Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0904700-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:39387278:39391014:-1 gene:Os01g0904700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-TYPE RESPONSE REGULATOR 6 description:B-type response regulator, Cytokinin signaling (Os01t0904700-01)
Sequence

ATGGACGCCACCGCCTTCCCCTACGGGCTGCGCGTCCTCGTCGTGGACGACGACCCCACC
TGGCTCAAGATCCTCGAGAAGATGCTCAGGAAGTGTTCCTACGAAGTCACCACATGTGGC
CTGGCAAGAGTTGCTCTGGATATTCTCCGGGAGAGGAAAAACAAGTTCGACATTGTAATT
AGCGATGTCAACATGCCTGATATGGATGGTTTCAAGCTTCTGGAACACATTGGACTTGAG
ATGGATCTTCCTGTTATAATGATGTCCATTGATGGTGAGACAAGTAGGGTGATGAAAGGT
GTCCAGCATGGTGCTTGTGATTACCTCCTTAAACCTGTTCGAATGAAGGAGCTCCGCAAT
ATTTGGCAGCACGTGTATAGGAAGAAAATGCATGAGGTTAAAGAGATCGAAGGTAATGAT
AGCTGCGACGATCTTCAAATACTAAGAAACAGTTTTGAGGGACTGGATGAGAAGAGCCTT
TTTATGAGATCTGACTCTGATACCATGAGGAAGAGAAAAGATGTGGACAAAGACCATGCA
GATCAGGAGTCAAGCGATGGCAACACTGTTAAAAAGGCTAGAGTTGTTTGGTCTGTTGAT
CTTCACCAAAAGTTCGTAAATGCTGTCAACCAAATTGGATTTGACAAAGTTGGACCAAAG
AAAATACTGGACTTGATGAATGTTCCTGGCTTAACAAGAGAAAACGTTGCTAGCCATCTA
CAGAAATATCGCCTCTACCTGAGTAGGTTGCAAAAGCAGAATGAGGAAAGGATATTAGGC
GCTGCTAGGCAAGATTTCAGTCACAAGGGAACATCAGAAAACCTTAACCTCCGAAGTTCC
TTCCAAGAGCAACCAAGCAACATAGCAAATGGATATCCGCATGCTTCTCAGAATATACAA
ACTCAGGCCAACATGCTAGATTCTCAGCTAGAGGACACCAAGAGCACAGTGCCCTTGCCT
GTGCCAGATAAAAAAAGAACTCTAGCAAGTGATGCTGCTGACTCACAGAATGTCACCAGT
GCTTCAAGTTTAGGTGGGGTTCTGTCTTTCAAAAGCATGCCGGTGAATCAGGACAGGAAG
CCATCAGAAACAATGATCTTGGAATGCCAGGCCTGGACCGGAGGCATTCCATCGAAGCAG
TTCATGCAGTATCCAAAGCATAACCATGAACGCTGTGACCTATTAGGGGATTATTCATGC
CTGCCAAAGCCAGACTTAGAACACCCAGTTGGCCCTAGTAATCTGTATGCTCCACCACCT
CTTATCTCAATGAGTTGCGGTATGGAGGGGGATGCCAGAGACTTCTCAGACGTGAAGCCA
GCTATTATGGACTGCATCAAGTCCTTATCACCGGCGTTGACATGTACAGTGGATTCAGTT
TCTGTTCAACTTAGCGACAGTGTGGTGACCTCGATTGACGGTGACCTGAAGTCTTCCGGT
GTGGACGGGTTGCCCAGCATTAAAGATTGTTGCCTTGATCAGACGAACAGCCAAGGAAGT
TTGCGTCCTTCGCAAGAGCCAAGTATCATAGGCAGCACAGAGTTGGCTTCTCTGCCTGAG
GACTTACCCAGTTATCCACTTCACGGTGTCTCCCTTGAGAATATAGGACTGAGTAGCATT
GACTTACTAAACTACAGTGACGCAATGATACTATCCGGACTACAAAGTAACTGGTATGAT
GATCTAGAGTTTAGCAGCGAAATGATGGACTATCCATCGATAGATGAATGTCTCTTTGCA
TCATCCTGA

Peptide Sequence

PEP ID

Os01t0904700-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:39387278:39391014:-1 gene:Os01g0904700 transcript:Os01t0904700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-TYPE RESPONSE REGULATOR 6 description:B-type response regulator, Cytokinin signaling (Os01t0904700-01)
Sequence

MDATAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVI
SDVNMPDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRN
IWQHVYRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMRKRKDVDKDHA
DQESSDGNTVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASHL
QKYRLYLSRLQKQNEERILGAARQDFSHKGTSENLNLRSSFQEQPSNIANGYPHASQNIQ
TQANMLDSQLEDTKSTVPLPVPDKKRTLASDAADSQNVTSASSLGGVLSFKSMPVNQDRK
PSETMILECQAWTGGIPSKQFMQYPKHNHERCDLLGDYSCLPKPDLEHPVGPSNLYAPPP
LISMSCGMEGDARDFSDVKPAIMDCIKSLSPALTCTVDSVSVQLSDSVVTSIDGDLKSSG
VDGLPSIKDCCLDQTNSQGSLRPSQEPSIIGSTELASLPEDLPSYPLHGVSLENIGLSSI
DLLNYSDAMILSGLQSNWYDDLEFSSEMMDYPSIDECLFASS

