Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0906600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:39467660:39473818:-1 gene:Os01g0906600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os01t0906600-01)
Sequence	ATGCTAGCCGACCTCAACGTCGACCCGCCGGAGAGCGACGGCGAGGACCAACCACCAACT CCCAACCCCAACGTAAACCCCGCCACCGCCGCCGTCACCGCGGCGACGGTGGTCGCCATC GATTCCTCCACTAGGAGTAGCAATGATGAGGGTAGTTTGGCAAAAAGCGTGATCACAACG AAGGAACCTGATACTGTTGAATGCGAAGATGCTGATCAACATTGTCAAGGGGCTTCTGTT GCACGCGAAGAGAAAGTTAGCAACCTGAAAGCTGCTTTGGTACATGTGGCACGGAAGATG CCTAAAAATGCCCATGCACATTTTATGTTGGGTTTGATGTACCAAAGGCTTGGTCAGCCA CAGAAGGCAATAGCGGCATATGAGAAGTCATCTGAGATATTGTTACAAGATGAAGAAGAA GTTCGAAGGCCTGATTTGCTCTCATCAGTGAGGATACACCATGCTCAGTGCATTTTGCAA ACAAGTATGGGTGACACTTTTGATGAAGAGCTTGAATCTGGTGAACTAGATGAAATCCTT GTTAAAATGAAGAGTTCAGTTGAATCTGACCCCAGACAGGCAGCTGTTTGGAATATCCTT GGTTTGGTTCTTCTTCGTAGTGGTCAGCTTCAGAGTGCTATCTCAGTTTTATCTTCTCTG ACGGTTGTTGCTCCAGATTACTTGGACTCTCTTGCGAATCTTGGTGTTGCCTACATTCAA AGTGGGAATCTAGAACTGGCCACAAAATGCTTTCAAGAACTTGTTATAAAAGATCAAAAC CACCCAGCTGCTCTGGTGAACTATGCAGCTCTCCTTCTCTGTAAATATGGATCTTTTGCT GCAGGGTCAGGTGGTAATGTTAGTGCAGGCTCTTGTCTGCATCAGAAAGAAGGCTTAGCT GTTGCAAAAGAGTGCTTACTTGCAGCAGTGAAGGCTGATCCTAAAGCTGCATCAGTATGG GTTAATCTTGCAAATGCATATTACATGGCTGGTGAACACAGAAATTCAAAGAGATGCTTG GAACAGGCAGCAAAGCATGAACCCAGTCATATGCCCGCTCGGTATGCTATTGCAGTTCAC CGAATCAGAGATGCTGTCAGATCACAGTGTTCTGATGATCAACTTCTTTGGGCTTCAAAT GAAATGGCAACAGTTCTAAAAGAAGGAGACCCTTCAGCAGTTGATGCCCCAATTGCATGG GCAGGGTTGGCAATGGCTCATAGGGCACAGCATGAAATCGCTGCTGCTTATGATACTGAA CAAATTAATCTGAGTGATGTAGAAGAGCGAGCTCTTTATACACTAAAACAGGCTATCCAA GAGGACCCAGATGATGCTGTTCAATGGCATCAACTTGGTTTGTACAATATTTGCACCACT CAGTTTAGCCGATCGGTAAATTTCCTTAAAGCTGCTGTAGCTCGTTCGCCAGATTGCAGC TATGTGTGGTCAAATCTTGGTATTGCATTGCAACTATCAGACGATTCATCCTGTGAGACT GTATATAAACGAGCACTCATCCTGTCTTCAAGCCAGCAGTCGTATGCAATCCTCTCCAAT CTTGGAATTCTTTACCGACAGCATGGGAGGTATGAACTTGCAAGAAGGATGCTACTGCGG TCGTTGGAACTATGTCCTGGACATGCCCCAGCCAACAACAACCTGGGGCTTGTATCTATT GCAGAGGGCCGTTATGAGGAAGCTATTAGCTGTTTTGAGAAGTCTCTGCAATCTGATCCG CTGCTTGATGCTGCCAAATCAAACTTGGCAAAAGTTCTCGCATTGTCCAAGAAACAGTAG

Peptide Sequence

PEP ID	Os01t0906600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:39467660:39473818:-1 gene:Os01g0906600 transcript:Os01t0906600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os01t0906600-01)
Sequence	MLADLNVDPPESDGEDQPPTPNPNVNPATAAVTAATVVAIDSSTRSSNDEGSLAKSVITT KEPDTVECEDADQHCQGASVAREEKVSNLKAALVHVARKMPKNAHAHFMLGLMYQRLGQP QKAIAAYEKSSEILLQDEEEVRRPDLLSSVRIHHAQCILQTSMGDTFDEELESGELDEIL VKMKSSVESDPRQAAVWNILGLVLLRSGQLQSAISVLSSLTVVAPDYLDSLANLGVAYIQ SGNLELATKCFQELVIKDQNHPAALVNYAALLLCKYGSFAAGSGGNVSAGSCLHQKEGLA VAKECLLAAVKADPKAASVWVNLANAYYMAGEHRNSKRCLEQAAKHEPSHMPARYAIAVH RIRDAVRSQCSDDQLLWASNEMATVLKEGDPSAVDAPIAWAGLAMAHRAQHEIAAAYDTE QINLSDVEERALYTLKQAIQEDPDDAVQWHQLGLYNICTTQFSRSVNFLKAAVARSPDCS YVWSNLGIALQLSDDSSCETVYKRALILSSSQQSYAILSNLGILYRQHGRYELARRMLLR SLELCPGHAPANNNLGLVSIAEGRYEEAISCFEKSLQSDPLLDAAKSNLAKVLALSKKQ

