Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0901000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:39222279:39226573:-1 gene:Os01g0901000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 28, U-box protein 28 description:Similar to Arm repeat-containing protein. (Os01t0901000-01);Similar to predicted protein. (Os01t0901000-02)
Sequence	ATGGATGCAATGGAGGCCGAGGAAGGTCCTTTTCTGGCTAATGATGCTAAGTTGCATGCC GGAATGTACAGAGCATTTCATCCTGCGGTCTCAAAACTTGTAGCGATTTTCCCTTTCATT GAAGCATCAAGACCCAGAAGCAAATCTGGCATACAGGCGCTATGCTCTCTACATGTAGCT CTAGATAAAGCCAAAGGTCTTCTTCAACATTGTGCAGATTGCAGCAGGCTCTACTTGGCC ATAACTGCAGAAACTGTGCTTTTGAAATTTGAGAAAGCAAGAACCCAACTTCAGGAGAGT CTTAGACGCGTGGAGGGCATAGTAACAGAAGAAATTGGTTGTAAGATTGTAGAGATTATT GCTGAGTTGGAAGAAGTGGTATTTACATTGGATCAATCAGAGAAGGAAGCTGGTGACGAG GTGATCAATTTGCTCCAGAGAAACAGGAAAATGAATAGTTCCAGTGATAGTGGGGAGCTT GAGGTTTTTCATATGGCTGCACTAAAGCTGGGAATTACGTCTTCCAGGGCAGCACTCACT GAGAGAAGGGCCCTGAAGAAGCTAATTGAGAAGGCTCGTTCTGATGAAGATAAGCGGAAA GAGTATGTTGTGTCATACCTGTACAATCTAATGAGGAAATACTCAAAATTTTTCAGAAGT GAGGCTGGTGATGATACTGATTCTCAAGGATCGTCTCCATGCTCGCCGACAATATTAGGC ATGGAGGACATGTATGGACCCTATGGTAATGGCCGAGCATTCAGCAGACAACTTTCGAGT ATTCAATCATTCAATTCAAGGTTTGGATCTTTCAACTCTAGGCTTGGGTCATTCAATTGT AGGCGTAGTGGTCCAAGGTCCGAAAACATGTCGATCCCTCCTGAGGAGCTCCGGTGCCCT ATTTCCCTACAACTGATGTACGACCCAGTTATCATTTCATCAGGGCAAACTTATGAGCGT GTTTGCATTGAGAAATGGTTTAATGATGGTCACAGCACCTGTCCAAAGACTCAGCAGCAA TTATCTCACCTGTCTTTGACTCCAAATTACTGTGTTAAGGCCCTAATTGCCAGCTGGTGT GAGCAGAATGATTTTCCTGTTCCTGATGGTCCACCAGGATCCTTCGATGTAAATTGGAGA CTTGCTTTATCTGACTCCGAAGCGACTGGCTGCGTGTCTCTTGAAAGTTTTGACTCTATC AACGTGAAGAGTGTCAAGGTAGTTCCATTGGACAACGTGAGAAAAGAAGAGCCAGCAAAC AACGAATCGGGAACATTGGACGACAGCTCTTGTTATGATTTCGATATGAATGAGGGGTAC CGAAACTTACTGCTAATGCTTCATGAAAAAACCAACTTACACATCCAGTGCAGGTTGGTT GAGCAGATAAGATATCTTCTGAAAGATGATGAGGAAGCTAGAATCCAGATGGGCTCAAAT GGGTTTGCTGAGGCACTAGTTCAGTTCTTGAGGAACGCTGTGCAAGATGGAAATGAGAAG GCACAGGAAATTGGTGCCATGGCTCTTTTTAACCTTGCTGTCAACAATAACAGGAACAAG GGACTTTTATTGTCTGCTGGAGTAATCGATCAACTTGAGCAGATGATATCAAATCCACGC CTATCTGCTCCAGCCACGGCACTATACCTTAACCTTTCCTGCCTACCTGAGGCAAAGAAC ATCATTGGTTCGAGCCAGGCTGTGTCATTCCTAGTAGACCGTCTGTTCAGTCATGAGGCC CGCGACACAAAAGGCAGCTCTTGCAAGCATGATGCCCTATACACACTATACAATCTCTCC AACCACCAGGCCAGCGTACCGTCGCTTTTGTCTGCGGGCATTGTGGAAGCTCTTCACTCT CTCCTTTCGGAGTCCCTGGCGTCTGAGGGCCTGGGTTGGACAGAGAAGGCCCTTGCAGTG CTCATCAGCCTTGCGGCAACCCAAGCTGGCAGAAAAGATATCATGTCCACCCCAGGTCTG ATCAGCACCTTGGCGATGCTGCTGGACACCGGCGAGCCAACAGAGCAGGAGCAGTCGGTG