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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0893700-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:38853527:38860214:-1 gene:Os01g0893700 gene_biotype:protein_coding transcript_biotype:protein_coding description:DOMON domain domain containing protein. (Os01t0893700-00)
Sequence

ATGGCCCGTGTCACGGCGGTCGGAGATGGGTACGAGTACGACGGGGTGGTCGTCGGCCAT
CCAGTGATCCAATTCGGCGATGGGGCGCCGCCGGCCGTCGTTGGTTACCCGCTGCCAAAG
GAGCCGCCGCCACCACCGCCGCCGGCGACATTGCAACGAGGACGCCCCGAGCAGCGGTGC
TCCTCCCGCTGCGGGCCCTGCGAGATATTCACAGTGCTGCATTGGTTTCGCTCGCTCGAC
GTCATCAATGGCGATGCGTTGCAGTTCGGGAAGGACGCGTCGTCGGCGGGAAGCAACAGC
GTGTGGAACTTCGTGCTGTCGGCGCCGGACAGCGGCGGGTACATCGCCGTCGGGTTCTCG
CCGAACGGGAAGATGGTGGGGGGCAGCGCGGTGGCCGGGTGGGCCACGCCGGGCGCCGCC
GGCACGGCGAGGCAGTACTACCTCGGCGGGACGACGTCGTCGTTGTGTCCGCCGGACCAG
GGGAAGCTGTCGCTGTCGCGCGGCGCGGCGGCGCCCACCATCGTGTCCAAGGGCTCCAGG
CTCTACCTCGCGTTCCAGCTCTCCGGCCAACCGCTCACCAACGTCATCTACGCCGTCGGC
CCCGCCGGAACCCTGCCGGGGCCCAGCGGCCTCCTCGCGCAGCACAAGGACATGGCAGCC
GGCACCATCTCCCTCTCGGGCGGCACCAGCGGCGGCGGCGGCAGCGGGACGCCCGCTACC
GGCGGCGGCGGTACGCCACAATGA

Peptide Sequence

PEP ID

Os01t0893700-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:38853527:38860214:-1 gene:Os01g0893700 transcript:Os01t0893700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:DOMON domain domain containing protein. (Os01t0893700-00)
Sequence

MARVTAVGDGYEYDGVVVGHPVIQFGDGAPPAVVGYPLPKEPPPPPPPATLQRGRPEQRC
SSRCGPCEIFTVLHWFRSLDVINGDALQFGKDASSAGSNSVWNFVLSAPDSGGYIAVGFS
PNGKMVGGSAVAGWATPGAAGTARQYYLGGTTSSLCPPDQGKLSLSRGAAAPTIVSKGSR
LYLAFQLSGQPLTNVIYAVGPAGTLPGPSGLLAQHKDMAAGTISLSGGTSGGGGSGTPAT
GGGGTPQ

Transcript Sequence

Transcript ID

Os01t0893700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:38853527:38860214:-1 gene:Os01g0893700 gene_biotype:protein_coding transcript_biotype:protein_coding description:DOMON domain domain containing protein. (Os01t0893700-00)
Sequence

ATGGCCCGTGTCACGGCGGTCGGAGATGGGTACGAGTACGACGGGGTGGTCGTCGGCCAT
CCAGTGATCCAATTCGGCGATGGGGCGCCGCCGGCCGTCGTTGGTTACCCGCTGCCAAAG
GAGCCGCCGCCACCACCGCCGCCGGCGACATTGCAACGAGGACGCCCCGAGCAGCGGTGC
TCCTCCCGCTGCGGGCCCTGCGAGATATTCACAGTGCTGCATTGGTTTCGCTCGCTCGAC
GTCATCAATGGCGATGCGTTGCAGTTCGGGAAGGACGCGTCGTCGGCGGGAAGCAACAGC
GTGTGGAACTTCGTGCTGTCGGCGCCGGACAGCGGCGGGTACATCGCCGTCGGGTTCTCG
CCGAACGGGAAGATGGTGGGGGGCAGCGCGGTGGCCGGGTGGGCCACGCCGGGCGCCGCC
GGCACGGCGAGGCAGTACTACCTCGGCGGGACGACGTCGTCGTTGTGTCCGCCGGACCAG
GGGAAGCTGTCGCTGTCGCGCGGCGCGGCGGCGCCCACCATCGTGTCCAAGGGCTCCAGG
CTCTACCTCGCGTTCCAGCTCTCCGGCCAACCGCTCACCAACGTCATCTACGCCGTCGGC
CCCGCCGGAACCCTGCCGGGGCCCAGCGGCCTCCTCGCGCAGCACAAGGACATGGCAGCC
GGCACCATCTCCCTCTCGGGCGGCACCAGCGGCGGCGGCGGCAGCGGGACGCCCGCTACC
GGCGGCGGCGGTACGCCACAATGA