Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0894500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:38891151:38893622:1 gene:Os01g0894500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sep15/SelM redox domain containing protein. (Os01t0894500-01)
Sequence

ATGGGTCGATCTGTTTACGTGGCGGCGGCCGTCGCCCTGGTGCTCACGAGCTGCTCCGTG
CTCTGCCTTGGCGCGGAGCGGTTCGGGGCGAGGGAGTGCGAGGAGCTGGGGTTCACCGGT
CTCGCCCTCTGCTCCGACTGCAACGCCCTCGCGGAGTTCGTCAAGGACCAAGAATTGGTG
GAGGACTGCCGTAAATGTTGTACAGAGGATTCAGATGATTCTATCAGCAAGCTCACATTC
TCTGGTGCAATTATTGAGGTGTGCATGAGAAAGCTTGTGTTTTATCCAGAAATCGTGGGC
TTCCTCGAAGAGGATAAAGACGACTTCCCTTATGTGGAAGCTCGTTATGTCTATGGCTCT
CCACCAAAGCTCATTATGCTTGATGACAAAGGCGACCAGAAGGAGACTATAAGGATCGAC
AACTGGAAGAGGGAGCACATTCGGCAGTTTCTCAAAGAGAAGGTGAAGCCAGTGAAGTCA
GACAGCTGA

Peptide Sequence

PEP ID

Os01t0894500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:38891151:38893622:1 gene:Os01g0894500 transcript:Os01t0894500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sep15/SelM redox domain containing protein. (Os01t0894500-01)
Sequence

MGRSVYVAAAVALVLTSCSVLCLGAERFGARECEELGFTGLALCSDCNALAEFVKDQELV
EDCRKCCTEDSDDSISKLTFSGAIIEVCMRKLVFYPEIVGFLEEDKDDFPYVEARYVYGS
PPKLIMLDDKGDQKETIRIDNWKREHIRQFLKEKVKPVKSDS

Transcript Sequence

Transcript ID

Os01t0894500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:38891151:38893622:1 gene:Os01g0894500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sep15/SelM redox domain containing protein. (Os01t0894500-01)
Sequence

AGTTTGGTAAAGAAGTGTAATATTTCTGTCGCGGAGGGGCTTTTTTGCAAAATAGGAAAG
GTAGCGGGGGGCGAAGCCGAGAAGGTCACCGCCGCTGGTCGCCGTCGTCGTCGTCGCCGC
CGCCGCCGCCGCCGTTGTGCTCGCGGGAGCTCGAAACCCCACGCTGGTCGCGCGGCGGAG
GAGGGAGGTAGGAGGGATGGGTCGATCTGTTTACGTGGCGGCGGCCGTCGCCCTGGTGCT
CACGAGCTGCTCCGTGCTCTGCCTTGGCGCGGAGCGGTTCGGGGCGAGGGAGTGCGAGGA
GCTGGGGTTCACCGGTCTCGCCCTCTGCTCCGACTGCAACGCCCTCGCGGAGTTCGTCAA
GGACCAAGAATTGGTGGAGGACTGCCGTAAATGTTGTACAGAGGATTCAGATGATTCTAT
CAGCAAGCTCACATTCTCTGGTGCAATTATTGAGGTGTGCATGAGAAAGCTTGTGTTTTA
TCCAGAAATCGTGGGCTTCCTCGAAGAGGATAAAGACGACTTCCCTTATGTGGAAGCTCG
TTATGTCTATGGCTCTCCACCAAAGCTCATTATGCTTGATGACAAAGGCGACCAGAAGGA
GACTATAAGGATCGACAACTGGAAGAGGGAGCACATTCGGCAGTTTCTCAAAGAGAAGGT
GAAGCCAGTGAAGTCAGACAGCTGAGCAACTGTCCTGAGCCAATGCAGAAGGCATTCCCA
ATGGTATTTGGTTATCTGCTAGCAAAAAAACTCGCTGTCCATGCTGATCTGTTCCTAATT
CTGAAATCTGAATAGCATATGTAGAACACCTACTGTTTCCACAAGAGAGGCTGTTGTATG
GCGTGCATTGGTATTCAGTAGTCACCCAAACATAATCAGTGTAATTCAGGATTCTTACAT
ATGCCTCCATGAGGCTATATTTTTTTTACCTC