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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0896400-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:38959429:38960235:-1 gene:Os01g0896400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to JHL23J11.5 protein. (Os01t0896400-01)
Sequence

ATGGCGGCGGGGAAGGGGAGCCACACGCACAGGGCGTTCCTGCTCTGCAACTACGCGCTC
CTGGGGGCGGCGTCCAGCTGCATCTTCCTCACGCTCTCCCTCCGCCTCCTCCCGTCCCCG
TGCGGCCTCCTCCTCCTCTTCCTCCACGCCCTCACCGCCGTCTTCTCCGCCGCGGGCTGC
TCGGGCTCCTTCACCGCGCCCGCCACCCCCGCGCAGTGGCACAACGCCCACACCGCGGGC
GCCGCCCTCACCGCCATCTTCCAGGGCGCCGTCGCGCTGCTCGCCTTCACCCGCACCTCC
GACTTCCTCGCCGAGCTCCAGTCCTACGTCCGCGACGACGACGCCGCCGTCATCCTCAAG
ATGGTCGGCGGCCTCGGCACCGCCATCTTCGTCCTCGAGTGGGCCGCGCTCGCCCTCGCC
TTCTCCCTCCGCCTCGACGACGACGACGGCGCCGGCGACTACGACAACAAGAACTGGGCC
GCCGCCTCCTACCATGTCTGA

Peptide Sequence

PEP ID

Os01t0896400-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:38959429:38960235:-1 gene:Os01g0896400 transcript:Os01t0896400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to JHL23J11.5 protein. (Os01t0896400-01)
Sequence

MAAGKGSHTHRAFLLCNYALLGAASSCIFLTLSLRLLPSPCGLLLLFLHALTAVFSAAGC
SGSFTAPATPAQWHNAHTAGAALTAIFQGAVALLAFTRTSDFLAELQSYVRDDDAAVILK
MVGGLGTAIFVLEWAALALAFSLRLDDDDGAGDYDNKNWAAASYHV

Transcript Sequence

Transcript ID

Os01t0896400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:38959429:38960235:-1 gene:Os01g0896400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to JHL23J11.5 protein. (Os01t0896400-01)
Sequence

ACCTCCACCCACGATCTCCTCTCGCTCTCGCCATCTCGCCGCCGGCCTCCTCCACCACCA
CCGACGACTCCGACTCCGACTCCGGCTCGATCTCTCGCGGCGGCGGCGGCGATGGCGGCG
GGGAAGGGGAGCCACACGCACAGGGCGTTCCTGCTCTGCAACTACGCGCTCCTGGGGGCG
GCGTCCAGCTGCATCTTCCTCACGCTCTCCCTCCGCCTCCTCCCGTCCCCGTGCGGCCTC
CTCCTCCTCTTCCTCCACGCCCTCACCGCCGTCTTCTCCGCCGCGGGCTGCTCGGGCTCC
TTCACCGCGCCCGCCACCCCCGCGCAGTGGCACAACGCCCACACCGCGGGCGCCGCCCTC
ACCGCCATCTTCCAGGGCGCCGTCGCGCTGCTCGCCTTCACCCGCACCTCCGACTTCCTC
GCCGAGCTCCAGTCCTACGTCCGCGACGACGACGCCGCCGTCATCCTCAAGATGGTCGGC
GGCCTCGGCACCGCCATCTTCGTCCTCGAGTGGGCCGCGCTCGCCCTCGCCTTCTCCCTC
CGCCTCGACGACGACGACGGCGCCGGCGACTACGACAACAAGAACTGGGCCGCCGCCTCC
TACCATGTCTGAAACTCTGAAGCCCTCATCACCTCCTCCACTCCACTCCGCCATTGGTGC
GACCGAAGAGTCCATTCTTCGTGTGTTGTTTAGATTATTAGTAGAATTACTCTCATGATT
CTTTTGTACTAGTGATATTTTCATGTGTACTCGAATTCTTTTGTACTAAGATGCAAAGCA
AATATATATTGCTTTAAAGCGTTTGCT