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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0882300-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:38301350:38305568:1 gene:Os01g0882300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF803 family protein. (Os01t0882300-01);Similar to permease-related. (Os01t0882300-02)
Sequence

ATTGTTGGAGAAGTAGCTAACTTTGCAGCATATGCCTTTGCTCCTGCTATCTTAGTAACC
CCACTTGGTGCGCTAAGCATCATCATCAGTGCTGTTCTTGCAGATATTATGTTGAAGGAG
AAGCTTCACATATTTGGTATACTTGGTTGTGTCCTCTGTGTTGTGGGTTCAACAACCATT
GTGCTTCATGCGCCGCAGGAGCGTGAAATTGATTCTGTAGCTGAAGTGTGGGCTCTTGCT
ACTGAACCAGCCTTTCTATTTTATGCAGTCACTGTGCTTGCTGCGACTTTTGTGCTCATA
TTCCGCTTTATCCCCCAATATGGTCAGACACACATTATGGTGTATATTGGTGTTTGTTCT
CTTGTAGGGTCTCTCTCGGTCATGAGTGTGAAAGCACTTGGAATAGCCTTGAAACTGACT
TTTTCAGGAATGAACCAGCTAATCTATCCACAGACATGGATGTTCACCATTGTTGTTGTT
GCATGTATACTAACTCAGATGAACTATCTAAACAAGGCTCTTGACACATTCAATACTGCA
GTTGTTTCGCCTATATATTATACAATGTTTACATCACTAACCATTTTGGCTAGTGTGATA
ATGTTCAAGGACTGGGATCGTCAAAATCCAACTCAAATTGTGACAGAGATGTGTGGTTTT
GTTACCATCCTTTCTGGGACGTTTCTTCTTCACAAGACGAAAGATATGGTCGATGGACTC
CCACCAACTCTACCTATCCGAATACCGAAACATGATGAAGATGGCTATGCGGCTGAAGGC
ATCCCCCTCAGGTCTGCTGCTGAAGGCCTCCCTCTTAGGTCACCAAGAGCAGCAGAATGA

Peptide Sequence

PEP ID

Os01t0882300-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:38301350:38305568:1 gene:Os01g0882300 transcript:Os01t0882300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF803 family protein. (Os01t0882300-01);Similar to permease-related. (Os01t0882300-02)
Sequence

IVGEVANFAAYAFAPAILVTPLGALSIIISAVLADIMLKEKLHIFGILGCVLCVVGSTTI
VLHAPQEREIDSVAEVWALATEPAFLFYAVTVLAATFVLIFRFIPQYGQTHIMVYIGVCS
LVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWMFTIVVVACILTQMNYLNKALDTFNTA
VVSPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDMVDGL
PPTLPIRIPKHDEDGYAAEGIPLRSAAEGLPLRSPRAAE

Transcript Sequence

Transcript ID

Os01t0882300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:38301350:38305568:1 gene:Os01g0882300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF803 family protein. (Os01t0882300-01);Similar to permease-related. (Os01t0882300-02)
Sequence

TGATTGTTGGAGAAGTAGCTAACTTTGCAGCATATGCCTTTGCTCCTGCTATCTTAGTAA
CCCCACTTGGTGCGCTAAGCATCATCATCAGTGCTGTTCTTGCAGATATTATGTTGAAGG
AGAAGCTTCACATATTTGGTATACTTGGTTGTGTCCTCTGTGTTGTGGGTTCAACAACCA
TTGTGCTTCATGCGCCGCAGGAGCGTGAAATTGATTCTGTAGCTGAAGTGTGGGCTCTTG
CTACTGAACCAGCCTTTCTATTTTATGCAGTCACTGTGCTTGCTGCGACTTTTGTGCTCA
TATTCCGCTTTATCCCCCAATATGGTCAGACACACATTATGGTGTATATTGGTGTTTGTT
CTCTTGTAGGGTCTCTCTCGGTCATGAGTGTGAAAGCACTTGGAATAGCCTTGAAACTGA
CTTTTTCAGGAATGAACCAGCTAATCTATCCACAGACATGGATGTTCACCATTGTTGTTG
TTGCATGTATACTAACTCAGATGAACTATCTAAACAAGGCTCTTGACACATTCAATACTG
CAGTTGTTTCGCCTATATATTATACAATGTTTACATCACTAACCATTTTGGCTAGTGTGA
TAATGTTCAAGGACTGGGATCGTCAAAATCCAACTCAAATTGTGACAGAGATGTGTGGTT
TTGTTACCATCCTTTCTGGGACGTTTCTTCTTCACAAGACGAAAGATATGGTCGATGGAC
TCCCACCAACTCTACCTATCCGAATACCGAAACATGATGAAGATGGCTATGCGGCTGAAG
GCATCCCCCTCAGGTCTGCTGCTGAAGGCCTCCCTCTTAGGTCACCAAGAGCAGCAGAAT
GATTTTGACCAGCGAACTGCAAGCAATCCCAGCCATTCTTTCATTCCATACAAATTGTAG
ATGTACTTTAGGTCTTATAAGGTAAAAGCTCGGCTCCCCTGTAATTTTTGAGACATCGGT
ACAGATTGGGGATAGATACCCCTTATACATCTCAAGATACCCAGAATGGGTTAGAATCAA
AAAGGTTTTTTGGATGTAAATCCCGGGTGATGGTCTGATAGATGCATATGCCGTTCTTTG
GAACTGTTGTATTCTTTGAAATGAACAATTAGAAGTAGGAAGAGCAACTCCAAGAAGATA
CCATTGCTGATT