Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0897300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:38994476:38997470:-1 gene:Os01g0897300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RIBONUCLEASE 6 description:Similar to Ribonuclease 2. (Os01t0897300-01);Ribonuclease T2 family protein. (Os01t0897300-02)
Sequence

ATGGAGGAGAAGAGGCAGCGGCTGGTGATCTCTCTCTCGGCGCTCTGCCTCGCCGTCGCC
GTGATGTCCGGCGCGCTGCTGCCGCCGCGGGCGTCGGCGGCGGGAGGGGTCGGGAGGAAG
CGGCGGTGGGCCGGGTTCGACTACTACGTGCTGGCGCTGCAGTGGCCGGGCACCGTCTGC
CGCCAGACCAGCCATTGCTGCAGCTCCAATGGCTGCTGCCGCTCACATCCGCTCAAATTC
TTCACGATCCATGGGCTGTGGCCGCAGTACAGCTATGGGGGATGGCCATCCTGCTGCAGG
CCAACCACATTCGACGGCAACAAGATCTCGAGGTTGAAGACGATACTCGAGGAGTACTGG
CCGTCCTTGTACTGCGGCTCTTTCTCAACCTGCTTTGGTGGGAAAAGGCCATTTTGGGTG
CATGAGTGGGAAACTCATGGAACATGTGGTTACCCTGAAATACAGGATGAATACGACTAC
TTCTCTACAGCACTGTACCTTTACAGCAAATATAATGTGACGAAAGCTCTGAAGAAAGCA
CATATTTATCCTAGAGGAGGCAGGAAATACTTAGTTGGTCATATCGTCTCTGCTATTGAA
TTTTCCTTTGGGGCAATGCCATCTATTGTGTGTAAAAACGGCTCAGTTCAAGAACTGAGG
CTCTGCTTCCACAAGGATTATCAGCCTCGCGATTGCTTAGTTGAGGGTGAGAACTCTGTT
AGAAGAAACCATTGCCCTCGATACGTCACTTTACCATCATATAAACCACACGCATTTGGC
AATTCTACAGAAGGAATCAGTAACCAAGTCAACGTTGAGCACCAATCATATCAGTAG

Peptide Sequence

PEP ID

Os01t0897300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:38994476:38997470:-1 gene:Os01g0897300 transcript:Os01t0897300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RIBONUCLEASE 6 description:Similar to Ribonuclease 2. (Os01t0897300-01);Ribonuclease T2 family protein. (Os01t0897300-02)
Sequence

MEEKRQRLVISLSALCLAVAVMSGALLPPRASAAGGVGRKRRWAGFDYYVLALQWPGTVC
RQTSHCCSSNGCCRSHPLKFFTIHGLWPQYSYGGWPSCCRPTTFDGNKISRLKTILEEYW
PSLYCGSFSTCFGGKRPFWVHEWETHGTCGYPEIQDEYDYFSTALYLYSKYNVTKALKKA
HIYPRGGRKYLVGHIVSAIEFSFGAMPSIVCKNGSVQELRLCFHKDYQPRDCLVEGENSV
RRNHCPRYVTLPSYKPHAFGNSTEGISNQVNVEHQSYQ

Transcript Sequence

Transcript ID

Os01t0897300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:38994476:38997470:-1 gene:Os01g0897300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RIBONUCLEASE 6 description:Similar to Ribonuclease 2. (Os01t0897300-01);Ribonuclease T2 family protein. (Os01t0897300-02)
Sequence

AACTACCAGTACAAGATCCGGGTGACAAGCCAAGAAAACGCGGCCGCGCGGGAGGAGGAG
GATGGAGGAGAAGAGGCAGCGGCTGGTGATCTCTCTCTCGGCGCTCTGCCTCGCCGTCGC
CGTGATGTCCGGCGCGCTGCTGCCGCCGCGGGCGTCGGCGGCGGGAGGGGTCGGGAGGAA
GCGGCGGTGGGCCGGGTTCGACTACTACGTGCTGGCGCTGCAGTGGCCGGGCACCGTCTG
CCGCCAGACCAGCCATTGCTGCAGCTCCAATGGCTGCTGCCGCTCACATCCGCTCAAATT
CTTCACGATCCATGGGCTGTGGCCGCAGTACAGCTATGGGGGATGGCCATCCTGCTGCAG
GCCAACCACATTCGACGGCAACAAGATCTCGAGGTTGAAGACGATACTCGAGGAGTACTG
GCCGTCCTTGTACTGCGGCTCTTTCTCAACCTGCTTTGGTGGGAAAAGGCCATTTTGGGT
GCATGAGTGGGAAACTCATGGAACATGTGGTTACCCTGAAATACAGGATGAATACGACTA
CTTCTCTACAGCACTGTACCTTTACAGCAAATATAATGTGACGAAAGCTCTGAAGAAAGC
ACATATTTATCCTAGAGGAGGCAGGAAATACTTAGTTGGTCATATCGTCTCTGCTATTGA
ATTTTCCTTTGGGGCAATGCCATCTATTGTGTGTAAAAACGGCTCAGTTCAAGAACTGAG
GCTCTGCTTCCACAAGGATTATCAGCCTCGCGATTGCTTAGTTGAGGGTGAGAACTCTGT
TAGAAGAAACCATTGCCCTCGATACGTCACTTTACCATCATATAAACCACACGCATTTGG
CAATTCTACAGAAGGAATCAGTAACCAAGTCAACGTTGAGCACCAATCATATCAGTAGAT
CTCACATCTCACTGTGAGTATTCTACAATATAAACACGGCTCTGATGACTCAGGAATGAG
ATGTACAGCAAGAAACCCACTAGGCACACATACAGTAACGTCTGCATCTGTAATTCTATA
ATGCAATTCAATTGATTATAAAGCAACTGAAAATCCCATGCTGAGTTATGCAGAACTTTT
ACTGCATCTCAGTTTCTGTAAATCTGTAATTCTGAATTGTCTGCAAATTTGCAGCATCCC
GTCATTTCCAAATTCAAGCGCGCCGTTAACAATTGCC