Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0911900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:39737140:39741758:-1 gene:Os01g0911900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Uncharacterized ACR, COG1565 family protein. (Os01t0911900-01)
Sequence

ATGGCGCCGCCGCACATGGCGTCCGTCCCGGCGGCGCTCCGGCGAGCGGCGACGCTGGCG
CGGTGGTATCCGGCGGCGATGTTCTCGTCGGGGATCGTCCCCGAGAACAAGCCCATCCTG
GTGCGTGACTTCGTGAGGTCGGCGCTGTACGACCCCAACCATGGCTACTTCTCCAAGCGG
TCGGGACCCGTGGGCGTGCTCGACTCCAGCATCCGCTTCAACCAGCTCGACGGTAGGAGT
GCGTATATGCAGTACCTTGATAAGTTGTACAAGAAGCATGACATCGCTTGGTTCACTCCA
GTGGAGCTCTTCAAGCCATGGTATGCCTATGCAATAGCTGCATCAATCCTCCGTACAGCA
AATCTTTCAGTCCCACTGAAGATTTACGAAATTGGTGGTGGTTCTGGCACATGTGCAAAA
TGCATACTTGACTACATGATGTTAAATGCTCCACCGAAAGTATACAATACTATGAAATAC
ATCTCAGTAGAAATTAGTTCCTCTCTAGCTGAGAAGCAATTGGAAACTGTTGGTGAGGTG
CGAAGCCATTTGTCAAAGTTCATGGTTGAGTGTCGTGACGCAACTGACAGAGCTGGATGG
GGCCGCAAGGATCCTCAACCTTGTTGGGTGTTAATGCTTGAGGTACTTGACAATCTACCA
CATGACCTTGTCTATTCGCCAGATCAGGTCTCTCCATGGATGGAAGTATGGATTGAAAAA
GTAAATGGCAGTTCACAAGGCTCTGAGGTATACAAACCATTACAAGACCCACTAGTTTCC
CGCTGTGTCGAGATTACTGGCATAAATGAAGAGAAAGTGTCTGTGAGAGACAAATTATCA
CTTGCTGCAAAAGGAGTTGTGTCAAAAGTATTCCCAAAGCCTCGGAGAGCTTGGTTACCA
ACTGGATGCTTGAAAATACTAGATACTTTACATCAAGCTTTGCCAAGCATGTCCCTTATA
GCTTCAGATTTCAGCTATCTTCCTGATGTCAGTATACCTGGCGATAGAGCTCCATTGGTT
TCTTCAAAGAAGGACGGGAGGACTTTGGATCATCGCAACTATCTTGAGGCTCAGGGTGAC
GCAGATATTTTCTTCCCAACCGATTTCTGGCTTTTGGAGAAGATCGACCATGACTGCTCT
GGTTTCTCAAAACAGCAAAAGAACCCCGGTGCATTTAAACCAGTTAAGACGAGGAGAACC
ATCATTCTTGATTCTGCTGCCTTCATGGAAGAGTTTGGACTGCCGTTGAAGACTAGGACC
AAAGATGGATATAATCCACTCCTTGATGATTTCAGGAACACCAAGTTCTATCTAAGCGTT
CCTACCCATAACAAGAAATAG

Peptide Sequence

PEP ID

Os01t0911900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:39737140:39741758:-1 gene:Os01g0911900 transcript:Os01t0911900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Uncharacterized ACR, COG1565 family protein. (Os01t0911900-01)
Sequence

MAPPHMASVPAALRRAATLARWYPAAMFSSGIVPENKPILVRDFVRSALYDPNHGYFSKR
SGPVGVLDSSIRFNQLDGRSAYMQYLDKLYKKHDIAWFTPVELFKPWYAYAIAASILRTA
NLSVPLKIYEIGGGSGTCAKCILDYMMLNAPPKVYNTMKYISVEISSSLAEKQLETVGEV
RSHLSKFMVECRDATDRAGWGRKDPQPCWVLMLEVLDNLPHDLVYSPDQVSPWMEVWIEK
VNGSSQGSEVYKPLQDPLVSRCVEITGINEEKVSVRDKLSLAAKGVVSKVFPKPRRAWLP
TGCLKILDTLHQALPSMSLIASDFSYLPDVSIPGDRAPLVSSKKDGRTLDHRNYLEAQGD
ADIFFPTDFWLLEKIDHDCSGFSKQQKNPGAFKPVKTRRTIILDSAAFMEEFGLPLKTRT
KDGYNPLLDDFRNTKFYLSVPTHNKK

