Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0907400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:39493173:39499938:1 gene:Os01g0907400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 705, Jumonji C Domain Protein JMJ705 description:Histone lysine demethylase, Stress-responsive H3K27me3(histon H3 lysine 27 trimethylation) demethylation (Os01t0907400-01)
Sequence	ATGAGGCCCTCGCCGCCTCCCGCCGCCCCGGCGGCGGAACCGGTGCCCCCGTGGCTGAGA TCGCTGCCCGTCGCGCCCGAGTTCCGCCCCACCGCCGCCGAGTTCGCCGATCCCGTCTCC TACATCCTCAAGATCGAGCCCGCCGCGGCGCCGTACGGCATCTGCAAGGTCGTGCCGCCG TTGCCCCCGCCGCCGAAGAAGGCCACCTTCTCCAACCTCTCCCGCTCCTTCGCCGCGCTC CACCCGGACGACCGCTCGCCGTCCTTCCCCACCCGCCACCAGCAGGTCGGCCTCTGCCCG CGCCGCACGCGCCCGGGGCTCAAGCCCGTGTGGCGGTCCTCCCACCGCTACACGCTCCCG CAGTTCGAGTCCAAGGCCGGCGCCACCCGCAAGTCGCTCCTCGCCGGCCTCAACTTCCCT GCCTCCAGGCAACTCACCCCGCTCGACCACGAGGTGCTCTTCTGGCGCGCATCGGCCGAC CGCCCCATCGTGGTCGAGTATGGCAGCGACATGTCGGGCTCGGGATTCTCCCCTTGCGCC GCGCAGCCGCAGCCGCCGCCGCAGCAGCAACCGACGGCGCGGGCGGCGGCGCACCTTGGG GAGACGGCGTGGAACATGCGCGGCGTGGCTAGGAGCCCCGGATCGCTGCTGCGGTTCATG CCGGAGGATGTCCCCGGGGTCACCACGCCGATGCTCTACGTCGGGATGATGTTCAGTTGG TTCGCGTGGCACGTCGAGGACCACGACCTGCACAGCCTCAACTACATGCACCTCGGGGCC GCCAAGACGTGGTACGGCGTGCCGCGCGACGCCGCGCTCGCGTTCGAGGACGTGGTGCGC GAACATGGCTACGGCGGGGAGGTGAACCCCCTAGAAACCTTCGCTACATTGGGGCAGAAA ACAACAGTGATGTCCCCTGAAGTGCTTGTGGAGTCGGGTATCCCCTGCTGCAGATTGGTG CAGAATGCAGGGGAATTTGTGGTCACTTTTCCAGGATCTTATCACTGCGGTTTCAGTCAT GGATTCAACTGTGGGGAAGCATCAAATATAGCTACTCCTGAATGGTTGAGAATAGCAAAA GAGGCAGCAATCCGAAGAGCTTCAATCAATCGTCCTCCCATGGTTTCGCACTATCAATTA CTTTACGATCTCGCACTGTCTATGCGTTTTAGGGAACCATCCAATGGTGAAATGGAGACA CGGAGCTCTCGAATAAAGGAGAAGAAGAAATGCGAAGGGGAACAACTGGTCAAGAAGATG TTCATCCAAAATGTTATTGAAGATAATGAACTGCTTAGTCATCTTCTAAATGACGGATCA TCTTGTATTATTCTTCCAGCAAATGCCCATGATGGTCCTGGTCTTTCTACTTTGCGCTCA ACAGATCAATCAAATATGAATTCCAGAATATCACATAACCTATGCAGTAGGGAAGAAGCT CCAGAAGCCTCAGGATGCTTATCGCCGAACAGGAATGGTGATACCAGAAATTGTATTTCA TCAGATACGCATAACATGGAAGGTGATAAGGGAGATATAATGAGCGCTACTGGATTGTTA GATCAGGGTCTATTATCATGTGTCACTTGTGGAATTTTAAGTTTTTCATGTGTGGCTGTA CTCAAACCAAGAGATTCTACAGCACGATACTTGATGTCTGCTGATTCTAATTCAATTAAT