Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0901800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:39267216:39269329:-1 gene:Os01g0901800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to acid phosphatase/vanadium-dependent haloperoxidase related. (Os01t0901800-01);Acid phosphatase/vanadium-dependent haloperoxidase related family protein. (Os01t0901800-02)
Sequence

ATGGGCGACGACGGTGGTGGTGATGGCGGCGCCTCCTCCGCGGGATTCTCCTACTTCGCC
GTCTTCCACAACTACCCCCTCGTCGCCGCCTTGCTGGGCTTCGCCGTCGCGCAGTCCATC
AAGTTCTTCGTCACCCGGTATAAGGAGAACAGATGGGATCCTAAGCAGCTTATCGGTTCT
GGTGGCATGCCATCGTCACATTCTGCCACAGTTACAGCACTAGCTGTAGCGATTGGCTTC
CAAGATGGTTTTGGCTGTGCCCTATTTGCGACAGCAGCAATATTCGCAAGTGTGGTTATG
TACGATGCTTCTGGTATCAGATTACATGCTGGAAAGCAAGCAGAGGTGTTGAATCAAATA
GTCTGCGAACTTCCTTCTGAACATCCCTTGTCTGAAACAAGACCATTGCGTGAACTCTTA
GGCCATACTCCAACCCAGGTTTGCTCAAATGCCATTTTCACTAATCATTTTATTATACTG
CACCAATCGAAAGCGATGTCATATTGA

Peptide Sequence

PEP ID

Os01t0901800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:39267216:39269329:-1 gene:Os01g0901800 transcript:Os01t0901800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to acid phosphatase/vanadium-dependent haloperoxidase related. (Os01t0901800-01);Acid phosphatase/vanadium-dependent haloperoxidase related family protein. (Os01t0901800-02)
Sequence

MGDDGGGDGGASSAGFSYFAVFHNYPLVAALLGFAVAQSIKFFVTRYKENRWDPKQLIGS
GGMPSSHSATVTALAVAIGFQDGFGCALFATAAIFASVVMYDASGIRLHAGKQAEVLNQI
VCELPSEHPLSETRPLRELLGHTPTQVCSNAIFTNHFIILHQSKAMSY

Transcript Sequence

Transcript ID

Os01t0901800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:39267216:39269329:-1 gene:Os01g0901800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to acid phosphatase/vanadium-dependent haloperoxidase related. (Os01t0901800-01);Acid phosphatase/vanadium-dependent haloperoxidase related family protein. (Os01t0901800-02)
Sequence

GGGATTAGGCGAGGAGAGGGAAGGAAGGAGGGAGGGAAGGGACGCACCTTGGGGGGTGGG
AAGGAGAAGGGAGAGCCATGGGCGACGACGGTGGTGGTGATGGCGGCGCCTCCTCCGCGG
GATTCTCCTACTTCGCCGTCTTCCACAACTACCCCCTCGTCGCCGCCTTGCTGGGCTTCG
CCGTCGCGCAGTCCATCAAGTTCTTCGTCACCCGGTATAAGGAGAACAGATGGGATCCTA
AGCAGCTTATCGGTTCTGGTGGCATGCCATCGTCACATTCTGCCACAGTTACAGCACTAG
CTGTAGCGATTGGCTTCCAAGATGGTTTTGGCTGTGCCCTATTTGCGACAGCAGCAATAT
TCGCAAGTGTGGTTATGTACGATGCTTCTGGTATCAGATTACATGCTGGAAAGCAAGCAG
AGGTGTTGAATCAAATAGTCTGCGAACTTCCTTCTGAACATCCCTTGTCTGAAACAAGAC
CATTGCGTGAACTCTTAGGCCATACTCCAACCCAGGTTTGCTCAAATGCCATTTTCACTA
ATCATTTTATTATACTGCACCAATCGAAAGCGATGTCATATTGATTGTGCTGATTACGTG
GATACCAACTGAACCACAAACTGGCTGTGCCAATGTCATCAGATCCCCTTTTACCTAGCA
CCCCATGCTTATCAGTTATCGTCACATCATGCAGCTTCGTCAGCAGTGCTACCATCTTCT
TGTTTCTTTCAGTCATGGCCAACTATTTTGTATGCTATCTC