Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0884400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:38409242:38413057:1 gene:Os01g0884400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 16, U-box protein 16 description:Armadillo domain containing protein. (Os01t0884400-01)
Sequence	TCTTCGTCTCCGCCTCCTGCGACGAAGCGAAGCGAGACGCCTCCGCCTCGCGCGAGCCAC CACGAGCACCTCGACACGGGAGTCCGAATCCTCCTCCTCCCCCCTCCATTGGAGGCCTCC GAGGTGATGGATTCAGTGTCATTGTCACTACTCGATAGTATTTCAAATTTCCGGGTGCTG TCTTCAAGCAATGCCTCGAAAACAGAGCTAGTTAAGAAATATTGCCAAACGATGGATGGC ATCCTTGATCACTTGGAGGTGGCCCTAAACAGAGCTTTTCCTCAGATTACTCCAGATGGT GAACTAAGTAAAGTGCTTGAAGAACTTGGCGCTACCATCAATGAAGCGACTGAGCTAGTT GGAGGCTGGAATCAAATGATGAGCAAGATTTATTTTGTTATTCAGGCTGATTCAATTATT GCCAAGATGCAGATATATGTATTCGAATTATGCCAAATTGTCAATTCTCTCATGCAGATT GAGTCAATGCATTTGGAGGATCTTGAACACGATAGCTGTGGAAAAATTTCAGATGTCATT AGGGAGGCTTCCAGGGCTTTAGCAGGGGAAGTTATGCCAAATTCAGAGGAATTTGGAAAG ATTCAAACTACTTTGAGCTTATCCACAAATCAGGAGTTGCTGATGGAATATGTTGCACTT GTTAAGGTTAAAACAAAAGGTAATCATGAAGATAACAAAGAAATGGATGATATTAACGAT ATTGTTGAATTAGTCAACCATATGCTTGACAAACATGTGGAAGAAAAGCAAACACGTAGC ATTAATGGAGTGACCATTCCTGCTGATTTTTGTTGTCCTCTTTCCCTTGAACTAATGTCG GATCCAGTGATTGTGGCATCTGGTCAAACGTATGAGCATGTTTTTATCAGAAAATGGTTT GATCTGGGATACAACATTTGTCCAAAGACACGCCAAATATTGGGACACACCAAATTGATT CCTAACTTCACTGTCAAACAGTTGATTGAAAATTGGTGTGAGGTACATGGTATAATGCTA CCAGATCCTGTTAAACTCTTGAGTTTGTGCTTCCCTGTTTCCCTCAACATCACAGATGGA AGTGCAAGTGCAGACAAGTCTGGATCACCAGAACACTGCCAATTGGTAGCTGCATTGCAT CCAAAAGCACAGTGCGCATCGGATGATAGTCATCATTATAATTTGATACATGAAAACTCT GATTCAGATGATAGAGTGTCATCATTTGGAGACACAGATGATTCTGAACCTGATTCTTTA AGATTATCAACAGAAACTACTGCAGCAAACAAATCTCTACTTGATGAAAAAACTGATCGT TCTGATGGTCTTAAGCAATTGAGAGACAATGGTTTTCAAGTTTCTGATGAGGAACAGTAT CTCGAAAGGAATGGTAAAAGTCATATCAGCAGCCATCATCAACTTGAAGTTGATGGAGAG AATGTCAGGGTACAAGCATCAAGTGACATCAATGCATCTGAAGTTATGCAAGATGATCCG GTCACCACATGTTCAAAGGTATCAGATAACCCTCCTAGATTGGGTGGTGTTCGTTCTCGA AATCAGCCAAACTGGTGGAGACAGTCTAATAAAACTATTCCTAGGATCGGATTGTCATCT TCGACAGATTCAAAACCAGATTTTTCTGGCAATGATGCTAAAGTGCGTAATCTTATCGAG GAACTGAAAAGTGATTCTGCTGAGGTCCAAAGGTCAGCAACAGGAGAGCTCCGCATTCTT TCTAGACACAGCTTGGAGAATAGAATTGCCATCGCAAACTGCGGAGCAATCCCCTTCTTG GTGAGTCTACTTCATTCTACAGACCCCAGCACACAAGAAAATGCTGTGACAATTCTCCTG AATTTGTCATTGGATGACAATAACAAGATTGCCATAGCAAGTGCTGAGGCCATTGAGCCT CTCATCTTCGTTCTTCAGGTGGGAAACCCCGAAGCGAAAGCCAACTCAGCTGCAACTTTA TTCAGCCTCTCAGTCATTGAAGAGAACAAGATCAAGATTGGACGTTCCGGTGCCATCGAA