Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0897100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:38986663:38990488:1 gene:Os01g0897100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0897100-01)
Sequence

ATGGTTCAACTCTTTTTTCAAGGGACCACAGATGGTGGTAGTGTTGATACAGATGCTGTA
AAAGCAAGGCGATCTCTTCTTGGCAAGGTGGAGCCTATAATCAGGTCGGTTATAAAGTCT
GGAGGTGGGTATGAGGCTCGGATGTGGCTCTGCAGTACGGTCTCATCCATTCATTTGCTC
GACCCATATGGCCAGCGGGACCTGTTTCTCAATCTCTTGGGGATGAAAAATTCCAAACGG
GATGTCGCTGCCCGCTTGCTGCGGATGATTTTTGACAAAAAGCCCAAAAAAGCAGGTTCT
ATTATAGCAAAGAAATGCCAGATGCTAGAGGACTTCTTCCAAGGGAATCCAAAGCAGATA
ATGCAGTGGTTTGGTCACTTTGCGGTTACTGGTGAATTGACACATAAGAAGGGTGCTAGG
GCACTTTCTCAATTTGCATTTGTGAATCGTGATATTTGTTGGGAAGAGCTTGAGTGGAAA
GGCAAGCATGGGCAGTCTCCTGCTGTTGTTGCTACTAAGCCCCATTATTTTCGTGATCTC
GATGTTCTGCGGACTGTGGAAAATTTCCTGGAGTATGTCCCAGACTTCTGGTCTTCTGAA
GAGCTTGCTGATTCCGTCAAAGACGGTGAAATACTGCAAATTGACACAGAATATTTTGTA
GATCAATTCGTTTACTTGATGTATGAGGAGAATTCCAGAGATGCATGGCAGTTAGTTGAT
GAATTTTTGATGGACGAGCAGTTTTCTTCTCTTTCTCAACATCTTCTTATTCATTTAGAT
GAACAAAGGCTTCTTAATTTCTTGAGAGCTTTGGGGAAGTTGATCAAGCTGAATTCACAG
TGCAAGGAAATGGTGTTCCCATGCTGTTGGCTTGAGGTTCTTTTGTCAGCACACAGTGAT
CACATATCTCTTGATGAACTTGTGCTATTGAACTGTGTCATTTCTAAGGGCAGACAACTT
TGGCGCCTCATGAATGATGAAGAACAAGAGGAAGAACAAGGACAGATGCAAGAGCTTCTG
AAGAGCACTAATCAATTGACTGATGCTGATCATTTTGCTCTCATGAAGGGATTTGTGGAT
ACAGAACTTCCGGACGCACTTAAGTGGATAGGCATCCAGTCCTGGCTAGTTTTCTGTGAA
TTGTCAAAAGGGTGCAAATCAGCTGATTCTTGTGAGCATCTGTTCACTTGTAACAGAATA
GAATTTCGCAAGGCTGATGATTACCCATTGGTCCAAAATGATGGGAACTCAATTGCACTA
GACAGTGATGATGAGGATCTCATAAGAGGTAGCCATAAAAGGAGAAAGAGAGATCGGAAG
AGAAAGCGACGGAGATATGATTCTGACGAGGACGATCTTGATCAGCTGCTTGAACTTGGT
ACCTCCAATAGGAGGGGCATTGAATCGCACCATGGATGTTGGTATCTTTCAACTGATGGC
TTTTCTGCTTCATGGGACATTGCAGACATACCAGATCACCTTTCCTCTCATTATCTAAAA
ACATGGCTAAAGTTTGCTTGCTTTAGATGA

Peptide Sequence

PEP ID

Os01t0897100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:38986663:38990488:1 gene:Os01g0897100 transcript:Os01t0897100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0897100-01)
Sequence

MVQLFFQGTTDGGSVDTDAVKARRSLLGKVEPIIRSVIKSGGGYEARMWLCSTVSSIHLL
DPYGQRDLFLNLLGMKNSKRDVAARLLRMIFDKKPKKAGSIIAKKCQMLEDFFQGNPKQI
MQWFGHFAVTGELTHKKGARALSQFAFVNRDICWEELEWKGKHGQSPAVVATKPHYFRDL
DVLRTVENFLEYVPDFWSSEELADSVKDGEILQIDTEYFVDQFVYLMYEENSRDAWQLVD
EFLMDEQFSSLSQHLLIHLDEQRLLNFLRALGKLIKLNSQCKEMVFPCCWLEVLLSAHSD
HISLDELVLLNCVISKGRQLWRLMNDEEQEEEQGQMQELLKSTNQLTDADHFALMKGFVD
TELPDALKWIGIQSWLVFCELSKGCKSADSCEHLFTCNRIEFRKADDYPLVQNDGNSIAL
DSDDEDLIRGSHKRRKRDRKRKRRRYDSDEDDLDQLLELGTSNRRGIESHHGCWYLSTDG
FSASWDIADIPDHLSSHYLKTWLKFACFR

