Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0885700-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:38481235:38484005:1 gene:Os01g0885700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase-like domain containing protein. (Os01t0885700-01)
Sequence

ATGCCAGCCATGGCGGACAATCCTCCATTGATCATGCTCCTCGCGTTCTTGTTCTCTGCT
CTTCTTCTTCTTTCTCCGGCTCATGGCGGCAGCCGCCTTCAAAGAGGTGAATCGCTCTCC
GTGGAACGCGCCTCCGACATCCTCGTGTCCTCCAATGGCGTCTTCGCGTTCGGCTTCTAC
AACCTCTCCTCCACCGTCTTCACCGTCTCCATCTGGTTCGCCGCCTCCGCCGGCCGGACC
GTCGCCTGGACGGCCAACCGCGACCGGCCGGTGCACGGCGCGGGGTCGAAGCTCACGCTG
CGGCGAGACGGCCGCCTCGTGCTCGCCGACTACGACGGCACGCCGGTGTGGCAGACCAAC
TCGAGCTCCGGCGCCGCCGCCGCCGCGGAGCTGACGGACTCCGGCAACCTCGTCGTGACA
AGCCATGGCGGGGACGTGTTGTGGCAGAGCTTCGACTACCCGACCGACACGCTGCTGCCG
GGGCAGCCGGTGACGGCGACGGCGAGGCTGTCCACGACGGACGTGCTCCACCCGACGAGC
CACTACGCGCTCCGGTTCGACGACCGCTACCTCCTCTCGCTGGCGTACGACGGCCCGGAC
ATCTCCAACATCTACTGGCCGGACCCCGACGCCAGCAGCTGGGCCAACGGCAGGATCTCC
TACAACGCCAGCCGCCGGGGCGTGCTCGACGACGCCGGCAGGTTCCTCGCCAGCGACAAC
ACCACGTTCGTCGCGTCCGACACGGGCGCCGCCGCCGGCGGCGTCACGTGGCGGCGGCTG
ACGCTGGACCACGACGGCAACCTCCGGCTGTACAGCCTGCGCGACGCCGACGGGGGGTGG
TCGGTTTCTTGGATGGCCTTCTCCCAGCCGTGCGGCATCCATGGCCTCTGCGGCTGGAAC
GGCCTCTGCGTGTACACGCCGCGGCCGGCATGCTCGTGCCCTCCAGGCTACGTTCCCGCC
GACGCCGGCGACCGCGGCAAGGGCTGCCGGCCGACGTTCAACCTCACCTGCGGCGGCGGC
GGTGGCCGGCCGGAGATGGGCTTCGCGCGGCTGCCGCAAACAGACTTCTGGGGCTCCGAC
CTCAACCTCTTCTCCTCCATCTCCGTCGACGGATGCAAGGCGGCGTGCCTCGAGCTCTGC
AACTGCGTGGCGTTCGAGTACAAGGATGACGTCAGCGACTGCTACCTCAAGTCGGCGCTC
TTCAACGGCAAGACCTACCCCGGCTACCCCGGCACGGTGTACCTCAAGCTTCCGGCGAAC
TTGGTGGCGGAGTCAGACACCTACACCGCCGCCCCGGCCGCCGCCGCCGCCGTTAATCTC
GCCTGCGACGCCGCGCGAACAGAGGAGGTTCTCCTCTCCTTCTCGGCCGCCTCCCCGGAC
ACGTCGTCGTGGCGCTACTACTACGGGTTCCTCTCGGCGTTCTTCGCCGTGGAGCTCTGC
TTCATCGCCTTCGGGTGGTGGTTCACGGCGAGGAGCCGGCCGGCGACGTCGGAGCAATGG
GCGGCGGAGGAAGGGTACAGGGTGGTCACCGACCATTTCCGGCGGTTCACCTACGGCGAG
CTCAGGAAGGCAACCAAGAACTTCAAGGACGTGATCGGTCATGGCCGGTACGGCTCCGTG
TACAGGGGCGTCCTCGCCGGCGCCGGCGACGACCGCGCCGTGGCCGTCAAGAAGCTCAAG
GCCGCGACGCCGCAGCGTGGGGACGACGAGTTCGAGACCGAGGTGAGCGTCATCGGCCGG
ATCAACCACATGAACCTGGTGAGAATCCGCGGCGTCTGCTCGGAGCGCCACCGCCGGCGG
CGGCTGCTTGTGTACGAGTACGTGGACAACGGGTCGCTCGCCACGTGGCTGTTTGGCGCC
AAGGAGACTCTCAATTGGAACCAAAGGTACAACATTGCCGTTGGTGTGGCCAAAGGTTTG
GCCTATCTCCACCATGAGTGCCTCGACTGGATCATCCACTGCGACGTTAAGCCAGAGAAC
ATACTTCTCGACGAGGATTTCGAGCCCAAGATCAGCGATTTCGGGCTCGCGAAGATGCAA
CAGAGGAGGGATCTCGATGATCCCGCCTCGTTTAGCATCAGAGGGACCAGAGGGTACATG
GCTCCGGAATGGGTTTCGAGTCTTCCGATAACCGAAAAGGTTGACGTGTACAGCTACGGT
GTCGTGCTTCTGGAGCTGGTTAGAGGGGCCAGAATGGCGGATTTGGCCACGGATAGCGTT
GGTGATGCGGAGATTGCGATGAGACAGTTGGTGTGGAAGATCAGGGAAGGGTTGAAGATT
GGTGATCGGACATGGGTAATCAGCTTGGTGGATCGTAGGTTGAATGGTAGCTTCGTTTAC
TCACAGGTGGCGTTGATGCTGGAGGTGGCTACGTCGTGTTTGGAGAAAGAAAGGAACCAA
AGACCAAGTATGAATGATGTAGTTAAGAAGTTTTACACATCAGACAAAAAGGTTGAATTC
ATTGGGGAAATGTCAAGCTAG

