Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0890900-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:38736349:38739981:1 gene:Os01g0890900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZMM protein OsZIP4, rice ZIP4 homolog description:Hypothetical conserved gene. (Os01t0890900-00)
Sequence	ATGTTTCGAGTTCTTCTCAAATATGCTCCAGGTATAAAAGGGGAGGATATATGCAAGCAA TTCAAATTTCGAGCTCTCCCCCCTCCCGTAATTCTTCCTCCTCTCTCCGCTCCCCTTCTC CTTCTCCCGCTTCCACGCGGCCACCCCTCGCTTTCTTCCCGCTCATCGCCATCCGATTCG AAGCTCCCGCCGCCGATGAAGATCTCCGAGCTCTCCCCCGAGTACCGGGAGCCGCCGTCG CACGCCGGCCTCATCGCCGACCTCAGCAAGGCCGTCTCCGACGTCGAGTCGTTCGCCGCC TCCGCGACGGCCCCGGAGAAGCTCGCCGCCGATCTCCGCCGCATCCTCACCAGCCTTGCC TCCGCCGCGTCCTCCTCGTCCTTCACCGAGTCGCTCTCGGTCCAGATATGGCGGCTCGGG ACCCGCCTCTGGAACGCGGTGGTCGATCGCGCCAACTCCGCCGCCCTCGCCGGGGGTCCC GCCGCGCTCGCCGTGGAGGCGGAGATCCGGCAGGCGGCGCCGGAGCTCCTGCTCCTCGCC GGGATCCCCAACGGTGTCCCCTCCGCGGCCGCGAAGGTCGCCTCCTTCTTCCACCGCTCC GGCCTGGCCTGGCTTGACCTCGGCCGCGTTGACCTCGCCTCCGCCTGCTTCGAGAAGGCC ACGCCGCTGGTCTCCGCCGCCGCAACGGAGGATCGGGGCGTCCTCCTCGAGCTCAACCTC GCGCGTGCCCGCGCGGCGTCGGACGCGGGCGATCAAGCCCTCGCCGTCGCGCTCCTGAGC CGGTCCAAGCCCCTCGCCGCCGCATCGCCGGAGGGTGCCAAATCCCTCGCCCAGGGGTAC CTCTCCATCGGCGAGGCCACGCTCGCCGCGAAGCACTCGAATCCCGCCGTCGAAGCGTCC ACTCTCTTCACCGAAGCACTAGATCTCTGCGAGAAGGCGGCCTCTCCTTCCAGCTCCAGC CCAAGGACTCCCCCTTACGGCGGCGCCACTCCTAAAACCCCAAATCTAGAGGGGCTCAAG AGGCGATGCCTCCGCTTCCTCGCTCTCGAGCGGCTCCAAGCCCAGGACTACGAAGGCGTG CTGCGTTGCATCCGGGTCTCGAGGGCATCAATGGGGCTGGAGGAGGAGCACCCGAGCATC GGGGTCATGGCGATGCGCGCGTGGATCGGAAGCGGGAACATGGCGGAGGCCGACAAGGAG CTCGAGCGGCTGATGGCCAACGCCTTAGCAACGGAGAACTTGTGCGTGTCGGCGGCAGAG GCGTACCTCGCCGCTGCGGGGCCTGAGGCTGCACGCAAGGTGCTCATTGCGCTCGCCGCG CGTTGCCGCGCCGGAGGTGCTGCTGCTGCAGTGAGGGTGGTGAAGCAGGTGATCGACGGT GGTGGCGGGGGAATTGGGCGTGCAAGGGCCATCGCCGAGCTCGTGTCGGATGAGAGGGTG GTCGCCCTGTTCGATGGCCCCGGGAACACCCATGAGCGTGGCACAATGCATGCACTGCTG TGGAACTGTGGCACAGAGCATTTCCGCGCGAAGAATTATGATACCAGTGCGGACTTGATT GAGAGATCGATGCTTTATGTGTCTCGTGATGAAGAAAGCAGATCCCGCCGTGCAGATTGC TTCCGAGTCCTTAGCATTTGCCACATTGCCCTTCAGCATCTTGATCGAGCCCTCGAGTTC GTCAATGAAGCCTACAAGGTTGAACCCAATATCAAGTGTGCTTTTCTGAAGGTTAAGATT