Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0881900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:38275062:38279030:-1 gene:Os01g0881900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, cysteine-containing containing protein. (Os01t0881900-01)
Sequence	ATGGACGGTGAGCAGCTGATGAGTGGTGAATTGGACAATTCGTTCAACGCACTCATGGTT TCTGGAGAGGGTGAGAGTGGACAGGCACATCATGAGGGCACAGGGACTACCTTGTTAGGT TGGAAGGACCTTCCCATGGAGCTGCTCCTGCGGATATTATCGATGGCTGGAGACGACAGG ATGGTAATCGTGGGCTCTGGTGTTTGCACCGGTTGGCGTGATACATTAGAATGGGGAGTC ACGAATCTTTCTCTTTCGTGGTGCCAGGCTCACATGAATGACTTAGTGATGTCACTTGCT CAGAAATTTACGAAGCTGCAAGTTCTTTCTTTACGGCAAATCAAACCTCAGCTCGAGGAC AGTGCAGTGGAGGCTGTAGCAAATAACTGTCATGATTTACGCGAGTTGGATCTTAGCAGA AGCTTTAGGCTTAGCGACCGATCGTTGTATGCTCTGGCACATGGATGCCCCCATCTTACA AGGCTCAACATCAGTGGATGTTCCAATTTCAGCGATGCTGCTTTGGCCTATCTCAGTAGC CAGTGCAAGAACCTGAAATGCCTGAATCTGTGCGGGTGTGTGAGGGCAGTTTCCGACAGA GCATTGCAGGCCATCGCCTGTAACTGTGGTCAGCTTCAGTCTTTGAACCTAGGCTGGTGT GATAGTGTAACTGACAAGGGAGTGACCAGCTTGGCATCAGGGTGCCCTGAACTTCGGGCT CTGGACTTGTGTGGCTGTGTTCTGATAACAGATGAGAGCGTGGTCGCTCTTGCCAATGGC TGCCCTCACCTGCGGTCGCTGGGGCTCTACTACTGCCAGAACATCACCGACCGGGCAATG TACTCGCTGGCGGCGAACAGCCGGCGGGTGAGGAGCAAAGGCCGGAGCTGGGACGCGGCG GCGAGGAAGAACGCCGGCGCCGGCGCCGACGGGCTGGCCAGCCTGAACATCAGCCAGTGC ACGGCGCTGACGCCGCCGGCGGTCCAGGCGGTGTGCGACTCCTTCCCGGCGCTCCACACG TGCCCGGAGCGGCACTCCCTCATCATCAGCGGATGCCTCAGCCTCACCTCCGTCCACTGC GCCTGCGCTCACCACCCGCACCGCCATGGGAGGGCCATCCTCTCCAACCATGCCTACTAG

Peptide Sequence

PEP ID	Os01t0881900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:38275062:38279030:-1 gene:Os01g0881900 transcript:Os01t0881900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, cysteine-containing containing protein. (Os01t0881900-01)
Sequence	MDGEQLMSGELDNSFNALMVSGEGESGQAHHEGTGTTLLGWKDLPMELLLRILSMAGDDR MVIVGSGVCTGWRDTLEWGVTNLSLSWCQAHMNDLVMSLAQKFTKLQVLSLRQIKPQLED SAVEAVANNCHDLRELDLSRSFRLSDRSLYALAHGCPHLTRLNISGCSNFSDAALAYLSS QCKNLKCLNLCGCVRAVSDRALQAIACNCGQLQSLNLGWCDSVTDKGVTSLASGCPELRA LDLCGCVLITDESVVALANGCPHLRSLGLYYCQNITDRAMYSLAANSRRVRSKGRSWDAA ARKNAGAGADGLASLNISQCTALTPPAVQAVCDSFPALHTCPERHSLIISGCLSLTSVHC ACAHHPHRHGRAILSNHAY

