcript ID

Os01t0912700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:39777762:39779892:1 gene:Os01g0912700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T23K8.14 protein. (Os01t0912700-01)
Sequence

ACCAATGGCCACCGCCACCGCCACCGCCGCCGCTCTCTTCTCCTCCCGCACCCTTTCCCC
CTCCTCCTCCCCCCGGCGACGGCGACGGCGAGGCATCCCCGCCGCCGTCACCGGCTTCCT
CTCCCGCCGCCATGCTCCCGCGCTCCAACGCCGCCTCGCCCCCCTGCACGTTGTGGATGA
TTCCAAGGAGGTAGAGACGGCTGCCGGAGATGGTGCGGAGGAGAGGTCGCAGACGGACAA
GCTGGTGGACGGGATGGACTTCGGGGAGCTCTGCAACGACTTCGAGTGCATAAGCAGCCC
CTACGTGGAGGCCACCGCGAGGCAGCTCGCCCGCGACATCCTCGACCTCCGCGACGACAA
CCGCGCCTTCACCTGCTACGCCGTCTCCGTCAAATACAAGGACCCGGTCAGAACATTTGT
TGGACGGGAGAAGTACAAGAGGCCATTGTGGATCACCAAGGCACTCGAAAACCCTACAGT
GACAGTCCAGGAAATGTCAATGCAATCGACAAGCAACCTGACCATCAAATGGACATTCAG
AGGCAAACCTAAGAATCCAATCTTCGCAACCATCGGAGGAGACCTGATCGTCTCTGTTAC
CTCACAGTTCGTATTGAACCAGATTAGCGGCCAAGTGCTCGAACAGGTCGACTCATGGGA
CCTCTCTGCCTCGTCTCCTCCTGCCCAGGCCTACTTTTGGTTGTCCAGGAGGGCCTTCTC
CACTGTTGAAGCCGGAAAGGACACAATCGAAGCTGCAAAGGGTACAGCATCTCGGCTATC
ATCAAAGAAAGATGAGAACTTGGAGGTTTATCCAGATCCCTCAGGGGATCCTACTAAGTT
CTTCCAAAGGCCGGATGATGGATTGAACCAAGATGTGTACCAGATTGCGCTTTTCCTGGC
CGTTCTCTACTTCATTGTACAGTTTTTGAGAACGACTCTGTGATTGTACTAGCTCCCACA
GTCCCAACTCAACCTGATACTCTGGCCTGATTCTCCAGGTCAAGCTTTTGTGTATCAGTG
TATGCATATATGTGTGTGTATCTATTTC