AACCAGCTTTCTATTTCTGGAGGGAGTATTCTGGCAGATGCGCCAACAAATGAAAGGAAT GGTGTCATTTCTCGTCCATATTCTGAACACTGTTGCAACGAAATAATGGCCGATGATGCA GAAATCGATAAGAATTCTGCTCTTGATCTCTTGGCATTTGCTCATGGGGGTCAACCAGAT CCTGAAGAAGATCCACTGGAGAAAATACTGAAGATTGCACATGGCATTAACAAATCACAA CCTAATAGTTCAAATAATGTTGGTTGTGTTGGAACAAAGCTGTCCTCAAGTAGCACAGAG CGCCAAGAAAGACCATCTTCCCAGAACGCTCATTGTAATGGTAGCTCAGTTATTTCAAAT GGACCGAAAGGTGTTCGCACGAGAAATAAGTATCAACTTAAGATGGTACTTTCTGAAGGT TTTCAGGCAAAGGATATCTATTCTGCGAAGGAAAAGAAGGTTCAATCAGAACCATCAAGC TCAAAAGGGGATGTTAAGGAGACAATTGATGTTAGTGGCACAGAGAACGATGTCGGATGT AAAAGCACTACAATCTCTGTCAGTGAACACAGGGGTTCTACAAAGAATATGTATTCAGTG AAGGAAAAGAAGGTTCAATCGAAACCATCAAGCTTAAAGGGGACTGTTAAAGAGACAGTT GATGTCAGTGGCACAGAGAACGATGCTAGATGTAAAAGCATTACAATCTCTGTCAGTGAA CACAGGGGTTCTACACCTATGACCAATAGTTTAGCTGCATCAATCGTGAAACCTGACAAG GATTCATCAAGAATGCATGTATTTTGTCTTGAGCATGCTATTGAGGTTGAGAAGCAACTG CATGCTATAGGTGGTTCTAATATTATGCTTATATGTCGTCCAGAATATCCCAAAATAGAA GCGGAAGCAAGATTGTTGGGTGAAGAAATGGGACTGGTATATGACTGGAAGGGCATTCAT TTCAAGGAGGCCAACATGGAGGACAGGCAGAAGATACAGGAAGTTCTGCGGGATGAGGAA GCAATACCTACAAGCAGTGATTGGGCTGTAAAATTGGGTATTAACCTTTATTATAGTGCA AATCTGGCCAAATCTCCTTTATATAACAAACAAATGCCATACAACAGAGTCATTTATAGG GCATTTGGCTGTGATTCTCCTAATGACTCGCCAGTAATGTTCAATACTTGCGAAAGGAAA CAAAGCCACCAGAAGAAAATAGTGGTTGCTGGCCGGTGGTGTGGGAAAGTATGGATGTCA AAACAGGTCCATCCATACTTGGCTCACAGAGTTGAAAGCCAGGAAGCGGAAGAAGCAGAT AGAATCTGTTCTTATCATTTTGATGAGAAGCACAAAGCTGAGCCAGTTGGGAATTCTAGT AGAGTGGAAGCCTCCAAAAGAAAGAGTAGCAGTTTGACAGACGTAACAGAATCAAGCAAT AGAAGGGGGGAAATACCTGGTGAGGAAACAAACACCAAGAGGCCCAAACATTCTCAAGAG AACAATCTCAGAGCTTTGGAAACCGCTGCTGAAGTTGTGGTGCCCTCACCAGCTGGAACA GGTCTCCGCGTTAGCTCCAGGATTGCCAACAGGGCAAACAAGCTAAAATCAAAGATGGAA AAGGAGGATGTCCCTTCTAGCCGTCCAAAGTCTAACATAAAGGAGAAAAGCAGTCATGCT AGCGGTCAGAAATCAAATGTTCAAGAGGCGAATGCTAATTCTGCTAGCCATTTGAGAGCA ATGCCACCAAAACAGAAGGCTGAAGCAGAAGCAAAGAAGCAAATAAGAACTCCAAAACCT CCAAAGCAAGCAGTGGAGTACTCGTGCGATATTGAGGGTTGTTCTATGAGTTTTCGTACA AAGCGGGACTTGTCTCTGCACAAGAGTGATATCTGCCCAGTGAAAGGCTGCGGGAAGAAG TTCTTCTCGCACAAGTATCTGCTGCAGCATCGCAAGGTTCACACAGATGACCGTCCGCTA ACATGCCCATGGAAGGGCTGCAACATGGCATTCAAGTGGCCATGGGCAAGGACTGAACAT CTCAGGGTTCATACAGGCGACAGGCCCTATGTTTGCCATGAGCCAGGTTGCGCACAGACA TTCAGGTTTGTCTCAGATTTCAGCCGTCACAAGCGCAAGACAGGTCATTCTGTCAAGAAG AAGAAGAAAGCAAAGAGTTGA

