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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0886500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:38517646:38520243:-1 gene:Os01g0886500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribosomal protein L37. (Os01t0886500-01)
Sequence

ATGGCGTTCGGCGGCAGGAGGGGCTCGTCGCGGTGGGGCCTCCCGGTGGTGAGGTCGGAG
GCGCTCGGCAAGCTGGGCCCCTCGTTCGGCATCGGCGCCGGCTGCGGCGTCGGCGTCTGC
TTCGGCCTCATCGGCGGTGCAGGAATTGGGGCTGGATTCCCTGGTTTGCAGTTGGGATTG
GGAGCTGGTGCTGGATGTGGGATAGGAATAGGTTTTGGCTATGGTTTTGGAAAAGGAATT
GCATATGATGAGAACGGGAGATATTCAAACATCAGGAGATCATTTCAGAATTCCAGAAAC
CTTCCTTACGATGAACAGTTTGATATCCTATTTGACGAGATGATGGAGAGCACCAGGAAG
CTGATCAAAGCGACATCAAAGGAGATCGATAAGTGGAGGCGGATGTAG

Peptide Sequence

PEP ID

Os01t0886500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:38517646:38520243:-1 gene:Os01g0886500 transcript:Os01t0886500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribosomal protein L37. (Os01t0886500-01)
Sequence

MAFGGRRGSSRWGLPVVRSEALGKLGPSFGIGAGCGVGVCFGLIGGAGIGAGFPGLQLGL
GAGAGCGIGIGFGYGFGKGIAYDENGRYSNIRRSFQNSRNLPYDEQFDILFDEMMESTRK
LIKATSKEIDKWRRM

Transcript Sequence

Transcript ID

Os01t0886500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:38517646:38520243:-1 gene:Os01g0886500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribosomal protein L37. (Os01t0886500-01)
Sequence

GGAGAATAATCTCGGAAGGGTCTCCCTCCCTCCCACCTCCTCATCCTCCTCCCCTCCTCC
GGTGAGCTCAGCTCCGGGAAGCGCTTGCGGTTGCGCGGGAAGCGCGCGGGCGAGGGAGGC
CATGGCGTTCGGCGGCAGGAGGGGCTCGTCGCGGTGGGGCCTCCCGGTGGTGAGGTCGGA
GGCGCTCGGCAAGCTGGGCCCCTCGTTCGGCATCGGCGCCGGCTGCGGCGTCGGCGTCTG
CTTCGGCCTCATCGGCGGTGCAGGAATTGGGGCTGGATTCCCTGGTTTGCAGTTGGGATT
GGGAGCTGGTGCTGGATGTGGGATAGGAATAGGTTTTGGCTATGGTTTTGGAAAAGGAAT
TGCATATGATGAGAACGGGAGATATTCAAACATCAGGAGATCATTTCAGAATTCCAGAAA
CCTTCCTTACGATGAACAGTTTGATATCCTATTTGACGAGATGATGGAGAGCACCAGGAA
GCTGATCAAAGCGACATCAAAGGAGATCGATAAGTGGAGGCGGATGTAGATGAAAACAGC
AGTACAGCACATGAATGAAGAAGAGCTTGATATCCACTAATAGCTTGAAGCAGTACAGCA
CGTGCCTAAGCGGGACTGAAATGAACCCCTTGCTTGCTTGATGTTACAGCGAATATGTTT
TCTTCTTCAGGGATTCATGAGATATTCTGTCAAATATTCTACACCATTGGAGCCCCAGAA
GTATTAATCTGCAACACCATGTGCGAGGAGATGCAACACCATGTGATTGCGACGCCATTT
CGCATTGAAATATCCCCCATGGGCGTCGCTGTCGGTATTCCGTGCTCATCTGCGGAAACG
CTATCTGTTTTCGTATTGAGAAATTTTGCAGAACTTACCTTTCAAAGGCTCAAAACACTC
TAATCCTTCCATTACGTGTGCCTTTGTTGACTAGC