CCATTAGTAGATTTACTGGGAGAAGGTACCCCGCAAGGGAAGAAGGATGCAGCTACTGCA CTCTTCAATCTGTCGATATTTCATGAACACAAGACCCGCATTGTTCAGGCTGGGGCTGTC AACCACCTGGTGGAGCTGATGGATCCAGCTGCTGGGATGGTTGATAAAGCTGTTGCTGTT CTGGCAAACCTTGCGACTGTGCATGATGGAAGGAATGCCATTGCTCAGGCAGGAGGCATC CGAGTACTGGTTGAGGTTGTTGAGCTGGGTTCTGCACGTTCAAAGGAGAATGCCGCTGCT GCCCTGCTACAACTCTGCACAAACAGTAACAGGTTTTGCACCCTGGTTCTTCAAGAAGGC GTCGTGCCACCTTTGGTTGCATTGTCGCAATCAGGCACAGCCCGTGCAAGAGAGAAGGCT CAGGTTCTTCTAAGCTATTTTCGCAACCAGCGCCACGTCAGGGTTGGGAGAGGGTAA

Peptide Sequence

PEP ID	Os01t0884400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:38409242:38413057:1 gene:Os01g0884400 transcript:Os01t0884400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 16, U-box protein 16 description:Armadillo domain containing protein. (Os01t0884400-01)
Sequence	SSSPPPATKRSETPPPRASHHEHLDTGVRILLLPPPLEASEVMDSVSLSLLDSISNFRVL SSSNASKTELVKKYCQTMDGILDHLEVALNRAFPQITPDGELSKVLEELGATINEATELV GGWNQMMSKIYFVIQADSIIAKMQIYVFELCQIVNSLMQIESMHLEDLEHDSCGKISDVI REASRALAGEVMPNSEEFGKIQTTLSLSTNQELLMEYVALVKVKTKGNHEDNKEMDDIND IVELVNHMLDKHVEEKQTRSINGVTIPADFCCPLSLELMSDPVIVASGQTYEHVFIRKWF DLGYNICPKTRQILGHTKLIPNFTVKQLIENWCEVHGIMLPDPVKLLSLCFPVSLNITDG SASADKSGSPEHCQLVAALHPKAQCASDDSHHYNLIHENSDSDDRVSSFGDTDDSEPDSL RLSTETTAANKSLLDEKTDRSDGLKQLRDNGFQVSDEEQYLERNGKSHISSHHQLEVDGE NVRVQASSDINASEVMQDDPVTTCSKVSDNPPRLGGVRSRNQPNWWRQSNKTIPRIGLSS STDSKPDFSGNDAKVRNLIEELKSDSAEVQRSATGELRILSRHSLENRIAIANCGAIPFL VSLLHSTDPSTQENAVTILLNLSLDDNNKIAIASAEAIEPLIFVLQVGNPEAKANSAATL FSLSVIEENKIKIGRSGAIEPLVDLLGEGTPQGKKDAATALFNLSIFHEHKTRIVQAGAV NHLVELMDPAAGMVDKAVAVLANLATVHDGRNAIAQAGGIRVLVEVVELGSARSKENAAA ALLQLCTNSNRFCTLVLQEGVVPPLVALSQSGTARAREKAQVLLSYFRNQRHVRVGRG

Transcript Sequence

Transcript ID	Os01t0884400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:38409242:38413057:1 gene:Os01g0884400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 16, U-box protein 16 description:Armadillo domain containing protein. (Os01t0884400-01)
Sequence	GTCTTCGTCTCCGCCTCCTGCGACGAAGCGAAGCGAGACGCCTCCGCCTCGCGCGAGCCA CCACGAGCACCTCGACACGGGAGTCCGAATCCTCCTCCTCCCCCCTCCATTGGAGGCCTC CGAGGTGATGGATTCAGTGTCATTGTCACTACTCGATAGTATTTCAAATTTCCGGGTGCT GTCTTCAAGCAATGCCTCGAAAACAGAGCTAGTTAAGAAATATTGCCAAACGATGGATGG CATCCTTGATCACTTGGAGGTGGCCCTAAACAGAGCTTTTCCTCAGATTACTCCAGATGG TGAACTAAGTAAAGTGCTTGAAGAACTTGGCGCTACCATCAATGAAGCGACTGAGCTAGT TGGAGGCTGGAATCAAATGATGAGCAAGATTTATTTTGTTATTCAGGCTGATTCAATTAT