Transcript Sequence

Transcript ID

Os01t0904700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:39387278:39391014:-1 gene:Os01g0904700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-TYPE RESPONSE REGULATOR 6 description:B-type response regulator, Cytokinin signaling (Os01t0904700-01)
Sequence

ATGGACGCCACCGCCTTCCCCTACGGGCTGCGCGTCCTCGTCGTGGACGACGACCCCACC
TGGCTCAAGATCCTCGAGAAGATGCTCAGGAAGTGTTCCTACGAAGTCACCACATGTGGC
CTGGCAAGAGTTGCTCTGGATATTCTCCGGGAGAGGAAAAACAAGTTCGACATTGTAATT
AGCGATGTCAACATGCCTGATATGGATGGTTTCAAGCTTCTGGAACACATTGGACTTGAG
ATGGATCTTCCTGTTATAATGATGTCCATTGATGGTGAGACAAGTAGGGTGATGAAAGGT
GTCCAGCATGGTGCTTGTGATTACCTCCTTAAACCTGTTCGAATGAAGGAGCTCCGCAAT
ATTTGGCAGCACGTGTATAGGAAGAAAATGCATGAGGTTAAAGAGATCGAAGGTAATGAT
AGCTGCGACGATCTTCAAATACTAAGAAACAGTTTTGAGGGACTGGATGAGAAGAGCCTT
TTTATGAGATCTGACTCTGATACCATGAGGAAGAGAAAAGATGTGGACAAAGACCATGCA
GATCAGGAGTCAAGCGATGGCAACACTGTTAAAAAGGCTAGAGTTGTTTGGTCTGTTGAT
CTTCACCAAAAGTTCGTAAATGCTGTCAACCAAATTGGATTTGACAAAGTTGGACCAAAG
AAAATACTGGACTTGATGAATGTTCCTGGCTTAACAAGAGAAAACGTTGCTAGCCATCTA
CAGAAATATCGCCTCTACCTGAGTAGGTTGCAAAAGCAGAATGAGGAAAGGATATTAGGC
GCTGCTAGGCAAGATTTCAGTCACAAGGGAACATCAGAAAACCTTAACCTCCGAAGTTCC
TTCCAAGAGCAACCAAGCAACATAGCAAATGGATATCCGCATGCTTCTCAGAATATACAA
ACTCAGGCCAACATGCTAGATTCTCAGCTAGAGGACACCAAGAGCACAGTGCCCTTGCCT
GTGCCAGATAAAAAAAGAACTCTAGCAAGTGATGCTGCTGACTCACAGAATGTCACCAGT
GCTTCAAGTTTAGGTGGGGTTCTGTCTTTCAAAAGCATGCCGGTGAATCAGGACAGGAAG
CCATCAGAAACAATGATCTTGGAATGCCAGGCCTGGACCGGAGGCATTCCATCGAAGCAG
TTCATGCAGTATCCAAAGCATAACCATGAACGCTGTGACCTATTAGGGGATTATTCATGC
CTGCCAAAGCCAGACTTAGAACACCCAGTTGGCCCTAGTAATCTGTATGCTCCACCACCT
CTTATCTCAATGAGTTGCGGTATGGAGGGGGATGCCAGAGACTTCTCAGACGTGAAGCCA
GCTATTATGGACTGCATCAAGTCCTTATCACCGGCGTTGACATGTACAGTGGATTCAGTT
TCTGTTCAACTTAGCGACAGTGTGGTGACCTCGATTGACGGTGACCTGAAGTCTTCCGGT
GTGGACGGGTTGCCCAGCATTAAAGATTGTTGCCTTGATCAGACGAACAGCCAAGGAAGT
TTGCGTCCTTCGCAAGAGCCAAGTATCATAGGCAGCACAGAGTTGGCTTCTCTGCCTGAG
GACTTACCCAGTTATCCACTTCACGGTGTCTCCCTTGAGAATATAGGACTGAGTAGCATT
GACTTACTAAACTACAGTGACGCAATGATACTATCCGGACTACAAAGTAACTGGTATGAT
GATCTAGAGTTTAGCAGCGAAATGATGGACTATCCATCGATAGATGAATGTCTCTTTGCA
TCATCCTGAGCTGCCGCCCTTCTTTCGACAATGCTATTTTGCGAGGAAGGATGATGTTCT
TTGGTATGTTCCCATATAGCTCCTCTTGTAGGGCTATAGTCAGCTAACTTGATCCTACGG
TGGAAGGATTTAATTGTAGTATCTCCACTTTTGATAAATGTCTGTATTATAGACTGTGCC
ATGGTATAAGCTATATACCTTTTGAATGATC