Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0882500-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:38306570:38307754:-1 gene:Os01g0882500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NADH dehydrogenase I subunit N. (Os01t0882500-00)
Sequence

ATGTGGTCGGCGGCGGCGGCGCGCACGGTGACCCCGCTGCCGGCGGCGTCGCCCCTGCAG
CAGCATCAGCAGCGGCGCGGGGCGTGGGCGCGGGTGGGCAATGGTCGGGCGGCGAGCACG
ACGGCGGCGCGGGCAGGGCTGTGGGACTTCGTGGGAGGGGACCTGGTGAAGCCGGACATG
GGGCGGTGGCTGGACGACGTGGAGAAGCACAAGTCGCTGGCCATCTACCCGCCGCACGAG
GGCGGCTACGAGGGCCGCTACCTCAGCCGCCTCAGCTACCAGGGCTACTACTTCCTCGAC
CTCTCCGCCCGCGGCCTCGGCGACCCCGAGACCACCCTCACCAAGATCCACCCCGTCTGC
CCGCCGAGCCTCGGGAGGCAGCCGGTGGCGAGGTGGTACTTCCCGCCGGAGGTGGACTAC
AGGCTCAGCTTGCTGCACCCGGACGCCAAGGGCCTCGTCGTCTGGGTCATGGAAGCCAAG
GTTCTCTCCAAGGCCGAGCTGCAGTTCCTCGCCATTCTCCCTGACATCCGCCCCAAAGTC
AGGGTGATCGCGGAATGCGGCAACTGGAGGAAATTTGTGTGGAAGCCGCTGAAGCAAATC
GCGGGCCTTGAGCCGGACCCTGACGCAGAGGAATGA

Peptide Sequence

PEP ID

Os01t0882500-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:38306570:38307754:-1 gene:Os01g0882500 transcript:Os01t0882500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NADH dehydrogenase I subunit N. (Os01t0882500-00)
Sequence

MWSAAAARTVTPLPAASPLQQHQQRRGAWARVGNGRAASTTAARAGLWDFVGGDLVKPDM
GRWLDDVEKHKSLAIYPPHEGGYEGRYLSRLSYQGYYFLDLSARGLGDPETTLTKIHPVC
PPSLGRQPVARWYFPPEVDYRLSLLHPDAKGLVVWVMEAKVLSKAELQFLAILPDIRPKV
RVIAECGNWRKFVWKPLKQIAGLEPDPDAEE

Transcript Sequence

Transcript ID

Os01t0882500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:38306570:38307754:-1 gene:Os01g0882500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NADH dehydrogenase I subunit N. (Os01t0882500-00)
Sequence

CAAACAAACGACACCCACCCACCCACACACACTACACTACAGCAACCAGCGATGTGGTCG
GCGGCGGCGGCGCGCACGGTGACCCCGCTGCCGGCGGCGTCGCCCCTGCAGCAGCATCAG
CAGCGGCGCGGGGCGTGGGCGCGGGTGGGCAATGGTCGGGCGGCGAGCACGACGGCGGCG
CGGGCAGGGCTGTGGGACTTCGTGGGAGGGGACCTGGTGAAGCCGGACATGGGGCGGTGG
CTGGACGACGTGGAGAAGCACAAGTCGCTGGCCATCTACCCGCCGCACGAGGGCGGCTAC
GAGGGCCGCTACCTCAGCCGCCTCAGCTACCAGGGCTACTACTTCCTCGACCTCTCCGCC
CGCGGCCTCGGCGACCCCGAGACCACCCTCACCAAGATCCACCCCGTCTGCCCGCCGAGC
CTCGGGAGGCAGCCGGTGGCGAGGTGGTACTTCCCGCCGGAGGTGGACTACAGGCTCAGC
TTGCTGCACCCGGACGCCAAGGGCCTCGTCGTCTGGGTCATGGAAGCCAAGGTTCTCTCC
AAGGCCGAGCTGCAGTTCCTCGCCATTCTCCCTGACATCCGCCCCAAAGTCAGGGTGATC
GCGGAATGCGGCAACTGGAGGAAATTTGTGTGGAAGCCGCTGAAGCAAATCGCGGGCCTT
GAGCCGGACCCTGACGCAGAGGAATGAACAAGATCAAGACCATTAACAGGCAGCCTGAAA
CAAAGTTACTTGATATATATCTCATCCAACACACATTGTTTCCCGCTTTGTACTTCACTT
GAGAGAGGCAATGAAGAATGTACATACATTTTGGCTCAAATTACCCCAAGACAACCATGT
AAAATCAAACTTTCACATAATACAAATCCATCA