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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0885000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:38443627:38446419:1 gene:Os01g0885000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome c. (Os01t0885000-01);Similar to Cytochrome c. (Os01t0885000-02)
Sequence

ATGGCGACATTCTCCGATGCGCCGCCCGGGGACGCGGCGGCCGGCGAGAAGATCTTCAGG
ACCAAGTGCGCGTACTGCCATGCCGTCGACAAGGCCGCCGGCCACAAGCATGGGCCAAAC
TTGAACGGTTTGTTTGGGAGGCAATCTGGTACAGCTCCTGGTTTCTCTTACCCATCTGGC
GACAAGATAGTGCCTGTGATTTGGGAAGAGAACACTTTGTATGACTACCTGCTTACTCCT
AAGAAGTACACTCCTGCCAAGATGGGGTTCAATGGACTGAAGCAGCCACAGGACCGTGCT
GATCTCATCGCATACCTGAAGAACGCCACAGCATGA

Peptide Sequence

PEP ID

Os01t0885000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:38443627:38446419:1 gene:Os01g0885000 transcript:Os01t0885000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome c. (Os01t0885000-01);Similar to Cytochrome c. (Os01t0885000-02)
Sequence

MATFSDAPPGDAAAGEKIFRTKCAYCHAVDKAAGHKHGPNLNGLFGRQSGTAPGFSYPSG
DKIVPVIWEENTLYDYLLTPKKYTPAKMGFNGLKQPQDRADLIAYLKNATA

Transcript Sequence

Transcript ID

Os01t0885000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:38443627:38446419:1 gene:Os01g0885000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome c. (Os01t0885000-01);Similar to Cytochrome c. (Os01t0885000-02)
Sequence

GTCGTCCATCCCCTCTCCATCAGTCATTCCAAGGTCAACCCAAACCCTACCTGGTCCGCG
AGTGCGGTGGCGATGGCGACATTCTCCGATGCGCCGCCCGGGGACGCGGCGGCCGGCGAG
AAGATCTTCAGGACCAAGTGCGCGTACTGCCATGCCGTCGACAAGGCCGCCGGCCACAAG
CATGGGCCAAACTTGAACGGTTTGTTTGGGAGGCAATCTGGTACAGCTCCTGGTTTCTCT
TACCCATCTGGCGACAAGATAGTGCCTGTGATTTGGGAAGAGAACACTTTGTATGACTAC
CTGCTTACTCCTAAGAAGTACACTCCTGCCAAGATGGGGTTCAATGGACTGAAGCAGCCA
CAGGACCGTGCTGATCTCATCGCATACCTGAAGAACGCCACAGCATGAGAGTCCCTGCTG
CCATCTTCCTAAGATGAAGAGAAGCTTATTGCTCGTAGCCTCATACTGACTCTTTGTAAC
TTGTAAGGTGAACTTTGCAACAAAACTGTGTTGTAAATTTGTAATAATAAGCAGTGGCCT
CGTGGAAGAGACGATGTGCAGCTCATCCACTTGGGCAGCTGCGAGCTATTCTTTGGCTGT
GTTCTTTGACGTGGGTTGGGAACTAATCCCATGCATAAACAGAGCGACAGATAAATATAT
TTTTTAAATAAGATAAATGATCAAACAGTATAAGC