Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0898500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:39066177:39068629:1 gene:Os01g0898500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 20, Patatin-related phospholipase A II alpha, patatin-like protein 2, patatin-like protein description:Similar to Patatin (Fragment). (Os01t0898500-01)
Sequence	ATGGAGAAGAATTGTGCATGCCCACCACCAAGCAAGGGAAACATGATCACAATTCTGAGT ATTGATGGAGGTGGGGTGAAGGGTATCATTCCTGCTGTCATCCTCTCATTCCTGGAATCT AAACTTCAGGAGCTTGATGGGAAGGATGCTCGGATTGCAAACTACTTTGATGCCATTGCT GGCACAAGCACAGGTGGTCTTATTGCAGGCATGCTAGCAGCTCCATCACTGGGCAATGCC AATCAACCATGCTATGCCAAGGATATTGTCCCATTTTACCTCAAGCATTCCCCCCACATC TTTCCGCACAGGACTGGATTTTTTGGTTGGTTCTTCAACATCCTGGGCATCATAAAGATG GCCATTGGGCCAAAGTATGATGGAAAATACCTTCACAGACTAATCAATGATCTTCTTGGC GAGACGAGGATGAAAGAAACATTGACAAATGTTGTGATTCCCACTTTTGATGTGAAGTGT GTGAAGCCAATAATATTCAGCACATTCAAGGCGAGACGTAAGCCCTTGAAGAATGCTTGT CTTGCTGATGTATGTATTGGTACATCTGCAGCACCAACCTTTCTCCCTGCACACTATTTT GAAACCGTGGATCACACGGGTGCATCGCAAAGCTTCAACATTATTGATGGTGGCATGGCA GCAAACAATCCAACTTTGGTGACTATGGGTGAGATAACAAAGCAGATCAAGCGGAAGAGC GAGGAGTTCCCGAAAGCCGAGCCCTTGGATTACCGCAAGTATCTGGTGATATCTTTGGGC ACGGGTCTGCCTGAGCACGATATCATGTTTGATGCAAGAAATGTTGCCAAATGGGGCATT TTTCGATGGCTAGTTGATAAGGATACAATGCCGTTGCTCAACATGTTCTTTCATGCCAGC TCAGATATGGCCGATACTCTCGTTGCAGACCTCTTTCAAGCAATCGGATGTTCACACCAA CTATTGCGCATTCAGGATCACAACATCCCAATAGGGGCAATATCCAATGACCTCTCGACG AAGGATCATCTTCAACTGTTGGTTAAGATAGGCGAAAACCTTCTCAAGAAGCCACTAAGC AAGGAAGAGTGTGAGAAGAACAACATTGAGCCAGAGCCAAACCTTCATGGTGACCATGTG ACGACCTATGCAGATATGCTCACACGGTTTGCAAAGCTACTTTCAGACGAGAGGAAGCTA AGGCTCCACAACATGAAGCTGGATGCTAAGCCCTAG

Peptide Sequence

PEP ID	Os01t0898500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:39066177:39068629:1 gene:Os01g0898500 transcript:Os01t0898500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 20, Patatin-related phospholipase A II alpha, patatin-like protein 2, patatin-like protein description:Similar to Patatin (Fragment). (Os01t0898500-01)
Sequence	MEKNCACPPPSKGNMITILSIDGGGVKGIIPAVILSFLESKLQELDGKDARIANYFDAIA GTSTGGLIAGMLAAPSLGNANQPCYAKDIVPFYLKHSPHIFPHRTGFFGWFFNILGIIKM AIGPKYDGKYLHRLINDLLGETRMKETLTNVVIPTFDVKCVKPIIFSTFKARRKPLKNAC LADVCIGTSAAPTFLPAHYFETVDHTGASQSFNIIDGGMAANNPTLVTMGEITKQIKRKS EEFPKAEPLDYRKYLVISLGTGLPEHDIMFDARNVAKWGIFRWLVDKDTMPLLNMFFHAS SDMADTLVADLFQAIGCSHQLLRIQDHNIPIGAISNDLSTKDHLQLLVKIGENLLKKPLS KEECEKNNIEPEPNLHGDHVTTYADMLTRFAKLLSDERKLRLHNMKLDAKP