Peptide Sequence

PEP ID	Os01t0907400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:39493173:39499938:1 gene:Os01g0907400 transcript:Os01t0907400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 705, Jumonji C Domain Protein JMJ705 description:Histone lysine demethylase, Stress-responsive H3K27me3(histon H3 lysine 27 trimethylation) demethylation (Os01t0907400-01)
Sequence	MRPSPPPAAPAAEPVPPWLRSLPVAPEFRPTAAEFADPVSYILKIEPAAAPYGICKVVPP LPPPPKKATFSNLSRSFAALHPDDRSPSFPTRHQQVGLCPRRTRPGLKPVWRSSHRYTLP QFESKAGATRKSLLAGLNFPASRQLTPLDHEVLFWRASADRPIVVEYGSDMSGSGFSPCA AQPQPPPQQQPTARAAAHLGETAWNMRGVARSPGSLLRFMPEDVPGVTTPMLYVGMMFSW FAWHVEDHDLHSLNYMHLGAAKTWYGVPRDAALAFEDVVREHGYGGEVNPLETFATLGQK TTVMSPEVLVESGIPCCRLVQNAGEFVVTFPGSYHCGFSHGFNCGEASNIATPEWLRIAK EAAIRRASINRPPMVSHYQLLYDLALSMRFREPSNGEMETRSSRIKEKKKCEGEQLVKKM FIQNVIEDNELLSHLLNDGSSCIILPANAHDGPGLSTLRSTDQSNMNSRISHNLCSREEA PEASGCLSPNRNGDTRNCISSDTHNMEGDKGDIMSATGLLDQGLLSCVTCGILSFSCVAV LKPRDSTARYLMSADSNSINNQLSISGGSILADAPTNERNGVISRPYSEHCCNEIMADDA EIDKNSALDLLAFAHGGQPDPEEDPLEKILKIAHGINKSQPNSSNNVGCVGTKLSSSSTE RQERPSSQNAHCNGSSVISNGPKGVRTRNKYQLKMVLSEGFQAKDIYSAKEKKVQSEPSS SKGDVKETIDVSGTENDVGCKSTTISVSEHRGSTKNMYSVKEKKVQSKPSSLKGTVKETV DVSGTENDARCKSITISVSEHRGSTPMTNSLAASIVKPDKDSSRMHVFCLEHAIEVEKQL HAIGGSNIMLICRPEYPKIEAEARLLGEEMGLVYDWKGIHFKEANMEDRQKIQEVLRDEE AIPTSSDWAVKLGINLYYSANLAKSPLYNKQMPYNRVIYRAFGCDSPNDSPVMFNTCERK QSHQKKIVVAGRWCGKVWMSKQVHPYLAHRVESQEAEEADRICSYHFDEKHKAEPVGNSS RVEASKRKSSSLTDVTESSNRRGEIPGEETNTKRPKHSQENNLRALETAAEVVVPSPAGT GLRVSSRIANRANKLKSKMEKEDVPSSRPKSNIKEKSSHASGQKSNVQEANANSASHLRA MPPKQKAEAEAKKQIRTPKPPKQAVEYSCDIEGCSMSFRTKRDLSLHKSDICPVKGCGKK FFSHKYLLQHRKVHTDDRPLTCPWKGCNMAFKWPWARTEHLRVHTGDRPYVCHEPGCAQT FRFVSDFSRHKRKTGHSVKKKKKAKS

Transcript Sequence

Transcript ID	Os01t0907400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:39493173:39499938:1 gene:Os01g0907400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 705, Jumonji C Domain Protein JMJ705 description:Histone lysine demethylase, Stress-responsive H3K27me3(histon H3 lysine 27 trimethylation) demethylation (Os01t0907400-01)