AATCTGCAGAAGGGGGAGGAGGACGAGGCATTCAAGCAGATGAAGACGATGGTGGGCTGT GTTGACTTCAACCCTGAGTTCTTAACACTCACTGCTCATGAAGCTATGTCCTGCAAGTCT TTTGGTGTGGCAGTTGCTTCGTTGAGCTATCTTCTTGGCCTCTATTCTGCTGAGAGGCCA ATGCCAATGCCTGAGGTTGCTGTTCTGCGCAACCTTATTGAGCTCCTCTCTCGTGAGCCA GGGACTGAAGCTGAGATCCTGAAGTACTCAAGACGTGCCAAGCAACGGATGGCTGATCTT GGTGTGGAAAGCTTTTTTGGCAGTGGAATTGTTGGGGGGCGTGAACTGAATTGGTTTGCT GACCTTAGCTGGAATATGGGTTTAAGGGCGTCAAAGGAGAAGAAGTACAATTTTGGCGCT GAGTTTTTTGAGCTTGCAGCAGAGTTCTTCAGCTCACGTAATGCTGAATGTGATGAAAAT CGGTCCAAGGTTTGCAAAGCATTGATCATGGCTGTCACTATCATGCTCAATGCTGAGGAG CTAAACAATTCTCCGTTGTCAGATTCTGACATTAAAAAAGGTGTTGAGATGCTAAGCAGA GCTGGAAAGCTATTGCCCTTGATTTCACCCTCCGTTCCAGTGGCTTCTGATCAGTTGGAG GCCAACAACTTCCTGTACCTTCACACCTTCAACTCCTACCAACTCATGGGCAGGATGGGG ACCCCTGCACATCCTCAGCAGCTACAACTGATCAAGAATTTTGCTTCCTCTAAAGCATGC ACACCTGCTAATCTTCTTACACTTGGTGTAACAGCTTCTAAAGGGGCCCTACCTAACATG CTGGCTGCTGAATTTTCCCTGAAGGCCTGCATCACCACTGCCCTTGCTTCACAATCGCCA AACTACAGGGTAATCAGCTGTGCACTCAGGAAGCTAGCCTGTCTCGCTGGCTTACAAGAC CTAAATGGTAGCAAGAGTGATGCAGCCTATGATGTATTTCAACAAGCCTACCAGATTGTG GTTGGACTGAAAGAGGGTGAATACCCAGTTGAGGAAGGCCAGTGGCTTGTAGCAACCGCC TGGAACATGTCATGTTTGCCTTTACGGCTTCACCAAGCTAAAGTGGCTAGAAAATGGATG AAAATGGGGTTAGATCTGGCTCGGCATCTTGAGGGCATGAAGGAGCGTATAGCATCCATG CAGACGACCTTTGAGAACTTTGAGAGGGTGTCTGGTGATGAACCTGATGAGTGTAGTCAG GAAGAGGCACCAAAAGCCAGTATTTCTGGTAGCATGTCTCAACCTGTTCTAGTTTAG

Peptide Sequence

PEP ID	Os01t0890900-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:38736349:38739981:1 gene:Os01g0890900 transcript:Os01t0890900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZMM protein OsZIP4, rice ZIP4 homolog description:Hypothetical conserved gene. (Os01t0890900-00)
Sequence	MFRVLLKYAPGIKGEDICKQFKFRALPPPVILPPLSAPLLLLPLPRGHPSLSSRSSPSDS KLPPPMKISELSPEYREPPSHAGLIADLSKAVSDVESFAASATAPEKLAADLRRILTSLA SAASSSSFTESLSVQIWRLGTRLWNAVVDRANSAALAGGPAALAVEAEIRQAAPELLLLA GIPNGVPSAAAKVASFFHRSGLAWLDLGRVDLASACFEKATPLVSAAATEDRGVLLELNL ARARAASDAGDQALAVALLSRSKPLAAASPEGAKSLAQGYLSIGEATLAAKHSNPAVEAS TLFTEALDLCEKAASPSSSSPRTPPYGGATPKTPNLEGLKRRCLRFLALERLQAQDYEGV LRCIRVSRASMGLEEEHPSIGVMAMRAWIGSGNMAEADKELERLMANALATENLCVSAAE AYLAAAGPEAARKVLIALAARCRAGGAAAAVRVVKQVIDGGGGGIGRARAIAELVSDERV