Transcript Sequence

Transcript ID	Os01t0898500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:39066177:39068629:1 gene:Os01g0898500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 20, Patatin-related phospholipase A II alpha, patatin-like protein 2, patatin-like protein description:Similar to Patatin (Fragment). (Os01t0898500-01)
Sequence	AGAGAGAAATTTGCAAGTGATCAACAGCTGACTTGTTTGCCTCTGCCATGGAGAAGAATT GTGCATGCCCACCACCAAGCAAGGGAAACATGATCACAATTCTGAGTATTGATGGAGGTG GGGTGAAGGGTATCATTCCTGCTGTCATCCTCTCATTCCTGGAATCTAAACTTCAGGAGC TTGATGGGAAGGATGCTCGGATTGCAAACTACTTTGATGCCATTGCTGGCACAAGCACAG GTGGTCTTATTGCAGGCATGCTAGCAGCTCCATCACTGGGCAATGCCAATCAACCATGCT ATGCCAAGGATATTGTCCCATTTTACCTCAAGCATTCCCCCCACATCTTTCCGCACAGGA CTGGATTTTTTGGTTGGTTCTTCAACATCCTGGGCATCATAAAGATGGCCATTGGGCCAA AGTATGATGGAAAATACCTTCACAGACTAATCAATGATCTTCTTGGCGAGACGAGGATGA AAGAAACATTGACAAATGTTGTGATTCCCACTTTTGATGTGAAGTGTGTGAAGCCAATAA TATTCAGCACATTCAAGGCGAGACGTAAGCCCTTGAAGAATGCTTGTCTTGCTGATGTAT GTATTGGTACATCTGCAGCACCAACCTTTCTCCCTGCACACTATTTTGAAACCGTGGATC ACACGGGTGCATCGCAAAGCTTCAACATTATTGATGGTGGCATGGCAGCAAACAATCCAA CTTTGGTGACTATGGGTGAGATAACAAAGCAGATCAAGCGGAAGAGCGAGGAGTTCCCGA AAGCCGAGCCCTTGGATTACCGCAAGTATCTGGTGATATCTTTGGGCACGGGTCTGCCTG AGCACGATATCATGTTTGATGCAAGAAATGTTGCCAAATGGGGCATTTTTCGATGGCTAG TTGATAAGGATACAATGCCGTTGCTCAACATGTTCTTTCATGCCAGCTCAGATATGGCCG ATACTCTCGTTGCAGACCTCTTTCAAGCAATCGGATGTTCACACCAACTATTGCGCATTC AGGATCACAACATCCCAATAGGGGCAATATCCAATGACCTCTCGACGAAGGATCATCTTC AACTGTTGGTTAAGATAGGCGAAAACCTTCTCAAGAAGCCACTAAGCAAGGAAGAGTGTG AGAAGAACAACATTGAGCCAGAGCCAAACCTTCATGGTGACCATGTGACGACCTATGCAG ATATGCTCACACGGTTTGCAAAGCTACTTTCAGACGAGAGGAAGCTAAGGCTCCACAACA TGAAGCTGGATGCTAAGCCCTAGCACAATTGAAACGTGAGATCCTTGGAACAGATGTCTC ATGTTCATCTATAGGATTGCGTGTCCCCTACTAAGCCAATTAATTTTGTATTGTGAAATA GCTGTCTGAACTGTTAAAAATAAGAACTTTGTACAGTAGTGGTAATGTTGCTTTTATTTG CTTCAAAAAACACTAGTTGGTAAAGTTTATACTACCTATATCTGTGTGATGTGTGGTGTC TGTTCAGAATGTAGAACTATGTATTGTAATGGTGAATTTATGAAAAACGATGTATTTGCA TATATTGT