Sequence	ATTCCCATTTCCTCTCGCTCCCACCAAGACCAACCAAACCCCTGTTTCTCCCTCAAAACC TCCCTCTCTTTCCCCCCCGAATGCTCGAGCGCTGCGCGGCGGAATCCCCTACTCCCCTCC GATGAGGCCCTCGCCGCCTCCCGCCGCCCCGGCGGCGGAACCGGTGCCCCCGTGGCTGAG ATCGCTGCCCGTCGCGCCCGAGTTCCGCCCCACCGCCGCCGAGTTCGCCGATCCCGTCTC CTACATCCTCAAGATCGAGCCCGCCGCGGCGCCGTACGGCATCTGCAAGGTCGTGCCGCC GTTGCCCCCGCCGCCGAAGAAGGCCACCTTCTCCAACCTCTCCCGCTCCTTCGCCGCGCT CCACCCGGACGACCGCTCGCCGTCCTTCCCCACCCGCCACCAGCAGGTCGGCCTCTGCCC GCGCCGCACGCGCCCGGGGCTCAAGCCCGTGTGGCGGTCCTCCCACCGCTACACGCTCCC GCAGTTCGAGTCCAAGGCCGGCGCCACCCGCAAGTCGCTCCTCGCCGGCCTCAACTTCCC TGCCTCCAGGCAACTCACCCCGCTCGACCACGAGGTGCTCTTCTGGCGCGCATCGGCCGA CCGCCCCATCGTGGTCGAGTATGGCAGCGACATGTCGGGCTCGGGATTCTCCCCTTGCGC CGCGCAGCCGCAGCCGCCGCCGCAGCAGCAACCGACGGCGCGGGCGGCGGCGCACCTTGG GGAGACGGCGTGGAACATGCGCGGCGTGGCTAGGAGCCCCGGATCGCTGCTGCGGTTCAT GCCGGAGGATGTCCCCGGGGTCACCACGCCGATGCTCTACGTCGGGATGATGTTCAGTTG GTTCGCGTGGCACGTCGAGGACCACGACCTGCACAGCCTCAACTACATGCACCTCGGGGC CGCCAAGACGTGGTACGGCGTGCCGCGCGACGCCGCGCTCGCGTTCGAGGACGTGGTGCG CGAACATGGCTACGGCGGGGAGGTGAACCCCCTAGAAACCTTCGCTACATTGGGGCAGAA AACAACAGTGATGTCCCCTGAAGTGCTTGTGGAGTCGGGTATCCCCTGCTGCAGATTGGT GCAGAATGCAGGGGAATTTGTGGTCACTTTTCCAGGATCTTATCACTGCGGTTTCAGTCA TGGATTCAACTGTGGGGAAGCATCAAATATAGCTACTCCTGAATGGTTGAGAATAGCAAA AGAGGCAGCAATCCGAAGAGCTTCAATCAATCGTCCTCCCATGGTTTCGCACTATCAATT ACTTTACGATCTCGCACTGTCTATGCGTTTTAGGGAACCATCCAATGGTGAAATGGAGAC ACGGAGCTCTCGAATAAAGGAGAAGAAGAAATGCGAAGGGGAACAACTGGTCAAGAAGAT GTTCATCCAAAATGTTATTGAAGATAATGAACTGCTTAGTCATCTTCTAAATGACGGATC ATCTTGTATTATTCTTCCAGCAAATGCCCATGATGGTCCTGGTCTTTCTACTTTGCGCTC AACAGATCAATCAAATATGAATTCCAGAATATCACATAACCTATGCAGTAGGGAAGAAGC TCCAGAAGCCTCAGGATGCTTATCGCCGAACAGGAATGGTGATACCAGAAATTGTATTTC ATCAGATACGCATAACATGGAAGGTGATAAGGGAGATATAATGAGCGCTACTGGATTGTT AGATCAGGGTCTATTATCATGTGTCACTTGTGGAATTTTAAGTTTTTCATGTGTGGCTGT ACTCAAACCAAGAGATTCTACAGCACGATACTTGATGTCTGCTGATTCTAATTCAATTAA TAACCAGCTTTCTATTTCTGGAGGGAGTATTCTGGCAGATGCGCCAACAAATGAAAGGAA TGGTGTCATTTCTCGTCCATATTCTGAACACTGTTGCAACGAAATAATGGCCGATGATGC AGAAATCGATAAGAATTCTGCTCTTGATCTCTTGGCATTTGCTCATGGGGGTCAACCAGA TCCTGAAGAAGATCCACTGGAGAAAATACTGAAGATTGCACATGGCATTAACAAATCACA