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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0898800-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:39079600:39082185:1 gene:Os01g0898800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1685 domain containing protein. (Os01t0898800-00)
Sequence

ATGGCGGCCATCTCCACCACCACCGCCGCCTACTTCTCCTCGCAGCCGCAGCTCCCCGCC
ACGGCTGCCGCCAAGTCCGGCGGGCGGCAGCAGCAGCGGCGGCGGAGCAGCTTCGTGATG
CTCGAGGCGGCGGCGGCGTCCGGGAGCGGCGGCGGAGGGGGAGGGGCGGTGGGGAGGACG
AGGAGCCTGACGGAGGAGGACCTGGAGGAGCTCAAGGGCTGCCTCGACCTCGGGTTCGGG
TTCGCCTACCACGAGATCCCCGAGCTGTGCGGGACGCTCCCGGCGCTGGAGCTCTGCTAC
TCCATGACGCGGAGGTTCCTCGACGAGCAGAGGGCGCCCGGGCAGGAGCCGGAGTCGCCC
GCCACGCCGCCGCTCCCCAACTGGAGAATCTCTGGCCCCGGTGATGACCCAAAGGAAGTG
AAGGCTAGACTGAAGTATTGGGCTCAGGCAGTGGCATGCACTGTGAAACTCTGCAGTTAG

Peptide Sequence

PEP ID

Os01t0898800-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:39079600:39082185:1 gene:Os01g0898800 transcript:Os01t0898800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1685 domain containing protein. (Os01t0898800-00)
Sequence

MAAISTTTAAYFSSQPQLPATAAAKSGGRQQQRRRSSFVMLEAAAASGSGGGGGGAVGRT
RSLTEEDLEELKGCLDLGFGFAYHEIPELCGTLPALELCYSMTRRFLDEQRAPGQEPESP
ATPPLPNWRISGPGDDPKEVKARLKYWAQAVACTVKLCS

Transcript Sequence

Transcript ID

Os01t0898800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:39079600:39082185:1 gene:Os01g0898800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1685 domain containing protein. (Os01t0898800-00)
Sequence

AAATGGCGGCCATCTCCACCACCACCGCCGCCTACTTCTCCTCGCAGCCGCAGCTCCCCG
CCACGGCTGCCGCCAAGTCCGGCGGGCGGCAGCAGCAGCGGCGGCGGAGCAGCTTCGTGA
TGCTCGAGGCGGCGGCGGCGTCCGGGAGCGGCGGCGGAGGGGGAGGGGCGGTGGGGAGGA
CGAGGAGCCTGACGGAGGAGGACCTGGAGGAGCTCAAGGGCTGCCTCGACCTCGGGTTCG
GGTTCGCCTACCACGAGATCCCCGAGCTGTGCGGGACGCTCCCGGCGCTGGAGCTCTGCT
ACTCCATGACGCGGAGGTTCCTCGACGAGCAGAGGGCGCCCGGGCAGGAGCCGGAGTCGC
CCGCCACGCCGCCGCTCCCCAACTGGAGAATCTCTGGCCCCGGTGATGACCCAAAGGAAG
TGAAGGCTAGACTGAAGTATTGGGCTCAGGCAGTGGCATGCACTGTGAAACTCTGCAGTT
AGAAATGAAGGTGGTTGAAGTTGAAGAATTTCACTTATATGGTTTTGAGGTCAGGTGAGC
AAATACACTGATGAGGTGCTTATGCCTCGTGTTATCGAGGCAACACGATCGATCAGTTAT
TTCGCAAAACTTCAAAGGGGAGACTGGTCACCCCACGGAACAGCAAGAAAACTCAAGGTG
ATCCGTGGTCCGAGCTTTTCTGAAGGCATCAGAAGCTTGTCATTCCTCATGGAGGTCTCT
GCATGGTGCAGGGTTTGCAACTGCGAGACCTGCTAGTTTTTGCTCTTGTCATGATCTTTA
GGAGCACCAATTGCTGTACT