TCCTGCCTTTTGGTGATGTGCTCAGCCGATGACAAGTGCATCGCACCGGTGCTGCAGGAA GGAGTGGTGCCTTCCTTGGTTTCCATCTCGGCAACCGGCACAGGCAAGGGGAAGGAGAAG TCCCAGAAGCTGCTCAAGCTGTTCCGGGAGCAAAGGCAGCGAGATGGGGCACAGCCTGTG CCGCAGCAAGCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGGGAGAGACC GGTAACGGCACCATGGTGTGCCGCCGCGACTCAAAACAGCTGTGCAAGTCTAAATCGAGG AAGCTAGGAAGGACTCTGAGCTCACTGTGGAAGAACAGGAGCTTCTCCCTGTACCAATGC TAG

Peptide Sequence

PEP ID	Os01t0901000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:39222279:39226573:-1 gene:Os01g0901000 transcript:Os01t0901000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 28, U-box protein 28 description:Similar to Arm repeat-containing protein. (Os01t0901000-01);Similar to predicted protein. (Os01t0901000-02)
Sequence	MDAMEAEEGPFLANDAKLHAGMYRAFHPAVSKLVAIFPFIEASRPRSKSGIQALCSLHVA LDKAKGLLQHCADCSRLYLAITAETVLLKFEKARTQLQESLRRVEGIVTEEIGCKIVEII AELEEVVFTLDQSEKEAGDEVINLLQRNRKMNSSSDSGELEVFHMAALKLGITSSRAALT ERRALKKLIEKARSDEDKRKEYVVSYLYNLMRKYSKFFRSEAGDDTDSQGSSPCSPTILG MEDMYGPYGNGRAFSRQLSSIQSFNSRFGSFNSRLGSFNCRRSGPRSENMSIPPEELRCP ISLQLMYDPVIISSGQTYERVCIEKWFNDGHSTCPKTQQQLSHLSLTPNYCVKALIASWC EQNDFPVPDGPPGSFDVNWRLALSDSEATGCVSLESFDSINVKSVKVVPLDNVRKEEPAN NESGTLDDSSCYDFDMNEGYRNLLLMLHEKTNLHIQCRLVEQIRYLLKDDEEARIQMGSN GFAEALVQFLRNAVQDGNEKAQEIGAMALFNLAVNNNRNKGLLLSAGVIDQLEQMISNPR LSAPATALYLNLSCLPEAKNIIGSSQAVSFLVDRLFSHEARDTKGSSCKHDALYTLYNLS NHQASVPSLLSAGIVEALHSLLSESLASEGLGWTEKALAVLISLAATQAGRKDIMSTPGL ISTLAMLLDTGEPTEQEQSVSCLLVMCSADDKCIAPVLQEGVVPSLVSISATGTGKGKEK SQKLLKLFREQRQRDGAQPVPQQAQQQQQQQQQQQQAGETGNGTMVCRRDSKQLCKSKSR KLGRTLSSLWKNRSFSLYQC

Transcript Sequence

Transcript ID	Os01t0901000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:39222279:39226573:-1 gene:Os01g0901000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 28, U-box protein 28 description:Similar to Arm repeat-containing protein. (Os01t0901000-01);Similar to predicted protein. (Os01t0901000-02)
Sequence	GCCACTCTCCATTCTTCCTCTCCTCCTCCCCCCGCTTCTCCTCCCCACCTCCGCCTCCGC CTCCGATCCGCCGCCGCCGTCGGCGACCGCCGGAGCCGCGTGTAGCACGCCGTCTCACCC CCGCCCCCCCCCCCCAATCGCTCTCCATTTCCCTCCCCTTTCGCTCGCTGCTGCTCCCGC ACGCCGCCGGTGCCCGGATCCCGCTGGCCGACGTCGCCCCTGCCGCCGAGCTGCCTCCTC CTCCCCTTCTCTCGCCGCTCGAAATGATGTTGGAGCTCTGGTGGTAATTAACCATGGATG CAATGGAGGCCGAGGAAGGTCCTTTTCTGGCTAATGATGCTAAGTTGCATGCCGGAATGT ACAGAGCATTTCATCCTGCGGTCTCAAAACTTGTAGCGATTTTCCCTTTCATTGAAGCAT CAAGACCCAGAAGCAAATCTGGCATACAGGCGCTATGCTCTCTACATGTAGCTCTAGATA AAGCCAAAGGTCTTCTTCAACATTGTGCAGATTGCAGCAGGCTCTACTTGGCCATAACTG