Peptide Sequence

PEP ID

Os01t0885700-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:38481235:38484005:1 gene:Os01g0885700 transcript:Os01t0885700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase-like domain containing protein. (Os01t0885700-01)
Sequence

MPAMADNPPLIMLLAFLFSALLLLSPAHGGSRLQRGESLSVERASDILVSSNGVFAFGFY
NLSSTVFTVSIWFAASAGRTVAWTANRDRPVHGAGSKLTLRRDGRLVLADYDGTPVWQTN
SSSGAAAAAELTDSGNLVVTSHGGDVLWQSFDYPTDTLLPGQPVTATARLSTTDVLHPTS
HYALRFDDRYLLSLAYDGPDISNIYWPDPDASSWANGRISYNASRRGVLDDAGRFLASDN
TTFVASDTGAAAGGVTWRRLTLDHDGNLRLYSLRDADGGWSVSWMAFSQPCGIHGLCGWN
GLCVYTPRPACSCPPGYVPADAGDRGKGCRPTFNLTCGGGGGRPEMGFARLPQTDFWGSD
LNLFSSISVDGCKAACLELCNCVAFEYKDDVSDCYLKSALFNGKTYPGYPGTVYLKLPAN
LVAESDTYTAAPAAAAAVNLACDAARTEEVLLSFSAASPDTSSWRYYYGFLSAFFAVELC
FIAFGWWFTARSRPATSEQWAAEEGYRVVTDHFRRFTYGELRKATKNFKDVIGHGRYGSV
YRGVLAGAGDDRAVAVKKLKAATPQRGDDEFETEVSVIGRINHMNLVRIRGVCSERHRRR
RLLVYEYVDNGSLATWLFGAKETLNWNQRYNIAVGVAKGLAYLHHECLDWIIHCDVKPEN
ILLDEDFEPKISDFGLAKMQQRRDLDDPASFSIRGTRGYMAPEWVSSLPITEKVDVYSYG
VVLLELVRGARMADLATDSVGDAEIAMRQLVWKIREGLKIGDRTWVISLVDRRLNGSFVY
SQVALMLEVATSCLEKERNQRPSMNDVVKKFYTSDKKVEFIGEMSS

Transcript Sequence

Transcript ID

Os01t0885700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:38481235:38484005:1 gene:Os01g0885700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase-like domain containing protein. (Os01t0885700-01)
Sequence

