Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0908200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:39544235:39548599:1 gene:Os01g0908200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsBT description:Member of the Bric-a-Brac/Tramtrack/Broad (BTB) family, BT1/BT2 ortholog, Negative regulation of nitrate uptake and nitrogen use efficiency (Os01t0908200-01)
Sequence

ATGTGCGAGGGTGTGCGGGCCGCCGGCGACGCCGCCGCCGCCGCCGACGTCGACGTCATC
ACCTCCTCCGGCCGCCGGAGGATCCCCGCGCATTCCACTGTTCTTGCGTCGGCGTCGCCG
GTGCTGGAGAGCATCCTGCAGCGCCGCCTGAAGAAGGAGAGGGACGCCGCCGCCGGCGGC
GGCAAGGTCCGCAGGGCCGTCGTCCTGATCCGCGGCGTCACCGACGACGCCGCGGCCGCC
TTCGTCCGCCTCCTCTACGCCGGCAGCAGTGGTGATGAGGAGGAGATTGACGAGAAGAGC
GCGGCGCAGATGCTGGTGCTGGCGCACGCGTACCGGGTGCCGTGGCTGAAGCGGCGGTGC
GAGGGGGCGATCGGGTCGCGGCTCACGGCGGAGTCGGTGGTGGACACGATGCAGCTGGCG
GCGCTGTGCGACGCGCCGCAGCTGCACCTGCGCTGCACCAGGCTGCTCGCCAAGGAGTTC
AAGGCCGTGGAGAAGACCGAGGCGTGGCGATTCCTCCAGGAGAACGACCCCTGGCTCGAG
CTCGACATCCTCCAGCGCCTCCACGACGCCGACCTGCGGCGGAGGAAGTGGAGGAGGAAG
AGGGCGGAGCAAGGGGTCTACGTGGAGCTGAGCGAGGCGATGGACTGCCTGAGCCACATC
TGCACGGAGGGGTGCACGGAGGTCGGGCCGGTGGGGCGTGCGCCGGCGGCGGCGCCGTGC
CCGGCGTACGCGACGGCGTGCCGGGGACTGCAGCTGCTGATCCGCCACTTCTCCCGGTGC
CACCGCACCAGCTGCCCGCGCTGCCAGCGCATGTGGCAGCTGCTCCGCCTCCACGCCGCC
CTCTGCGACCTCCCCGACGGCCACTGCAACACCCCTCTCTGCATGCAGTTCAGGAGAAAG
GAGGAGGAGAAGGCGGCAGCGAAGGCGAAGGCAAAGGCCGGCGATGATGACGATAAGTGG
GGGCTTCTGGTGAAGAAGGTGAGGGTTGCCAGGGCCATGTCTTCTCTGGGCAAGAGGAGG
CAGATGAGTTGCTCCCAGTGCTGA

Peptide Sequence

PEP ID

Os01t0908200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:39544235:39548599:1 gene:Os01g0908200 transcript:Os01t0908200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsBT description:Member of the Bric-a-Brac/Tramtrack/Broad (BTB) family, BT1/BT2 ortholog, Negative regulation of nitrate uptake and nitrogen use efficiency (Os01t0908200-01)
Sequence

MCEGVRAAGDAAAAADVDVITSSGRRRIPAHSTVLASASPVLESILQRRLKKERDAAAGG
GKVRRAVVLIRGVTDDAAAAFVRLLYAGSSGDEEEIDEKSAAQMLVLAHAYRVPWLKRRC
EGAIGSRLTAESVVDTMQLAALCDAPQLHLRCTRLLAKEFKAVEKTEAWRFLQENDPWLE
LDILQRLHDADLRRRKWRRKRAEQGVYVELSEAMDCLSHICTEGCTEVGPVGRAPAAAPC
PAYATACRGLQLLIRHFSRCHRTSCPRCQRMWQLLRLHAALCDLPDGHCNTPLCMQFRRK
EEEKAAAKAKAKAGDDDDKWGLLVKKVRVARAMSSLGKRRQMSCSQC

