Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0891000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:38740059:38745917:-1 gene:Os01g0891000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA39 description:Glycoside hydrolase, family 20 protein. (Os01t0891000-01)
Sequence	ATGGCGCAGGCTCTGAGTTTGGGGTTGCTTCTTGCGTTTCTGGCAATTCAATCCTGCATC GCCATTGAGCTGACTGATCACATCGACTTGTGGCCTATGCCAACGTCGGTGAGCCATGGA ACACAAAGACTTTATGTCAGCAAAGATATCACAATGTCAATGGAGGGAAGCACGTATCCT GACGGGAAAGGGATCTTGAAGGATGCCTTCCAGAGGGTAGTTGATTTAATGAAACTGAAC CATGTCGTTGATGGTGCAAACCCAAGTTCTTTTGTACTCACTGGTGTAAATGTAGTTGTC CATTCACCTGAAGATGAGCTCAAATTCGGAGTAGATGAATCATATAACTTATCTGTTCCT ACAGCAGGATATCCATTGCGCGTACAGATTGAGGCTCAAACAGTATTTGGAGCACTTCAT GCTTTACAGACATTTAGCCAACTGTGTTACTTCGATTTCACATCAAAACTTATAGAACTC ATCTCGGCTCCTTGGAGAATTTCTGACACACCAAGATTTCCTTACCGAGGACTTCTTATT GATACCTCAAGGCACTACCTTCCTGTTACGGTAATTAAAAAAGTGATTGATACAATGGCC TACAGTAAATTGAACGTTCTCCATTGGCATATTGTGGATGCACAGTCATTTCCCATTGAA ATACCTTCATACCCTAAACTGTGGAACGGTTCATATTCTTTTTCAGAGAGATATACGACG TCTGATGCTGTAGACATTGTACGATATGCTGAAAATCGAGGTGTAAATGTTATGGCTGAG ATTGATGTTCCTGGTCATGCTCTGTCATGGGGCGTTGGCTACCCATCATTGTGGCCATCA GATAGCTGCAAAGAACCACTTGATGTCAGTAACAACTTCACGTTTGGAGTTATTGATGGA ATTCTTTCAGATTTTAGCAAAGTTTTTAAATTCAAATTTGTGCATTTAGGAGGTGATGAA GTCAACACAAGCTGCTGGACTGCAACACCCCACATTAAGAAATGGTTGGATGATAACCAA ATGAATGTGTCAGATGCATACAGATATTTTGTGTTGAGATCCCAAAAGCTAGCAATATCA CACGGTTATGATGTCATCAACTGGGAGGAAACATTTAACAATTTTGGAGACAAATTGGAC CGTAGAACCGTGGTTCATAACTGGCTTGGAGAGGATGTAGCACCAAAAGTGGTTGCGGCA GGGCTGAGATGCATCGTAAGCAACCAGGATAAGTGGTACCTAGATCACTTAGATGCCACA TGGGAGGGGTTTTACACGAATGAACCTCTGAAAGGTATTGACGACCCAGAGCAGCAAAGT TTGGTCATTGGTGGTGAGGTTTGTATGTGGGGCGAACAAATTGACGCATCGGATATTGAA CAAACCATTTGGCCACGTGCTGCAGCTGCTGCAGAGAGACTATGGACTCCTATTGAGAAG ATTGCAGAAGACCCAAGATTGGTCACGTCAAGATTGGCACGCTTCAGGTGTTTGCTGAAC CAAAGAGGGGTAGCTGCTGCACCGGTGGCTGGGTATGGCCGTACAGCACCATATGAACCT GGTCCCTGTGTAAGGCAATAG

Peptide Sequence

PEP ID	Os01t0891000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:38740059:38745917:-1 gene:Os01g0891000 transcript:Os01t0891000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA39 description:Glycoside hydrolase, family 20 protein. (Os01t0891000-01)
Sequence	MAQALSLGLLLAFLAIQSCIAIELTDHIDLWPMPTSVSHGTQRLYVSKDITMSMEGSTYP DGKGILKDAFQRVVDLMKLNHVVDGANPSSFVLTGVNVVVHSPEDELKFGVDESYNLSVP TAGYPLRVQIEAQTVFGALHALQTFSQLCYFDFTSKLIELISAPWRISDTPRFPYRGLLI DTSRHYLPVTVIKKVIDTMAYSKLNVLHWHIVDAQSFPIEIPSYPKLWNGSYSFSERYTT SDAVDIVRYAENRGVNVMAEIDVPGHALSWGVGYPSLWPSDSCKEPLDVSNNFTFGVIDG ILSDFSKVFKFKFVHLGGDEVNTSCWTATPHIKKWLDDNQMNVSDAYRYFVLRSQKLAIS HGYDVINWEETFNNFGDKLDRRTVVHNWLGEDVAPKVVAAGLRCIVSNQDKWYLDHLDAT WEGFYTNEPLKGIDDPEQQSLVIGGEVCMWGEQIDASDIEQTIWPRAAAAAERLWTPIEK IAEDPRLVTSRLARFRCLLNQRGVAAAPVAGYGRTAPYEPGPCVRQ