Transcript Sequence

Transcript ID	Os01t0881900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:38275062:38279030:-1 gene:Os01g0881900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, cysteine-containing containing protein. (Os01t0881900-01)
Sequence	AGCCGCCAGTTCACAACTGCGGCAAAAACCAAAAACAAAATTCTCCCCCGGGTTATCGAC TGCCTCATCTAGAGTTTCTTCTTTCTTCGCGTGTTCTTGGAGGAGGAGCGAGGACTAGGT GAGTAAGAAAGGAAGTTTCACGTCTTATGGGGGTGAATTCTTTTGCGGGATTTCTTGGCC TTTGTGTCTGGGATTCGTGGTAGATGCTGATGAGGAGATCGCCATCTCTCGTGGTTTGGA TCCCATGTAGTTTTCTTGGATGCTGTATGAATCTTTGAGCTTTACTCTGCATTTCGGGAG GAGCTGTTTTGTTTGTGTGGCTGGCTGTGCGCGAAAGCTACTGCGATCCTTAGCGATGGA GTTGTTTTCTTCTTTTTCCTCCCTTTCTTGAAGATATTTAGACCAGGTCACTATCAGTCT TGAACGGATGTTATCTGCGTTGGAGATTGACTCCGTTATCATTCGCTCATTCATCTCGCC TCCAAATGATTTGAGCTTTTTCTTGGTGAATTTTCCTGGATTAGCTTCTCGTGGCCCGGA ATCATCTGAAAGCCTAGCTTTGTTGCCTACTTGCCTCTTGTTGATTGGGATTTGCGGTGC CGGCCACGCCTCTGGTGTTTTAGCGACAGAAGGGATTGAATTTTTCGGCCAAATCAAAGG CTGGGCAGCTTGCGCCTCGCCTCCTCCTTGCTTGCCGTCTCATCTGCATTTGGGTTTAAT GCGGTTCTGACCTTTACAAGGAGCTCCCTTTTTTATACAAAAGGGAAAAAAAAAAGTTCG GTTTCTGCTCAAATTGCCACTTGCAGAGAATACGTGCTTTTTTAGGAGCTCCTTTGAGGT TAGCTGTATTCGGAGCTTCAGATTATCCAAAAAAAAAAAAAGAATGGACGGTGAGCAGCT GATGAGTGGTGAATTGGACAATTCGTTCAACGCACTCATGGTTTCTGGAGAGGGTGAGAG TGGACAGGCACATCATGAGGGCACAGGGACTACCTTGTTAGGTTGGAAGGACCTTCCCAT GGAGCTGCTCCTGCGGATATTATCGATGGCTGGAGACGACAGGATGGTAATCGTGGGCTC TGGTGTTTGCACCGGTTGGCGTGATACATTAGAATGGGGAGTCACGAATCTTTCTCTTTC GTGGTGCCAGGCTCACATGAATGACTTAGTGATGTCACTTGCTCAGAAATTTACGAAGCT GCAAGTTCTTTCTTTACGGCAAATCAAACCTCAGCTCGAGGACAGTGCAGTGGAGGCTGT AGCAAATAACTGTCATGATTTACGCGAGTTGGATCTTAGCAGAAGCTTTAGGCTTAGCGA CCGATCGTTGTATGCTCTGGCACATGGATGCCCCCATCTTACAAGGCTCAACATCAGTGG ATGTTCCAATTTCAGCGATGCTGCTTTGGCCTATCTCAGTAGCCAGTGCAAGAACCTGAA ATGCCTGAATCTGTGCGGGTGTGTGAGGGCAGTTTCCGACAGAGCATTGCAGGCCATCGC CTGTAACTGTGGTCAGCTTCAGTCTTTGAACCTAGGCTGGTGTGATAGTGTAACTGACAA GGGAGTGACCAGCTTGGCATCAGGGTGCCCTGAACTTCGGGCTCTGGACTTGTGTGGCTG TGTTCTGATAACAGATGAGAGCGTGGTCGCTCTTGCCAATGGCTGCCCTCACCTGCGGTC GCTGGGGCTCTACTACTGCCAGAACATCACCGACCGGGCAATGTACTCGCTGGCGGCGAA CAGCCGGCGGGTGAGGAGCAAAGGCCGGAGCTGGGACGCGGCGGCGAGGAAGAACGCCGG CGCCGGCGCCGACGGGCTGGCCAGCCTGAACATCAGCCAGTGCACGGCGCTGACGCCGCC GGCGGTCCAGGCGGTGTGCGACTCCTTCCCGGCGCTCCACACGTGCCCGGAGCGGCACTC CCTCATCATCAGCGGATGCCTCAGCCTCACCTCCGTCCACTGCGCCTGCGCTCACCACCC GCACCGCCATGGGAGGGCCATCCTCTCCAACCATGCCTACTAGCAAGCTCCCTCTTGTAG AAACTAGAACAGCTCGGATTTGAGGAAGATGTAAATTAAAACCCCAGGATTGCTTACGAT GGACTGGGGAAAACTGCTTCTGTGTTTGTGGATGGATGGTGTCATGGATCATATGTTTCT TTTGGATCAAAATCTCTGAAGAGTATATGCATGAGGAATAAGTTTACTTTGTGACC