Transcript Sequence

Transcript ID

Os01t0908200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:39544235:39548599:1 gene:Os01g0908200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsBT description:Member of the Bric-a-Brac/Tramtrack/Broad (BTB) family, BT1/BT2 ortholog, Negative regulation of nitrate uptake and nitrogen use efficiency (Os01t0908200-01)
Sequence

ATAGTACTCGCACGCCGCGACGCCTCTGCTGAACATTTCGCTCTCTTCCAAGATATTTTT
TCCTCCCACGATTCCTTCCTCCCATCCCTGTGGGGATTCATCGGCTCATCCGTACTAGCA
CAAGATGTGCGAGGGTGTGCGGGCCGCCGGCGACGCCGCCGCCGCCGCCGACGTCGACGT
CATCACCTCCTCCGGCCGCCGGAGGATCCCCGCGCATTCCACTGTTCTTGCGTCGGCGTC
GCCGGTGCTGGAGAGCATCCTGCAGCGCCGCCTGAAGAAGGAGAGGGACGCCGCCGCCGG
CGGCGGCAAGGTCCGCAGGGCCGTCGTCCTGATCCGCGGCGTCACCGACGACGCCGCGGC
CGCCTTCGTCCGCCTCCTCTACGCCGGCAGCAGTGGTGATGAGGAGGAGATTGACGAGAA
GAGCGCGGCGCAGATGCTGGTGCTGGCGCACGCGTACCGGGTGCCGTGGCTGAAGCGGCG
GTGCGAGGGGGCGATCGGGTCGCGGCTCACGGCGGAGTCGGTGGTGGACACGATGCAGCT
GGCGGCGCTGTGCGACGCGCCGCAGCTGCACCTGCGCTGCACCAGGCTGCTCGCCAAGGA
GTTCAAGGCCGTGGAGAAGACCGAGGCGTGGCGATTCCTCCAGGAGAACGACCCCTGGCT
CGAGCTCGACATCCTCCAGCGCCTCCACGACGCCGACCTGCGGCGGAGGAAGTGGAGGAG
GAAGAGGGCGGAGCAAGGGGTCTACGTGGAGCTGAGCGAGGCGATGGACTGCCTGAGCCA
CATCTGCACGGAGGGGTGCACGGAGGTCGGGCCGGTGGGGCGTGCGCCGGCGGCGGCGCC
GTGCCCGGCGTACGCGACGGCGTGCCGGGGACTGCAGCTGCTGATCCGCCACTTCTCCCG
GTGCCACCGCACCAGCTGCCCGCGCTGCCAGCGCATGTGGCAGCTGCTCCGCCTCCACGC
CGCCCTCTGCGACCTCCCCGACGGCCACTGCAACACCCCTCTCTGCATGCAGTTCAGGAG
AAAGGAGGAGGAGAAGGCGGCAGCGAAGGCGAAGGCAAAGGCCGGCGATGATGACGATAA
GTGGGGGCTTCTGGTGAAGAAGGTGAGGGTTGCCAGGGCCATGTCTTCTCTGGGCAAGAG
GAGGCAGATGAGTTGCTCCCAGTGCTGAGCAAGTGCAATCACAGCATCAGCCTGAGACAG
TCAAGAGAAGAGTATTGTAGTATAGAAGGGTACTACTATGTAGTTAGGCATAGTGCATGA
GTGTATTGAAGTGAGCTATTTTTTGGTTTGTTCAAGATGGTTTGGTCTCTCAAGTTTGAG
TTGCTTTACTGTCTTCAATTTGTAGAGTTCTTTTGTGAGGTGAGAGAAATGGGCTGAAAT
CTGTTGTAAAATTGCCTATATCGTAAATAAACTTTTAATAGTGAGGTATATGATCATTAC
AGTTTC