Transcript Sequence

Transcript ID

Os01t0911900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:39737140:39741758:-1 gene:Os01g0911900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Uncharacterized ACR, COG1565 family protein. (Os01t0911900-01)
Sequence

GCGTGGGCATTGCCGCCGCCGCCGCCGCAGCGACTCACTCCCCGACTCCCCCATGGCGCC
GCCGCACATGGCGTCCGTCCCGGCGGCGCTCCGGCGAGCGGCGACGCTGGCGCGGTGGTA
TCCGGCGGCGATGTTCTCGTCGGGGATCGTCCCCGAGAACAAGCCCATCCTGGTGCGTGA
CTTCGTGAGGTCGGCGCTGTACGACCCCAACCATGGCTACTTCTCCAAGCGGTCGGGACC
CGTGGGCGTGCTCGACTCCAGCATCCGCTTCAACCAGCTCGACGGTAGGAGTGCGTATAT
GCAGTACCTTGATAAGTTGTACAAGAAGCATGACATCGCTTGGTTCACTCCAGTGGAGCT
CTTCAAGCCATGGTATGCCTATGCAATAGCTGCATCAATCCTCCGTACAGCAAATCTTTC
AGTCCCACTGAAGATTTACGAAATTGGTGGTGGTTCTGGCACATGTGCAAAATGCATACT
TGACTACATGATGTTAAATGCTCCACCGAAAGTATACAATACTATGAAATACATCTCAGT
AGAAATTAGTTCCTCTCTAGCTGAGAAGCAATTGGAAACTGTTGGTGAGGTGCGAAGCCA
TTTGTCAAAGTTCATGGTTGAGTGTCGTGACGCAACTGACAGAGCTGGATGGGGCCGCAA
GGATCCTCAACCTTGTTGGGTGTTAATGCTTGAGGTACTTGACAATCTACCACATGACCT
TGTCTATTCGCCAGATCAGGTCTCTCCATGGATGGAAGTATGGATTGAAAAAGTAAATGG
CAGTTCACAAGGCTCTGAGGTATACAAACCATTACAAGACCCACTAGTTTCCCGCTGTGT
CGAGATTACTGGCATAAATGAAGAGAAAGTGTCTGTGAGAGACAAATTATCACTTGCTGC
AAAAGGAGTTGTGTCAAAAGTATTCCCAAAGCCTCGGAGAGCTTGGTTACCAACTGGATG
CTTGAAAATACTAGATACTTTACATCAAGCTTTGCCAAGCATGTCCCTTATAGCTTCAGA
TTTCAGCTATCTTCCTGATGTCAGTATACCTGGCGATAGAGCTCCATTGGTTTCTTCAAA
GAAGGACGGGAGGACTTTGGATCATCGCAACTATCTTGAGGCTCAGGGTGACGCAGATAT
TTTCTTCCCAACCGATTTCTGGCTTTTGGAGAAGATCGACCATGACTGCTCTGGTTTCTC
AAAACAGCAAAAGAACCCCGGTGCATTTAAACCAGTTAAGACGAGGAGAACCATCATTCT
TGATTCTGCTGCCTTCATGGAAGAGTTTGGACTGCCGTTGAAGACTAGGACCAAAGATGG
ATATAATCCACTCCTTGATGATTTCAGGAACACCAAGTTCTATCTAAGCGTTCCTACCCA
TAACAAGAAATAGTCATCATATATTATTTCTTGTTATATTTTAGTCTATTCGTTGGTCAG
ATCATACTATCCCATGCGGATAAAAATCGACTTTCGCATTCTTTTAGAGAACAGGAAAGT
CTTTTAGTCGACCGAAGAATCGCAAGTTTGATTTGTCCATTTCTGTACTTCACAAGCTGC
ATGGCTGAAAAGTGGATTATAGTGTACTACACAGGATGTCAGGCCTGCTTCTTTGTGACA
CGGCTTATAATTTGAGAACTTCATTTTAT