Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0885200-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:38448294:38449287:-1 gene:Os01g0885200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised conserved protein UCP031277 domain containing protein. (Os01t0885200-01);Hypothetical conserved gene. (Os01t0885200-02)
Sequence

CTAGGGTTTGCGGAGCCAAGCATCTTCTTTGCGTTTGCTTTCCTTCTTCACGGCTCGTTA
CAGAAGAGGGAGTTGGGCACTTTGAACCAAAGATGGAATTGGAAGACCATAGGCTACATG
TTGGTTTTCTGCGTTCCGGTGTTCTTCGTGCAGGCTCTTCTCGTGTTTGTTGGGCCAACA
TTTGTTAAGGATGAGAACAATACACATGGAAGGAAAAAGATTGCTAAATACTTCATCCGG
ACATCCATGCCAGTTGGGGACACAAATATTTGCACCTATCCATTGTTTGGCACCATTTTC
CTGGGACTTATAGACGCCATCCTGATGAGCTATGTCTCCTATGTTGGATCTCGGGTTTTG
TCCTTGGTCATCAACAAGGCACTGCGAAGGAGGGTTTCCTTGCTGATGTTATCGGTGCTT
TTCTTCCTTCCTATCAGGGTGCTTCTACTTGGGTTTTCTGTCCTGCCCCAACCAGGAGAT
GTAGCATTTGAAGTGATCATCTTCTTGTCATTCTTGATGATGATATCCTGCACAACCGTT
GGTGTTCTCTTGCTGGTGTACTATCCTGTAGCAGATTCATTGGCTCTCCGAGAGATAGGT
CAGAGGGAAATAACAGAGATGGTTCCTTATGATGATTACTACTATGAAGGTGCATCGCTT
GTAGCCAACCAGAGCTTTCGAGAAATTGAACGGAACTCAGATACTTCAACGAAGCGTGGT
TCCATATCTTTCCGCACTATGATCAGGGAAGACCAACTTCAGCAGGATGGTGTTGATGAA
ATTGGATTCTCCTCTCGTAGTGGTGCTCATATTGGATCACCCTCACCTTCAGGTTCATCC
CCAAGTGCTGCAATGCCCATGCTCCCTCTCAAGGAAGTACCTAGATACTAA

Peptide Sequence

PEP ID

Os01t0885200-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:38448294:38449287:-1 gene:Os01g0885200 transcript:Os01t0885200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised conserved protein UCP031277 domain containing protein. (Os01t0885200-01);Hypothetical conserved gene. (Os01t0885200-02)
Sequence

LGFAEPSIFFAFAFLLHGSLQKRELGTLNQRWNWKTIGYMLVFCVPVFFVQALLVFVGPT
FVKDENNTHGRKKIAKYFIRTSMPVGDTNICTYPLFGTIFLGLIDAILMSYVSYVGSRVL
SLVINKALRRRVSLLMLSVLFFLPIRVLLLGFSVLPQPGDVAFEVIIFLSFLMMISCTTV
GVLLLVYYPVADSLALREIGQREITEMVPYDDYYYEGASLVANQSFREIERNSDTSTKRG
SISFRTMIREDQLQQDGVDEIGFSSRSGAHIGSPSPSGSSPSAAMPMLPLKEVPRY

Transcript Sequence

Transcript ID

Os01t0885200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:38448294:38449287:-1 gene:Os01g0885200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised conserved protein UCP031277 domain containing protein. (Os01t0885200-01);Hypothetical conserved gene. (Os01t0885200-02)
Sequence

ATCTAGGGTTTGCGGAGCCAAGCATCTTCTTTGCGTTTGCTTTCCTTCTTCACGGCTCGT
TACAGAAGAGGGAGTTGGGCACTTTGAACCAAAGATGGAATTGGAAGACCATAGGCTACA
TGTTGGTTTTCTGCGTTCCGGTGTTCTTCGTGCAGGCTCTTCTCGTGTTTGTTGGGCCAA
CATTTGTTAAGGATGAGAACAATACACATGGAAGGAAAAAGATTGCTAAATACTTCATCC
GGACATCCATGCCAGTTGGGGACACAAATATTTGCACCTATCCATTGTTTGGCACCATTT
TCCTGGGACTTATAGACGCCATCCTGATGAGCTATGTCTCCTATGTTGGATCTCGGGTTT
TGTCCTTGGTCATCAACAAGGCACTGCGAAGGAGGGTTTCCTTGCTGATGTTATCGGTGC
TTTTCTTCCTTCCTATCAGGGTGCTTCTACTTGGGTTTTCTGTCCTGCCCCAACCAGGAG
ATGTAGCATTTGAAGTGATCATCTTCTTGTCATTCTTGATGATGATATCCTGCACAACCG
TTGGTGTTCTCTTGCTGGTGTACTATCCTGTAGCAGATTCATTGGCTCTCCGAGAGATAG
GTCAGAGGGAAATAACAGAGATGGTTCCTTATGATGATTACTACTATGAAGGTGCATCGC
TTGTAGCCAACCAGAGCTTTCGAGAAATTGAACGGAACTCAGATACTTCAACGAAGCGTG
GTTCCATATCTTTCCGCACTATGATCAGGGAAGACCAACTTCAGCAGGATGGTGTTGATG
AAATTGGATTCTCCTCTCGTAGTGGTGCTCATATTGGATCACCCTCACCTTCAGGTTCAT
CCCCAAGTGCTGCAATGCCCATGCTCCCTCTCAAGGAAGTACCTAGATACTAAGAAGTAT
TCACCTGTTCCTTTTGCCCTTCTACTATGTTCTCCCTTTTCTTCTTCCTCTTTCTTCCTC
TTACTACCTTAATGATAACAGTTTTGTGGCAATC