VALFDGPGNTHERGTMHALLWNCGTEHFRAKNYDTSADLIERSMLYVSRDEESRSRRADC FRVLSICHIALQHLDRALEFVNEAYKVEPNIKCAFLKVKINLQKGEEDEAFKQMKTMVGC VDFNPEFLTLTAHEAMSCKSFGVAVASLSYLLGLYSAERPMPMPEVAVLRNLIELLSREP GTEAEILKYSRRAKQRMADLGVESFFGSGIVGGRELNWFADLSWNMGLRASKEKKYNFGA EFFELAAEFFSSRNAECDENRSKVCKALIMAVTIMLNAEELNNSPLSDSDIKKGVEMLSR AGKLLPLISPSVPVASDQLEANNFLYLHTFNSYQLMGRMGTPAHPQQLQLIKNFASSKAC TPANLLTLGVTASKGALPNMLAAEFSLKACITTALASQSPNYRVISCALRKLACLAGLQD LNGSKSDAAYDVFQQAYQIVVGLKEGEYPVEEGQWLVATAWNMSCLPLRLHQAKVARKWM KMGLDLARHLEGMKERIASMQTTFENFERVSGDEPDECSQEEAPKASISGSMSQPVLV

Transcript Sequence

Transcript ID	Os01t0890900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:38736349:38739981:1 gene:Os01g0890900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZMM protein OsZIP4, rice ZIP4 homolog description:Hypothetical conserved gene. (Os01t0890900-00)
Sequence	ATGTTTCGAGTTCTTCTCAAATATGCTCCAGGTATAAAAGGGGAGGATATATGCAAGCAA TTCAAATTTCGAGCTCTCCCCCCTCCCGTAATTCTTCCTCCTCTCTCCGCTCCCCTTCTC CTTCTCCCGCTTCCACGCGGCCACCCCTCGCTTTCTTCCCGCTCATCGCCATCCGATTCG AAGCTCCCGCCGCCGATGAAGATCTCCGAGCTCTCCCCCGAGTACCGGGAGCCGCCGTCG CACGCCGGCCTCATCGCCGACCTCAGCAAGGCCGTCTCCGACGTCGAGTCGTTCGCCGCC TCCGCGACGGCCCCGGAGAAGCTCGCCGCCGATCTCCGCCGCATCCTCACCAGCCTTGCC TCCGCCGCGTCCTCCTCGTCCTTCACCGAGTCGCTCTCGGTCCAGATATGGCGGCTCGGG ACCCGCCTCTGGAACGCGGTGGTCGATCGCGCCAACTCCGCCGCCCTCGCCGGGGGTCCC GCCGCGCTCGCCGTGGAGGCGGAGATCCGGCAGGCGGCGCCGGAGCTCCTGCTCCTCGCC GGGATCCCCAACGGTGTCCCCTCCGCGGCCGCGAAGGTCGCCTCCTTCTTCCACCGCTCC GGCCTGGCCTGGCTTGACCTCGGCCGCGTTGACCTCGCCTCCGCCTGCTTCGAGAAGGCC ACGCCGCTGGTCTCCGCCGCCGCAACGGAGGATCGGGGCGTCCTCCTCGAGCTCAACCTC GCGCGTGCCCGCGCGGCGTCGGACGCGGGCGATCAAGCCCTCGCCGTCGCGCTCCTGAGC CGGTCCAAGCCCCTCGCCGCCGCATCGCCGGAGGGTGCCAAATCCCTCGCCCAGGGGTAC CTCTCCATCGGCGAGGCCACGCTCGCCGCGAAGCACTCGAATCCCGCCGTCGAAGCGTCC ACTCTCTTCACCGAAGCACTAGATCTCTGCGAGAAGGCGGCCTCTCCTTCCAGCTCCAGC CCAAGGACTCCCCCTTACGGCGGCGCCACTCCTAAAACCCCAAATCTAGAGGGGCTCAAG AGGCGATGCCTCCGCTTCCTCGCTCTCGAGCGGCTCCAAGCCCAGGACTACGAAGGCGTG CTGCGTTGCATCCGGGTCTCGAGGGCATCAATGGGGCTGGAGGAGGAGCACCCGAGCATC GGGGTCATGGCGATGCGCGCGTGGATCGGAAGCGGGAACATGGCGGAGGCCGACAAGGAG