Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0911000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:39684691:39687171:-1 gene:Os01g0911000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sas10/Utp3/C1D domain containing protein. (Os01t0911000-01);Hypothetical conserved gene. (Os01t0911000-02)
Sequence

ATGGACAGTGGCGGCACTGCCAGTCCTGCCGGCGTCGCCGGCGACGGCGCTGGTGGCCGG
GGTTCGGTCTTCCGCGGAGATGACGCGCCGAAGCTGCTCGCCGCGTTGAAGGAGATGAAA
GAAGGGCTCGACCTCGTCACCGGCAAGGTCAAGGCGCTCACCCGCAAGGTCAAGAAGAAC
CAGCTGCCGACGGCGGATGGGATTGGGTACCTGGAGGCAAAGCACCACCTGCTGCTGAGC
TACTGCCAGGACATCGTCTACTATCTCCTCCGCAAGGCGAAGGGGCTCTCGGTGGAAGGT
CACCCCGTCGTGCGGAGCCTTGTCGAGATCAGGCTGTTCTTGGAGAAGATTCGTCCCATA
GACAAGAAGATGGAGTACCAAATCCAGAAGCTCACCAACGCCGCGGATAGCGGAGCTGCC
CAGGAGAAGGTGCTAAATGCAGAAGCAAAGAGTAAGGATCAGCCTAAGGATGATGAAGAC
CTACTGAAGTATCGGCCGAACCCTGATATGATGGACTCTAAGATCGATCCTGCGGGGCAG
GACAACGATGGCATCTATCGTCCACCAAAATTTATTGCTGCTACCATGGATGATGAGGAT
AAGCGCCATAAACAAGCTTCAAGGAAAGACAAAACATTAGCGCGAATGGCTACAGAAAGC
TCTTACTTCAAAGAGATTATTGATGACGCTGCTGATAGACCTGAAGAGTTAAAGGAAACA
GCAGGTGATGAAAGCAGGGAATTTACAAGGTATATGCGGCAGAGAGAGTTGCAAGAGAAA
CAAGAAGAGGAGCTGTTCACTCGAGCTCCGCTGACAAAACGTGATAAGCAGACGGAGAAG
TGGATGAGAAAAGAGCTTCACGGGCTACGGGGCCTAACAGATGGATTCGATCTTGGAATT
AACATGTTCGTCGATGGAGACAAGGATAATGATGTCGGTTCAACCGAACCCCATTTCAAG
AGCGGAGGTCGGAGAAAACACCATAAAGGCAAGAGGAAGAGGCATTAG

Peptide Sequence

PEP ID

Os01t0911000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:39684691:39687171:-1 gene:Os01g0911000 transcript:Os01t0911000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sas10/Utp3/C1D domain containing protein. (Os01t0911000-01);Hypothetical conserved gene. (Os01t0911000-02)
Sequence

MDSGGTASPAGVAGDGAGGRGSVFRGDDAPKLLAALKEMKEGLDLVTGKVKALTRKVKKN
QLPTADGIGYLEAKHHLLLSYCQDIVYYLLRKAKGLSVEGHPVVRSLVEIRLFLEKIRPI
DKKMEYQIQKLTNAADSGAAQEKVLNAEAKSKDQPKDDEDLLKYRPNPDMMDSKIDPAGQ
DNDGIYRPPKFIAATMDDEDKRHKQASRKDKTLARMATESSYFKEIIDDAADRPEELKET
AGDESREFTRYMRQRELQEKQEEELFTRAPLTKRDKQTEKWMRKELHGLRGLTDGFDLGI
NMFVDGDKDNDVGSTEPHFKSGGRRKHHKGKRKRH

Transcript Sequence

Transcript ID

Os01t0911000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:39684691:39687171:-1 gene:Os01g0911000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sas10/Utp3/C1D domain containing protein. (Os01t0911000-01);Hypothetical conserved gene. (Os01t0911000-02)
Sequence

ACCCGCCGCCGCCGCCGTCGTCCACACGACCTCACCGCCGCCTCCTCTCCGCTCTCCGGC
CGCCGGTCGCTCCGCCAACCCGACCCTCTCCCCTTCGTGGTGGAGCCAACCTTAACCATC
CTACTCCGCGCGGGGCGAAGGCGTCCGGCGGTTGCAGGAGCCCGATGGACAGTGGCGGCA
CTGCCAGTCCTGCCGGCGTCGCCGGCGACGGCGCTGGTGGCCGGGGTTCGGTCTTCCGCG
GAGATGACGCGCCGAAGCTGCTCGCCGCGTTGAAGGAGATGAAAGAAGGGCTCGACCTCG
TCACCGGCAAGGTCAAGGCGCTCACCCGCAAGGTCAAGAAGAACCAGCTGCCGACGGCGG
ATGGGATTGGGTACCTGGAGGCAAAGCACCACCTGCTGCTGAGCTACTGCCAGGACATCG
TCTACTATCTCCTCCGCAAGGCGAAGGGGCTCTCGGTGGAAGGTCACCCCGTCGTGCGGA
GCCTTGTCGAGATCAGGCTGTTCTTGGAGAAGATTCGTCCCATAGACAAGAAGATGGAGT
ACCAAATCCAGAAGCTCACCAACGCCGCGGATAGCGGAGCTGCCCAGGAGAAGGTGCTAA
ATGCAGAAGCAAAGAGTAAGGATCAGCCTAAGGATGATGAAGACCTACTGAAGTATCGGC
CGAACCCTGATATGATGGACTCTAAGATCGATCCTGCGGGGCAGGACAACGATGGCATCT
ATCGTCCACCAAAATTTATTGCTGCTACCATGGATGATGAGGATAAGCGCCATAAACAAG
CTTCAAGGAAAGACAAAACATTAGCGCGAATGGCTACAGAAAGCTCTTACTTCAAAGAGA
TTATTGATGACGCTGCTGATAGACCTGAAGAGTTAAAGGAAACAGCAGGTGATGAAAGCA
GGGAATTTACAAGGTATATGCGGCAGAGAGAGTTGCAAGAGAAACAAGAAGAGGAGCTGT
TCACTCGAGCTCCGCTGACAAAACGTGATAAGCAGACGGAGAAGTGGATGAGAAAAGAGC
TTCACGGGCTACGGGGCCTAACAGATGGATTCGATCTTGGAATTAACATGTTCGTCGATG
GAGACAAGGATAATGATGTCGGTTCAACCGAACCCCATTTCAAGAGCGGAGGTCGGAGAA
AACACCATAAAGGCAAGAGGAAGAGGCATTAGTGAACCCACAGATGGCGTTTCACACAGC
AATGTCACATTCAAAACCAAAATTTTGATCTGTGCGAATTGAGTAGTATAAATGAGTGAT
TTTCTTCGGCATGAGAGCCATGTTGGTTAGAATCAGCAGGTTTTGTGCATCTATCTGTCA
ACTTGTTCTTCAGTACGCGGTTAAAAGATATTGATCGTCGATACTTAAGTCAATTGGTAA
TCTGTCGTTATGATTTTGTTTGT