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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0885900-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:38489459:38490169:1 gene:Os01g0885900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 17 description:Similar to transcriptional factor TINY. (Os01t0885900-00)
Sequence

ATGGCTGACCTCCCATGCATATATATACGCGTAGTACGTACACTTGCTTTCCCAACGCTC
GCGAATCAAATCGAGGGTGAAATTAAGTCAAGAACGGAGAGAGATCACGGTGAGGTTGAT
CTCAGCTCGCCGGAGGAGGCAATGAGCCGGGCGGAGTGCGGCGGCGGCGAGGAGGAGGAG
CGGTGCAGGTACAGGGGCGTGCGGCGGCGGCGGTGGGGGAAGTGGGTGTCGGAGATCCGG
GTGCCCGGCACGCGGGAGCGGCTGTGGCTGGGGTCCTACGCCACGCCGGAGGCCGCCGCC
GTCGCGCACGACACGGCCGTCTACTTCCTCCGCGGAGGCGCGGGCGACGGCGGTGGCGGC
GGCGCGACGCTCAACTTCCCGGAGCGCGCGGCGGCCACGTACGGCGGCGGCGCCGCCGTG
GCGCGCCTGTCGCCGCGGTCCGTGCAGCGCGTGGCGTCCGACGCCGGCATGGCCGCCGAC
GCGCAGCTCGTGGCGGCGCGGGACGCCGCGCCCGCGCCCGCGCCGGCGACGGCGTACGCG
CGCCCGGATCACTGCGCCGGCGCGACGACGGCGCGGCACGACGAGCTGGCGCGCCGCGGG
ATGTACGGCGCTCACGCGCATGCCGCCGGCGCGAACGCCAGGACGAGCGGCGAGCGGCAG
CTCGTCTGTGCCGAGGAGATTAGCGTGGATGACATGGAGATCCTGATGTAA

Peptide Sequence

PEP ID

Os01t0885900-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:38489459:38490169:1 gene:Os01g0885900 transcript:Os01t0885900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 17 description:Similar to transcriptional factor TINY. (Os01t0885900-00)
Sequence

MADLPCIYIRVVRTLAFPTLANQIEGEIKSRTERDHGEVDLSSPEEAMSRAECGGGEEEE
RCRYRGVRRRRWGKWVSEIRVPGTRERLWLGSYATPEAAAVAHDTAVYFLRGGAGDGGGG
GATLNFPERAAATYGGGAAVARLSPRSVQRVASDAGMAADAQLVAARDAAPAPAPATAYA
RPDHCAGATTARHDELARRGMYGAHAHAAGANARTSGERQLVCAEEISVDDMEILM

Transcript Sequence

Transcript ID

Os01t0885900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:38489459:38490169:1 gene:Os01g0885900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 17 description:Similar to transcriptional factor TINY. (Os01t0885900-00)
Sequence

ATGGCTGACCTCCCATGCATATATATACGCGTAGTACGTACACTTGCTTTCCCAACGCTC
GCGAATCAAATCGAGGGTGAAATTAAGTCAAGAACGGAGAGAGATCACGGTGAGGTTGAT
CTCAGCTCGCCGGAGGAGGCAATGAGCCGGGCGGAGTGCGGCGGCGGCGAGGAGGAGGAG
CGGTGCAGGTACAGGGGCGTGCGGCGGCGGCGGTGGGGGAAGTGGGTGTCGGAGATCCGG
GTGCCCGGCACGCGGGAGCGGCTGTGGCTGGGGTCCTACGCCACGCCGGAGGCCGCCGCC
GTCGCGCACGACACGGCCGTCTACTTCCTCCGCGGAGGCGCGGGCGACGGCGGTGGCGGC
GGCGCGACGCTCAACTTCCCGGAGCGCGCGGCGGCCACGTACGGCGGCGGCGCCGCCGTG
GCGCGCCTGTCGCCGCGGTCCGTGCAGCGCGTGGCGTCCGACGCCGGCATGGCCGCCGAC
GCGCAGCTCGTGGCGGCGCGGGACGCCGCGCCCGCGCCCGCGCCGGCGACGGCGTACGCG
CGCCCGGATCACTGCGCCGGCGCGACGACGGCGCGGCACGACGAGCTGGCGCGCCGCGGG
ATGTACGGCGCTCACGCGCATGCCGCCGGCGCGAACGCCAGGACGAGCGGCGAGCGGCAG
CTCGTCTGTGCCGAGGAGATTAGCGTGGATGACATGGAGATCCTGATGTAA