CAGAAACTGTGCTTTTGAAATTTGAGAAAGCAAGAACCCAACTTCAGGAGAGTCTTAGAC GCGTGGAGGGCATAGTAACAGAAGAAATTGGTTGTAAGATTGTAGAGATTATTGCTGAGT TGGAAGAAGTGGTATTTACATTGGATCAATCAGAGAAGGAAGCTGGTGACGAGGTGATCA ATTTGCTCCAGAGAAACAGGAAAATGAATAGTTCCAGTGATAGTGGGGAGCTTGAGGTTT TTCATATGGCTGCACTAAAGCTGGGAATTACGTCTTCCAGGGCAGCACTCACTGAGAGAA GGGCCCTGAAGAAGCTAATTGAGAAGGCTCGTTCTGATGAAGATAAGCGGAAAGAGTATG TTGTGTCATACCTGTACAATCTAATGAGGAAATACTCAAAATTTTTCAGAAGTGAGGCTG GTGATGATACTGATTCTCAAGGATCGTCTCCATGCTCGCCGACAATATTAGGCATGGAGG ACATGTATGGACCCTATGGTAATGGCCGAGCATTCAGCAGACAACTTTCGAGTATTCAAT CATTCAATTCAAGGTTTGGATCTTTCAACTCTAGGCTTGGGTCATTCAATTGTAGGCGTA GTGGTCCAAGGTCCGAAAACATGTCGATCCCTCCTGAGGAGCTCCGGTGCCCTATTTCCC TACAACTGATGTACGACCCAGTTATCATTTCATCAGGGCAAACTTATGAGCGTGTTTGCA TTGAGAAATGGTTTAATGATGGTCACAGCACCTGTCCAAAGACTCAGCAGCAATTATCTC ACCTGTCTTTGACTCCAAATTACTGTGTTAAGGCCCTAATTGCCAGCTGGTGTGAGCAGA ATGATTTTCCTGTTCCTGATGGTCCACCAGGATCCTTCGATGTAAATTGGAGACTTGCTT TATCTGACTCCGAAGCGACTGGCTGCGTGTCTCTTGAAAGTTTTGACTCTATCAACGTGA AGAGTGTCAAGGTAGTTCCATTGGACAACGTGAGAAAAGAAGAGCCAGCAAACAACGAAT CGGGAACATTGGACGACAGCTCTTGTTATGATTTCGATATGAATGAGGGGTACCGAAACT TACTGCTAATGCTTCATGAAAAAACCAACTTACACATCCAGTGCAGGTTGGTTGAGCAGA TAAGATATCTTCTGAAAGATGATGAGGAAGCTAGAATCCAGATGGGCTCAAATGGGTTTG CTGAGGCACTAGTTCAGTTCTTGAGGAACGCTGTGCAAGATGGAAATGAGAAGGCACAGG AAATTGGTGCCATGGCTCTTTTTAACCTTGCTGTCAACAATAACAGGAACAAGGGACTTT TATTGTCTGCTGGAGTAATCGATCAACTTGAGCAGATGATATCAAATCCACGCCTATCTG CTCCAGCCACGGCACTATACCTTAACCTTTCCTGCCTACCTGAGGCAAAGAACATCATTG GTTCGAGCCAGGCTGTGTCATTCCTAGTAGACCGTCTGTTCAGTCATGAGGCCCGCGACA CAAAAGGCAGCTCTTGCAAGCATGATGCCCTATACACACTATACAATCTCTCCAACCACC AGGCCAGCGTACCGTCGCTTTTGTCTGCGGGCATTGTGGAAGCTCTTCACTCTCTCCTTT CGGAGTCCCTGGCGTCTGAGGGCCTGGGTTGGACAGAGAAGGCCCTTGCAGTGCTCATCA GCCTTGCGGCAACCCAAGCTGGCAGAAAAGATATCATGTCCACCCCAGGTCTGATCAGCA CCTTGGCGATGCTGCTGGACACCGGCGAGCCAACAGAGCAGGAGCAGTCGGTGTCCTGCC TTTTGGTGATGTGCTCAGCCGATGACAAGTGCATCGCACCGGTGCTGCAGGAAGGAGTGG TGCCTTCCTTGGTTTCCATCTCGGCAACCGGCACAGGCAAGGGGAAGGAGAAGTCCCAGA AGCTGCTCAAGCTGTTCCGGGAGCAAAGGCAGCGAGATGGGGCACAGCCTGTGCCGCAGC AAGCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGGGAGAGACCGGTAACG GCACCATGGTGTGCCGCCGCGACTCAAAACAGCTGTGCAAGTCTAAATCGAGGAAGCTAG GAAGGACTCTGAGCTCACTGTGGAAGAACAGGAGCTTCTCCCTGTACCAATGCTAGCAGA TTTTTGAGCTGAGTTTGATCAGTGGATATGTACATCTTTTCTTGTTCCATGTTTCTCTTG ATCTTTCTTTTTTTTTTGCCTTCTTTGTTGTTTCCTTGTGTAAAGTAAAACTATCTTCCC CCCCTTCTCGGTGGGGTGATGTAGGCCATTTCCTCTTTGTTTTTCTTTGCCAAGATATGT GCATAGCTCATCTTTCACTCTACTTAACAAGTTCAGATCAGATC