ATCCATTGTTCAATTGCCGCCGAGTTGACACAATTAACACCAAGCAATGGTCATTAGCGC
TGACACAATGACATACTCCTAATTAGTACTGCAATTTTGGGTCCTTGGGTTGTTAGAATT
CATAACTAACTGAGATGCGAGATTTCACCTTAGTTTACAGCAGCTGCAGCTATTAGCTTC
GGTGGTGCAGGATTGATGCCAGCCATGGCGGACAATCCTCCATTGATCATGCTCCTCGCG
TTCTTGTTCTCTGCTCTTCTTCTTCTTTCTCCGGCTCATGGCGGCAGCCGCCTTCAAAGA
GGTGAATCGCTCTCCGTGGAACGCGCCTCCGACATCCTCGTGTCCTCCAATGGCGTCTTC
GCGTTCGGCTTCTACAACCTCTCCTCCACCGTCTTCACCGTCTCCATCTGGTTCGCCGCC
TCCGCCGGCCGGACCGTCGCCTGGACGGCCAACCGCGACCGGCCGGTGCACGGCGCGGGG
TCGAAGCTCACGCTGCGGCGAGACGGCCGCCTCGTGCTCGCCGACTACGACGGCACGCCG
GTGTGGCAGACCAACTCGAGCTCCGGCGCCGCCGCCGCCGCGGAGCTGACGGACTCCGGC
AACCTCGTCGTGACAAGCCATGGCGGGGACGTGTTGTGGCAGAGCTTCGACTACCCGACC
GACACGCTGCTGCCGGGGCAGCCGGTGACGGCGACGGCGAGGCTGTCCACGACGGACGTG
CTCCACCCGACGAGCCACTACGCGCTCCGGTTCGACGACCGCTACCTCCTCTCGCTGGCG
TACGACGGCCCGGACATCTCCAACATCTACTGGCCGGACCCCGACGCCAGCAGCTGGGCC
AACGGCAGGATCTCCTACAACGCCAGCCGCCGGGGCGTGCTCGACGACGCCGGCAGGTTC
CTCGCCAGCGACAACACCACGTTCGTCGCGTCCGACACGGGCGCCGCCGCCGGCGGCGTC
ACGTGGCGGCGGCTGACGCTGGACCACGACGGCAACCTCCGGCTGTACAGCCTGCGCGAC
GCCGACGGGGGGTGGTCGGTTTCTTGGATGGCCTTCTCCCAGCCGTGCGGCATCCATGGC
CTCTGCGGCTGGAACGGCCTCTGCGTGTACACGCCGCGGCCGGCATGCTCGTGCCCTCCA
GGCTACGTTCCCGCCGACGCCGGCGACCGCGGCAAGGGCTGCCGGCCGACGTTCAACCTC
ACCTGCGGCGGCGGCGGTGGCCGGCCGGAGATGGGCTTCGCGCGGCTGCCGCAAACAGAC
TTCTGGGGCTCCGACCTCAACCTCTTCTCCTCCATCTCCGTCGACGGATGCAAGGCGGCG
TGCCTCGAGCTCTGCAACTGCGTGGCGTTCGAGTACAAGGATGACGTCAGCGACTGCTAC
CTCAAGTCGGCGCTCTTCAACGGCAAGACCTACCCCGGCTACCCCGGCACGGTGTACCTC
AAGCTTCCGGCGAACTTGGTGGCGGAGTCAGACACCTACACCGCCGCCCCGGCCGCCGCC
GCCGCCGTTAATCTCGCCTGCGACGCCGCGCGAACAGAGGAGGTTCTCCTCTCCTTCTCG
GCCGCCTCCCCGGACACGTCGTCGTGGCGCTACTACTACGGGTTCCTCTCGGCGTTCTTC
GCCGTGGAGCTCTGCTTCATCGCCTTCGGGTGGTGGTTCACGGCGAGGAGCCGGCCGGCG
ACGTCGGAGCAATGGGCGGCGGAGGAAGGGTACAGGGTGGTCACCGACCATTTCCGGCGG
TTCACCTACGGCGAGCTCAGGAAGGCAACCAAGAACTTCAAGGACGTGATCGGTCATGGC
CGGTACGGCTCCGTGTACAGGGGCGTCCTCGCCGGCGCCGGCGACGACCGCGCCGTGGCC
GTCAAGAAGCTCAAGGCCGCGACGCCGCAGCGTGGGGACGACGAGTTCGAGACCGAGGTG
AGCGTCATCGGCCGGATCAACCACATGAACCTGGTGAGAATCCGCGGCGTCTGCTCGGAG
CGCCACCGCCGGCGGCGGCTGCTTGTGTACGAGTACGTGGACAACGGGTCGCTCGCCACG
TGGCTGTTTGGCGCCAAGGAGACTCTCAATTGGAACCAAAGGTACAACATTGCCGTTGGT
GTGGCCAAAGGTTTGGCCTATCTCCACCATGAGTGCCTCGACTGGATCATCCACTGCGAC
GTTAAGCCAGAGAACATACTTCTCGACGAGGATTTCGAGCCCAAGATCAGCGATTTCGGG
CTCGCGAAGATGCAACAGAGGAGGGATCTCGATGATCCCGCCTCGTTTAGCATCAGAGGG
ACCAGAGGGTACATGGCTCCGGAATGGGTTTCGAGTCTTCCGATAACCGAAAAGGTTGAC
GTGTACAGCTACGGTGTCGTGCTTCTGGAGCTGGTTAGAGGGGCCAGAATGGCGGATTTG
GCCACGGATAGCGTTGGTGATGCGGAGATTGCGATGAGACAGTTGGTGTGGAAGATCAGG
GAAGGGTTGAAGATTGGTGATCGGACATGGGTAATCAGCTTGGTGGATCGTAGGTTGAAT
GGTAGCTTCGTTTACTCACAGGTGGCGTTGATGCTGGAGGTGGCTACGTCGTGTTTGGAG
AAAGAAAGGAACCAAAGACCAAGTATGAATGATGTAGTTAAGAAGTTTTACACATCAGAC
AAAAAGGTTGAATTCATTGGGGAAATGTCAAGCTAGCAAGCAATCTGATGGCAATGTTGT
AGTTGTAAACCTCCTGTACAAACTTCAACTATAGTGAAAAGGAGTTCTTTTTTGATACTC
TTTGTGCTAGT