Transcript Sequence

Transcript ID	Os01t0891000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:38740059:38745917:-1 gene:Os01g0891000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA39 description:Glycoside hydrolase, family 20 protein. (Os01t0891000-01)
Sequence	ACTACCCTCGCCATGCTTCCGGTGCTTCCTCTTCCCTCTTCCTTGTTCCAAGATAGGAAT CCAATAAGCTGTCCTGTTAGTTTTCAGTTTTTCATCCAAAAGGTGTAGATTAGGAGGTGA AAATGAAGGTGCAAGTAGAGGACTAGAGGTTCCTTCAGGTTTTCTACTTGCCTTGCGCTT GCAGATTTTGCAGAGAAGGATATCCTATCACCTTGCAAACATGGCGCAGGCTCTGAGTTT GGGGTTGCTTCTTGCGTTTCTGGCAATTCAATCCTGCATCGCCATTGAGCTGACTGATCA CATCGACTTGTGGCCTATGCCAACGTCGGTGAGCCATGGAACACAAAGACTTTATGTCAG CAAAGATATCACAATGTCAATGGAGGGAAGCACGTATCCTGACGGGAAAGGGATCTTGAA GGATGCCTTCCAGAGGGTAGTTGATTTAATGAAACTGAACCATGTCGTTGATGGTGCAAA CCCAAGTTCTTTTGTACTCACTGGTGTAAATGTAGTTGTCCATTCACCTGAAGATGAGCT CAAATTCGGAGTAGATGAATCATATAACTTATCTGTTCCTACAGCAGGATATCCATTGCG CGTACAGATTGAGGCTCAAACAGTATTTGGAGCACTTCATGCTTTACAGACATTTAGCCA ACTGTGTTACTTCGATTTCACATCAAAACTTATAGAACTCATCTCGGCTCCTTGGAGAAT TTCTGACACACCAAGATTTCCTTACCGAGGACTTCTTATTGATACCTCAAGGCACTACCT TCCTGTTACGGTAATTAAAAAAGTGATTGATACAATGGCCTACAGTAAATTGAACGTTCT CCATTGGCATATTGTGGATGCACAGTCATTTCCCATTGAAATACCTTCATACCCTAAACT GTGGAACGGTTCATATTCTTTTTCAGAGAGATATACGACGTCTGATGCTGTAGACATTGT ACGATATGCTGAAAATCGAGGTGTAAATGTTATGGCTGAGATTGATGTTCCTGGTCATGC TCTGTCATGGGGCGTTGGCTACCCATCATTGTGGCCATCAGATAGCTGCAAAGAACCACT TGATGTCAGTAACAACTTCACGTTTGGAGTTATTGATGGAATTCTTTCAGATTTTAGCAA AGTTTTTAAATTCAAATTTGTGCATTTAGGAGGTGATGAAGTCAACACAAGCTGCTGGAC TGCAACACCCCACATTAAGAAATGGTTGGATGATAACCAAATGAATGTGTCAGATGCATA CAGATATTTTGTGTTGAGATCCCAAAAGCTAGCAATATCACACGGTTATGATGTCATCAA CTGGGAGGAAACATTTAACAATTTTGGAGACAAATTGGACCGTAGAACCGTGGTTCATAA CTGGCTTGGAGAGGATGTAGCACCAAAAGTGGTTGCGGCAGGGCTGAGATGCATCGTAAG CAACCAGGATAAGTGGTACCTAGATCACTTAGATGCCACATGGGAGGGGTTTTACACGAA TGAACCTCTGAAAGGTATTGACGACCCAGAGCAGCAAAGTTTGGTCATTGGTGGTGAGGT TTGTATGTGGGGCGAACAAATTGACGCATCGGATATTGAACAAACCATTTGGCCACGTGC TGCAGCTGCTGCAGAGAGACTATGGACTCCTATTGAGAAGATTGCAGAAGACCCAAGATT GGTCACGTCAAGATTGGCACGCTTCAGGTGTTTGCTGAACCAAAGAGGGGTAGCTGCTGC ACCGGTGGCTGGGTATGGCCGTACAGCACCATATGAACCTGGTCCCTGTGTAAGGCAATA GGATATTCATAGCAAGATGAAGGTAGTATGAACAGAGGATAAACTTTGTTCAGGATTCAC TTTTACCAAGTGTAACATCAGCATCTCAATATTCAGATAGTTCAGTGGTTAGACTATTGA ATATCCTAAGTTAACCTATTATCCCTATTTTTCCCCTCTTCCAATTTTCAACAGAATAAT TTTGAGGATTC