CTCGAGCGGCTGATGGCCAACGCCTTAGCAACGGAGAACTTGTGCGTGTCGGCGGCAGAG GCGTACCTCGCCGCTGCGGGGCCTGAGGCTGCACGCAAGGTGCTCATTGCGCTCGCCGCG CGTTGCCGCGCCGGAGGTGCTGCTGCTGCAGTGAGGGTGGTGAAGCAGGTGATCGACGGT GGTGGCGGGGGAATTGGGCGTGCAAGGGCCATCGCCGAGCTCGTGTCGGATGAGAGGGTG GTCGCCCTGTTCGATGGCCCCGGGAACACCCATGAGCGTGGCACAATGCATGCACTGCTG TGGAACTGTGGCACAGAGCATTTCCGCGCGAAGAATTATGATACCAGTGCGGACTTGATT GAGAGATCGATGCTTTATGTGTCTCGTGATGAAGAAAGCAGATCCCGCCGTGCAGATTGC TTCCGAGTCCTTAGCATTTGCCACATTGCCCTTCAGCATCTTGATCGAGCCCTCGAGTTC GTCAATGAAGCCTACAAGGTTGAACCCAATATCAAGTGTGCTTTTCTGAAGGTTAAGATT AATCTGCAGAAGGGGGAGGAGGACGAGGCATTCAAGCAGATGAAGACGATGGTGGGCTGT GTTGACTTCAACCCTGAGTTCTTAACACTCACTGCTCATGAAGCTATGTCCTGCAAGTCT TTTGGTGTGGCAGTTGCTTCGTTGAGCTATCTTCTTGGCCTCTATTCTGCTGAGAGGCCA ATGCCAATGCCTGAGGTTGCTGTTCTGCGCAACCTTATTGAGCTCCTCTCTCGTGAGCCA GGGACTGAAGCTGAGATCCTGAAGTACTCAAGACGTGCCAAGCAACGGATGGCTGATCTT GGTGTGGAAAGCTTTTTTGGCAGTGGAATTGTTGGGGGGCGTGAACTGAATTGGTTTGCT GACCTTAGCTGGAATATGGGTTTAAGGGCGTCAAAGGAGAAGAAGTACAATTTTGGCGCT GAGTTTTTTGAGCTTGCAGCAGAGTTCTTCAGCTCACGTAATGCTGAATGTGATGAAAAT CGGTCCAAGGTTTGCAAAGCATTGATCATGGCTGTCACTATCATGCTCAATGCTGAGGAG CTAAACAATTCTCCGTTGTCAGATTCTGACATTAAAAAAGGTGTTGAGATGCTAAGCAGA GCTGGAAAGCTATTGCCCTTGATTTCACCCTCCGTTCCAGTGGCTTCTGATCAGTTGGAG GCCAACAACTTCCTGTACCTTCACACCTTCAACTCCTACCAACTCATGGGCAGGATGGGG ACCCCTGCACATCCTCAGCAGCTACAACTGATCAAGAATTTTGCTTCCTCTAAAGCATGC ACACCTGCTAATCTTCTTACACTTGGTGTAACAGCTTCTAAAGGGGCCCTACCTAACATG CTGGCTGCTGAATTTTCCCTGAAGGCCTGCATCACCACTGCCCTTGCTTCACAATCGCCA AACTACAGGGTAATCAGCTGTGCACTCAGGAAGCTAGCCTGTCTCGCTGGCTTACAAGAC CTAAATGGTAGCAAGAGTGATGCAGCCTATGATGTATTTCAACAAGCCTACCAGATTGTG GTTGGACTGAAAGAGGGTGAATACCCAGTTGAGGAAGGCCAGTGGCTTGTAGCAACCGCC TGGAACATGTCATGTTTGCCTTTACGGCTTCACCAAGCTAAAGTGGCTAGAAAATGGATG AAAATGGGGTTAGATCTGGCTCGGCATCTTGAGGGCATGAAGGAGCGTATAGCATCCATG CAGACGACCTTTGAGAACTTTGAGAGGGTGTCTGGTGATGAACCTGATGAGTGTAGTCAG GAAGAGGCACCAAAAGCCAGTATTTCTGGTAGCATGTCTCAACCTGTTCTAGTTTAGAAA TTGGTGAAGGCACATTTCACAACTGGAGATAAATAGATCATTGAGTAATGATACACAATC AAAGTTTCTTTCATTTCAGTGTTCCAAATGACAAGTCAAATATGATCTGATGTTAGGTGC TTTCTTGTAGCTATGTGGATTCTTTGTTGACTGTGACCATGCCCTTGAATTTTATGCGTG ATCATGTGTAGGGAGATGGCAATGTTTGCAACAAAGTTAAATTTGG