Transcript Sequence

Transcript ID

Os01t0897100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:38986663:38990488:1 gene:Os01g0897100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0897100-01)
Sequence

TTTCACCGTCACCGCCTCATTCTTTCCGATCCTCCGCGCCGCGCTGCTCGGTGCTCCGCC
GCCGCCGCCGCCGCCGCCGCTCACCGCAACGAGCATACTACCGCCTCTCTTCCTCGTCGT
GCCCTAGTGGGAACTGGGAACCCCCGCCGCGCCCAGCTGGAGGTAGAAAATCTCTCTTGG
AAGATGGTTCAACTCTTTTTTCAAGGGACCACAGATGGTGGTAGTGTTGATACAGATGCT
GTAAAAGCAAGGCGATCTCTTCTTGGCAAGGTGGAGCCTATAATCAGGTCGGTTATAAAG
TCTGGAGGTGGGTATGAGGCTCGGATGTGGCTCTGCAGTACGGTCTCATCCATTCATTTG
CTCGACCCATATGGCCAGCGGGACCTGTTTCTCAATCTCTTGGGGATGAAAAATTCCAAA
CGGGATGTCGCTGCCCGCTTGCTGCGGATGATTTTTGACAAAAAGCCCAAAAAAGCAGGT
TCTATTATAGCAAAGAAATGCCAGATGCTAGAGGACTTCTTCCAAGGGAATCCAAAGCAG
ATAATGCAGTGGTTTGGTCACTTTGCGGTTACTGGTGAATTGACACATAAGAAGGGTGCT
AGGGCACTTTCTCAATTTGCATTTGTGAATCGTGATATTTGTTGGGAAGAGCTTGAGTGG
AAAGGCAAGCATGGGCAGTCTCCTGCTGTTGTTGCTACTAAGCCCCATTATTTTCGTGAT
CTCGATGTTCTGCGGACTGTGGAAAATTTCCTGGAGTATGTCCCAGACTTCTGGTCTTCT
GAAGAGCTTGCTGATTCCGTCAAAGACGGTGAAATACTGCAAATTGACACAGAATATTTT
GTAGATCAATTCGTTTACTTGATGTATGAGGAGAATTCCAGAGATGCATGGCAGTTAGTT
GATGAATTTTTGATGGACGAGCAGTTTTCTTCTCTTTCTCAACATCTTCTTATTCATTTA
GATGAACAAAGGCTTCTTAATTTCTTGAGAGCTTTGGGGAAGTTGATCAAGCTGAATTCA
CAGTGCAAGGAAATGGTGTTCCCATGCTGTTGGCTTGAGGTTCTTTTGTCAGCACACAGT
GATCACATATCTCTTGATGAACTTGTGCTATTGAACTGTGTCATTTCTAAGGGCAGACAA
CTTTGGCGCCTCATGAATGATGAAGAACAAGAGGAAGAACAAGGACAGATGCAAGAGCTT
CTGAAGAGCACTAATCAATTGACTGATGCTGATCATTTTGCTCTCATGAAGGGATTTGTG
GATACAGAACTTCCGGACGCACTTAAGTGGATAGGCATCCAGTCCTGGCTAGTTTTCTGT
GAATTGTCAAAAGGGTGCAAATCAGCTGATTCTTGTGAGCATCTGTTCACTTGTAACAGA
ATAGAATTTCGCAAGGCTGATGATTACCCATTGGTCCAAAATGATGGGAACTCAATTGCA
CTAGACAGTGATGATGAGGATCTCATAAGAGGTAGCCATAAAAGGAGAAAGAGAGATCGG
AAGAGAAAGCGACGGAGATATGATTCTGACGAGGACGATCTTGATCAGCTGCTTGAACTT
GGTACCTCCAATAGGAGGGGCATTGAATCGCACCATGGATGTTGGTATCTTTCAACTGAT
GGCTTTTCTGCTTCATGGGACATTGCAGACATACCAGATCACCTTTCCTCTCATTATCTA
AAAACATGGCTAAAGTTTGCTTGCTTTAGATGATCCTCACAACATGAGTTCAACAACCCA
CCAGTTTTCGGGTGAATTCATGGGGTCATGGAGATGTATGTACAGGCTTCGCTCTGTTTT
CCAACCTCAGATGCGCATCTTTAGGCCATGAATTCTGAGAATTCATGCATTTCTGGACGT
GCTAGCCGCTGCTACATGACCAAAGTACCGTGCTGGTTGATTCCATTGAAAAATTACAGG
CTAGGACACTGAATTGGCAGGTTTCACTGGAAAGCGGAAAGTGAAAATACATCTGAATGT
TGTAAGACTTGACTAGAGCTGTTAAAAGTTGTATGCCCCGGTCTGCGGGCCTTACCGCCT
TATGCTGTAGTTCGCAGCTGGTGACTTAAGAATTTTGATCGACCTTTTTCTACATGAAAA
TTGGTTGCTGTTTGTGCC