TGCCAAGATGCAGATATATGTATTCGAATTATGCCAAATTGTCAATTCTCTCATGCAGAT TGAGTCAATGCATTTGGAGGATCTTGAACACGATAGCTGTGGAAAAATTTCAGATGTCAT TAGGGAGGCTTCCAGGGCTTTAGCAGGGGAAGTTATGCCAAATTCAGAGGAATTTGGAAA GATTCAAACTACTTTGAGCTTATCCACAAATCAGGAGTTGCTGATGGAATATGTTGCACT TGTTAAGGTTAAAACAAAAGGTAATCATGAAGATAACAAAGAAATGGATGATATTAACGA TATTGTTGAATTAGTCAACCATATGCTTGACAAACATGTGGAAGAAAAGCAAACACGTAG CATTAATGGAGTGACCATTCCTGCTGATTTTTGTTGTCCTCTTTCCCTTGAACTAATGTC GGATCCAGTGATTGTGGCATCTGGTCAAACGTATGAGCATGTTTTTATCAGAAAATGGTT TGATCTGGGATACAACATTTGTCCAAAGACACGCCAAATATTGGGACACACCAAATTGAT TCCTAACTTCACTGTCAAACAGTTGATTGAAAATTGGTGTGAGGTACATGGTATAATGCT ACCAGATCCTGTTAAACTCTTGAGTTTGTGCTTCCCTGTTTCCCTCAACATCACAGATGG AAGTGCAAGTGCAGACAAGTCTGGATCACCAGAACACTGCCAATTGGTAGCTGCATTGCA TCCAAAAGCACAGTGCGCATCGGATGATAGTCATCATTATAATTTGATACATGAAAACTC TGATTCAGATGATAGAGTGTCATCATTTGGAGACACAGATGATTCTGAACCTGATTCTTT AAGATTATCAACAGAAACTACTGCAGCAAACAAATCTCTACTTGATGAAAAAACTGATCG TTCTGATGGTCTTAAGCAATTGAGAGACAATGGTTTTCAAGTTTCTGATGAGGAACAGTA TCTCGAAAGGAATGGTAAAAGTCATATCAGCAGCCATCATCAACTTGAAGTTGATGGAGA GAATGTCAGGGTACAAGCATCAAGTGACATCAATGCATCTGAAGTTATGCAAGATGATCC GGTCACCACATGTTCAAAGGTATCAGATAACCCTCCTAGATTGGGTGGTGTTCGTTCTCG AAATCAGCCAAACTGGTGGAGACAGTCTAATAAAACTATTCCTAGGATCGGATTGTCATC TTCGACAGATTCAAAACCAGATTTTTCTGGCAATGATGCTAAAGTGCGTAATCTTATCGA GGAACTGAAAAGTGATTCTGCTGAGGTCCAAAGGTCAGCAACAGGAGAGCTCCGCATTCT TTCTAGACACAGCTTGGAGAATAGAATTGCCATCGCAAACTGCGGAGCAATCCCCTTCTT GGTGAGTCTACTTCATTCTACAGACCCCAGCACACAAGAAAATGCTGTGACAATTCTCCT GAATTTGTCATTGGATGACAATAACAAGATTGCCATAGCAAGTGCTGAGGCCATTGAGCC TCTCATCTTCGTTCTTCAGGTGGGAAACCCCGAAGCGAAAGCCAACTCAGCTGCAACTTT ATTCAGCCTCTCAGTCATTGAAGAGAACAAGATCAAGATTGGACGTTCCGGTGCCATCGA ACCATTAGTAGATTTACTGGGAGAAGGTACCCCGCAAGGGAAGAAGGATGCAGCTACTGC ACTCTTCAATCTGTCGATATTTCATGAACACAAGACCCGCATTGTTCAGGCTGGGGCTGT CAACCACCTGGTGGAGCTGATGGATCCAGCTGCTGGGATGGTTGATAAAGCTGTTGCTGT TCTGGCAAACCTTGCGACTGTGCATGATGGAAGGAATGCCATTGCTCAGGCAGGAGGCAT CCGAGTACTGGTTGAGGTTGTTGAGCTGGGTTCTGCACGTTCAAAGGAGAATGCCGCTGC TGCCCTGCTACAACTCTGCACAAACAGTAACAGGTTTTGCACCCTGGTTCTTCAAGAAGG CGTCGTGCCACCTTTGGTTGCATTGTCGCAATCAGGCACAGCCCGTGCAAGAGAGAAGGC TCAGGTTCTTCTAAGCTATTTTCGCAACCAGCGCCACGTCAGGGTTGGGAGAGGGTAAGT CTACGCAATTAAGCAGCAATGCGGCGGTCTGATTATTGTTCCATGATCCTTGTTGGCCGG GCAATTAAGAGATGTATATTCCATCCTAGTCGTAGCATATTTTTTCTGGTAGTGATTCCA AATGATTGATGTCACAAGTTGCTTCCTGTAAAGAAGACCCATCTATTGTGTATACATGGT TTTCACGATATTTAGTTCACTTCTG