ACCTAATAGTTCAAATAATGTTGGTTGTGTTGGAACAAAGCTGTCCTCAAGTAGCACAGA GCGCCAAGAAAGACCATCTTCCCAGAACGCTCATTGTAATGGTAGCTCAGTTATTTCAAA TGGACCGAAAGGTGTTCGCACGAGAAATAAGTATCAACTTAAGATGGTACTTTCTGAAGG TTTTCAGGCAAAGGATATCTATTCTGCGAAGGAAAAGAAGGTTCAATCAGAACCATCAAG CTCAAAAGGGGATGTTAAGGAGACAATTGATGTTAGTGGCACAGAGAACGATGTCGGATG TAAAAGCACTACAATCTCTGTCAGTGAACACAGGGGTTCTACAAAGAATATGTATTCAGT GAAGGAAAAGAAGGTTCAATCGAAACCATCAAGCTTAAAGGGGACTGTTAAAGAGACAGT TGATGTCAGTGGCACAGAGAACGATGCTAGATGTAAAAGCATTACAATCTCTGTCAGTGA ACACAGGGGTTCTACACCTATGACCAATAGTTTAGCTGCATCAATCGTGAAACCTGACAA GGATTCATCAAGAATGCATGTATTTTGTCTTGAGCATGCTATTGAGGTTGAGAAGCAACT GCATGCTATAGGTGGTTCTAATATTATGCTTATATGTCGTCCAGAATATCCCAAAATAGA AGCGGAAGCAAGATTGTTGGGTGAAGAAATGGGACTGGTATATGACTGGAAGGGCATTCA TTTCAAGGAGGCCAACATGGAGGACAGGCAGAAGATACAGGAAGTTCTGCGGGATGAGGA AGCAATACCTACAAGCAGTGATTGGGCTGTAAAATTGGGTATTAACCTTTATTATAGTGC AAATCTGGCCAAATCTCCTTTATATAACAAACAAATGCCATACAACAGAGTCATTTATAG GGCATTTGGCTGTGATTCTCCTAATGACTCGCCAGTAATGTTCAATACTTGCGAAAGGAA ACAAAGCCACCAGAAGAAAATAGTGGTTGCTGGCCGGTGGTGTGGGAAAGTATGGATGTC AAAACAGGTCCATCCATACTTGGCTCACAGAGTTGAAAGCCAGGAAGCGGAAGAAGCAGA TAGAATCTGTTCTTATCATTTTGATGAGAAGCACAAAGCTGAGCCAGTTGGGAATTCTAG TAGAGTGGAAGCCTCCAAAAGAAAGAGTAGCAGTTTGACAGACGTAACAGAATCAAGCAA TAGAAGGGGGGAAATACCTGGTGAGGAAACAAACACCAAGAGGCCCAAACATTCTCAAGA GAACAATCTCAGAGCTTTGGAAACCGCTGCTGAAGTTGTGGTGCCCTCACCAGCTGGAAC AGGTCTCCGCGTTAGCTCCAGGATTGCCAACAGGGCAAACAAGCTAAAATCAAAGATGGA AAAGGAGGATGTCCCTTCTAGCCGTCCAAAGTCTAACATAAAGGAGAAAAGCAGTCATGC TAGCGGTCAGAAATCAAATGTTCAAGAGGCGAATGCTAATTCTGCTAGCCATTTGAGAGC AATGCCACCAAAACAGAAGGCTGAAGCAGAAGCAAAGAAGCAAATAAGAACTCCAAAACC TCCAAAGCAAGCAGTGGAGTACTCGTGCGATATTGAGGGTTGTTCTATGAGTTTTCGTAC AAAGCGGGACTTGTCTCTGCACAAGAGTGATATCTGCCCAGTGAAAGGCTGCGGGAAGAA GTTCTTCTCGCACAAGTATCTGCTGCAGCATCGCAAGGTTCACACAGATGACCGTCCGCT AACATGCCCATGGAAGGGCTGCAACATGGCATTCAAGTGGCCATGGGCAAGGACTGAACA TCTCAGGGTTCATACAGGCGACAGGCCCTATGTTTGCCATGAGCCAGGTTGCGCACAGAC ATTCAGGTTTGTCTCAGATTTCAGCCGTCACAAGCGCAAGACAGGTCATTCTGTCAAGAA GAAGAAGAAAGCAAAGAGTTGAGCTCGTATTACAGCAAGCTAGTTATGGTAGAACCGGAC GCAGTAGGAGGTAGTTTGTACATTCTACTTCACTAGTTTAGCACTGATCTCTCTATCTGA CGGATTCTGTTGGCACCACAATCGGTGTGCTTTGTGTTAGTTTATATTAGTTTTCATGAT TACT