Transcript Sequence

Transcript ID	Os01t0906600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:39467660:39473818:-1 gene:Os01g0906600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os01t0906600-01)
Sequence	ACAGAAAACAGCGAATCACGCGACGCGAAAGGACGGAGAGAGAGGACTGAGGGAGAGCTG GAGAGCGAGAGATTCCGGCGTCTCCGCCTCGCCGTCCCCCGTCTCCCCGCCGCCGCCGCC GCCGCAGTAGCAGCCGAGGCCGGTCATGCTAGCCGACCTCAACGTCGACCCGCCGGAGAG CGACGGCGAGGACCAACCACCAACTCCCAACCCCAACGTAAACCCCGCCACCGCCGCCGT CACCGCGGCGACGGTGGTCGCCATCGATTCCTCCACTAGGAGTAGCAATGATGAGGGTAG TTTGGCAAAAAGCGTGATCACAACGAAGGAACCTGATACTGTTGAATGCGAAGATGCTGA TCAACATTGTCAAGGGGCTTCTGTTGCACGCGAAGAGAAAGTTAGCAACCTGAAAGCTGC TTTGGTACATGTGGCACGGAAGATGCCTAAAAATGCCCATGCACATTTTATGTTGGGTTT GATGTACCAAAGGCTTGGTCAGCCACAGAAGGCAATAGCGGCATATGAGAAGTCATCTGA GATATTGTTACAAGATGAAGAAGAAGTTCGAAGGCCTGATTTGCTCTCATCAGTGAGGAT ACACCATGCTCAGTGCATTTTGCAAACAAGTATGGGTGACACTTTTGATGAAGAGCTTGA ATCTGGTGAACTAGATGAAATCCTTGTTAAAATGAAGAGTTCAGTTGAATCTGACCCCAG ACAGGCAGCTGTTTGGAATATCCTTGGTTTGGTTCTTCTTCGTAGTGGTCAGCTTCAGAG TGCTATCTCAGTTTTATCTTCTCTGACGGTTGTTGCTCCAGATTACTTGGACTCTCTTGC GAATCTTGGTGTTGCCTACATTCAAAGTGGGAATCTAGAACTGGCCACAAAATGCTTTCA AGAACTTGTTATAAAAGATCAAAACCACCCAGCTGCTCTGGTGAACTATGCAGCTCTCCT TCTCTGTAAATATGGATCTTTTGCTGCAGGGTCAGGTGGTAATGTTAGTGCAGGCTCTTG TCTGCATCAGAAAGAAGGCTTAGCTGTTGCAAAAGAGTGCTTACTTGCAGCAGTGAAGGC TGATCCTAAAGCTGCATCAGTATGGGTTAATCTTGCAAATGCATATTACATGGCTGGTGA ACACAGAAATTCAAAGAGATGCTTGGAACAGGCAGCAAAGCATGAACCCAGTCATATGCC CGCTCGGTATGCTATTGCAGTTCACCGAATCAGAGATGCTGTCAGATCACAGTGTTCTGA TGATCAACTTCTTTGGGCTTCAAATGAAATGGCAACAGTTCTAAAAGAAGGAGACCCTTC AGCAGTTGATGCCCCAATTGCATGGGCAGGGTTGGCAATGGCTCATAGGGCACAGCATGA AATCGCTGCTGCTTATGATACTGAACAAATTAATCTGAGTGATGTAGAAGAGCGAGCTCT TTATACACTAAAACAGGCTATCCAAGAGGACCCAGATGATGCTGTTCAATGGCATCAACT TGGTTTGTACAATATTTGCACCACTCAGTTTAGCCGATCGGTAAATTTCCTTAAAGCTGC TGTAGCTCGTTCGCCAGATTGCAGCTATGTGTGGTCAAATCTTGGTATTGCATTGCAACT ATCAGACGATTCATCCTGTGAGACTGTATATAAACGAGCACTCATCCTGTCTTCAAGCCA GCAGTCGTATGCAATCCTCTCCAATCTTGGAATTCTTTACCGACAGCATGGGAGGTATGA ACTTGCAAGAAGGATGCTACTGCGGTCGTTGGAACTATGTCCTGGACATGCCCCAGCCAA CAACAACCTGGGGCTTGTATCTATTGCAGAGGGCCGTTATGAGGAAGCTATTAGCTGTTT TGAGAAGTCTCTGCAATCTGATCCGCTGCTTGATGCTGCCAAATCAAACTTGGCAAAAGT TCTCGCATTGTCCAAGAAACAGTAGATGAACAAAAGACAAAAGATGCCCTTTGACTAGAG CTTTAAACATGAACAGCATTCATAATGTAGAACGTCGCAATGGAGCTAACTCAGAAGCTG ATAGTACTTGGTGGCTATGGACTTCTCACAGGTTCACAGGTCACAGCATAAGGAACTGCA GCTTCATATGGTTCCCTTGGAATTTGACTAAATTATTGCCCTTTGTGCAGAGGACCATAA GGCCCTGGAGTTGGTCCGCCAGTTGTACAAGCTATGAGCTATCCATAGTGCCCCTTCACT CTAGTGAAGGCTCACGTTTTGAAGTATAAAATTTCATTGTAACAAGCATGTACTAGGATT TCCTACTACTGCAGTACATAACACCTCAGAAGTTTTAGGCTTTTAGCTGTAATAGCTGTA CCAGTCCAAGCTTTAGCTGTAAACAATTACAACATTAGTCTTGTGGCAAACGATGCTAGA TGCTGGCTTTGCCATTGAATTCGAATCCATGTAACCTCTGTTGGTTTGATCCGAAAACAT TCATTAATTAATGTTGC