Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0892500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:38807395:38810531:-1 gene:Os01g0892500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to carboxylic ester hydrolase. (Os01t0892500-01)
Sequence

ATGCCGATCCTCCCGCGTCGTCGATATGCGGAGCCCTTGCTGCTCCTGCTCCTGGCAGCC
GTTGCCCGCTCAACGGCAGCGGCACCGGACGTCGTCGAGCTGATCCTCCTCACCGGCGCT
CAGGAGAAGGGCGCAGTGTGCTTGGATGGGAGCCCACCGGGCTATCACCTGCAGAGAGGC
TTTGGCTCCGGTGAACACAGCTGGCTCATCTATCTTGAGGGAGGAGAATGGTGCGACACC
ATCGAAAGCTGTTCCAACCGTAAAACGACCGAGCTTGGTTCATCCAAATTGATGGAAGCG
CAAGAGTTCGAGGGGATACTCAGCAATAACCAAACAGTGAATTCTGATTTTTACAACTGG
AACAAAGTTGTCATAAGGTATTGCGATGGAGCATCGTTTTCAGGGAATGCGGAGGCTCAA
GATCAGGATGGGAGCACGCTCCACTTCAGAGGATTGCGCATCTGGCAAGCAGTTCTTGAT
GAGCTCATGGAAAAAGGACTTGCGAGTGCTAAACAGGCCTTACTTTCTGGATGCTCCGCT
GGTGGTCTAGCTACACTACTGCACTGCAATGATTTTCATGCACGATTTCCTAAGGAGGTT
TCAGCTAAATGCCTTCCTGATGCTGGAATTTTCCTTGATATTGAGGATTTATCTGGGAAG
AGGCTCATGTGGTCCGTTTTCAATGGAACTGTTCAGCTTCAGAATGTTAGTGAAGTTTTG
CCAAAGGATTGTCTTGCAAAGAAGGTTCGAACAGAGTGCTTCTTGGCCACTGAGCTTGTC
AAGAGCATCACCGCTCCCACGCTTATTGTGAACTCTGCCTATGATTCTTGGCAGATAAGA
GATACTCTTGCCCCAGTGGGATCCTATCCTGGACAATCATGGTTGAATTGCACAAATGAC
ATTGGAAATTGCAATTCCACACAAATGGAAGTACTCAATGGGTTCAGGAAGAAATTTGTC
GATGGCGTAAAGGTTGTCAAAGACAAAAAGGACTGGGGTCTGTTCATTGATTCATGCTTC
ATGCACTGTCAAACAAAATACAGCATCTCATGGAGCTCACAGTTTTCCCCAGTACTTGGT
AACATGACTATCGCCAAGGCTGTTGGGGATTGGTATTTTGAGAGAAGCAAAACAGTGAAA
GAGATTGACTGCGAGTATCCATGTAATCCCACATGTAAACTTACGGGATAA

Peptide Sequence

PEP ID

Os01t0892500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:38807395:38810531:-1 gene:Os01g0892500 transcript:Os01t0892500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to carboxylic ester hydrolase. (Os01t0892500-01)
Sequence

MPILPRRRYAEPLLLLLLAAVARSTAAAPDVVELILLTGAQEKGAVCLDGSPPGYHLQRG
FGSGEHSWLIYLEGGEWCDTIESCSNRKTTELGSSKLMEAQEFEGILSNNQTVNSDFYNW
NKVVIRYCDGASFSGNAEAQDQDGSTLHFRGLRIWQAVLDELMEKGLASAKQALLSGCSA
GGLATLLHCNDFHARFPKEVSAKCLPDAGIFLDIEDLSGKRLMWSVFNGTVQLQNVSEVL
PKDCLAKKVRTECFLATELVKSITAPTLIVNSAYDSWQIRDTLAPVGSYPGQSWLNCTND
IGNCNSTQMEVLNGFRKKFVDGVKVVKDKKDWGLFIDSCFMHCQTKYSISWSSQFSPVLG
NMTIAKAVGDWYFERSKTVKEIDCEYPCNPTCKLTG

Transcript Sequence

Transcript ID

Os01t0892500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:38807395:38810531:-1 gene:Os01g0892500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to carboxylic ester hydrolase. (Os01t0892500-01)
Sequence

GTCCCAGCGAGATCGACCACCCAGTCCACCACCCACCTCGTACGTGTTCTGTCCACACAC
GCGCTGCGGCTACGGGCGAGATGCCGATCCTCCCGCGTCGTCGATATGCGGAGCCCTTGC
TGCTCCTGCTCCTGGCAGCCGTTGCCCGCTCAACGGCAGCGGCACCGGACGTCGTCGAGC
TGATCCTCCTCACCGGCGCTCAGGAGAAGGGCGCAGTGTGCTTGGATGGGAGCCCACCGG
GCTATCACCTGCAGAGAGGCTTTGGCTCCGGTGAACACAGCTGGCTCATCTATCTTGAGG
GAGGAGAATGGTGCGACACCATCGAAAGCTGTTCCAACCGTAAAACGACCGAGCTTGGTT
CATCCAAATTGATGGAAGCGCAAGAGTTCGAGGGGATACTCAGCAATAACCAAACAGTGA
ATTCTGATTTTTACAACTGGAACAAAGTTGTCATAAGGTATTGCGATGGAGCATCGTTTT
CAGGGAATGCGGAGGCTCAAGATCAGGATGGGAGCACGCTCCACTTCAGAGGATTGCGCA
TCTGGCAAGCAGTTCTTGATGAGCTCATGGAAAAAGGACTTGCGAGTGCTAAACAGGCCT
TACTTTCTGGATGCTCCGCTGGTGGTCTAGCTACACTACTGCACTGCAATGATTTTCATG
CACGATTTCCTAAGGAGGTTTCAGCTAAATGCCTTCCTGATGCTGGAATTTTCCTTGATA
TTGAGGATTTATCTGGGAAGAGGCTCATGTGGTCCGTTTTCAATGGAACTGTTCAGCTTC
AGAATGTTAGTGAAGTTTTGCCAAAGGATTGTCTTGCAAAGAAGGTTCGAACAGAGTGCT
TCTTGGCCACTGAGCTTGTCAAGAGCATCACCGCTCCCACGCTTATTGTGAACTCTGCCT
ATGATTCTTGGCAGATAAGAGATACTCTTGCCCCAGTGGGATCCTATCCTGGACAATCAT
GGTTGAATTGCACAAATGACATTGGAAATTGCAATTCCACACAAATGGAAGTACTCAATG
GGTTCAGGAAGAAATTTGTCGATGGCGTAAAGGTTGTCAAAGACAAAAAGGACTGGGGTC
TGTTCATTGATTCATGCTTCATGCACTGTCAAACAAAATACAGCATCTCATGGAGCTCAC
AGTTTTCCCCAGTACTTGGTAACATGACTATCGCCAAGGCTGTTGGGGATTGGTATTTTG
AGAGAAGCAAAACAGTGAAAGAGATTGACTGCGAGTATCCATGTAATCCCACATGTAAAC
TTACGGGATAACGCTTTGATCTGGGCGTCTGACACGTCGATTTCCATCGACATCTAGTCA
TCCGGACGCGTATTTATTCCAAACATAGAGTTATTCGTTATATTGTAGTACATGAGAAGC
AAAATGTTATACTACTAACTAGAATTTGAATGTGTTTCATATTTTAAGCCG