Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0881500-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:38261856:38265459:-1 gene:Os01g0881500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Arabidopsis thaliana scarecrow-like 1 description:Similar to Scarecrow-like 1 (Fragment). (Os01t0881500-01);Similar to Scarecrow-like 1 (Fragment). (Os01t0881500-02)
Sequence	ATGTCTTTTATCAGGCGAGCAGACCCGTCAACCACTTACGCAGATAATCTTTACATACAT AAATTTGGCACTCCAAATTCAAATTTCGCTGCACGAAGATATGCGTCCGACACACAGCTG TTCCGTTATGGGCCTGAACCATACAATCCTGAGAACTCCTTTTACAATCAACAGGCCTCA CCAATGCCGTACATGGTAACAGCTGATGGCCATTCTCCATCTTCTGCAGACAATTCCTGC TCAGATGTGGCAAAAGACTCACCATTGGTGTCCAATGTATCTCAGCAGAATTCTCAGTCT ATATCAGACAATCAGAGTTCTGAACTTGAAGTAGAGTTTGATGAAGATGATATCAGGATG AAGCTTCAGGAGCTGGAGCATGCTTTACTTGATGATAGTGATGACATCTTGTATGAGATT TCCCAGGCAGGTAGCATTAACGATGAATGGGCTGATCCAATGAAGAATGTCATACTCCCT AACTCACCAAAAGAATCGGAATCAAGCATCAGTTGTGCTGGTAGCAACAATGGAGAACCA CGGACCCCAAAGCAGTTGCTCTTTGACTGTGCAATGGCATTATCTGATTATAATGTAGAT GAAGCACAGGCAATCATAACGGACCTCCGGCAGATGGTCTCAATCCAAGGGGACCCTTCT CAGAGGATTGCAGCCTATCTAGTGGAAGGTCTTGCAGCAAGAATAGTAGCTTCAGGGAAA GGCATATACAAGGCCTTGTCGTGCAAAGAGCCCCCGACTCTTTATCAGCTTTCGGCAATG CAAATCCTCTTTGAAATCTGCCCGTGCTTCCGATTTGGTTTCATGGCTGCTAATTATGCT ATACTTGAAGCCTGCAAAGGTGAAGATAGAGTGCACATTATAGACTTTGACATTAATCAG GGCAGCCAGTACATTACACTGATACAGTTTCTGAAAAATAATGCAAATAAGCCACGTCAT TTGAGAATAACTGGTGTGGATGATCCTGAAACGGTACAGAGGACCGTTGGCGGTTTGAAG GTCATTGGTCAACGTCTAGAGAAACTTGCAGAGGACTGTGGGATATCTTTTGAGTTCAGG GCAGTTGGTGCTAACATTGGGGATGTTACACCTGCAATGCTAGATTGTTGTCCTGGGGAA GCACTAGTTGTCAATTTTGCATTCCAGCTGCACCACCTTCCTGACGAGAGCGTTTCAATT ATGAATGAAAGGGACCAACTCCTTCGAATGGTGAAGGGTCTGCAACCAAAGCTCGTCACA CTGGTTGAGCAGGATGCCAATACCAATACTGCTCCATTTCAGACAAGGTTCCGTGAGGTT TATGATTATTATGCTGCACTTTTTGATTCACTGGACGCGACACTTCCAAGGGAAAGTCCG GATAGAATGAATGTGGAGCGGCAATGTCTTGCTCGTGAAATTGTCAACATCTTGGCTTGC GAAGGTCCTGATCGTGTGGAGAGATATGAAGTTGCTGGAAAATGGAGGGCAAGAATGACA ATGGCTGGCTTCACACCATGCCCATTTAGTAGCAATGTCATCAGCGGGATAAGATCGTTA CTGAAGTCGTACTGTGACAGATACAAGTTCGAGGAGGACCATGGGGGACTTCACTTCGGC TGGGGAGAGAAAACTCTAATCGTCTCCTCCGCATGGCAATAG

Peptide Sequence

PEP ID	Os01t0881500-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:38261856:38265459:-1 gene:Os01g0881500 transcript:Os01t0881500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Arabidopsis thaliana scarecrow-like 1 description:Similar to Scarecrow-like 1 (Fragment). (Os01t0881500-01);Similar to Scarecrow-like 1 (Fragment). (Os01t0881500-02)
Sequence	MSFIRRADPSTTYADNLYIHKFGTPNSNFAARRYASDTQLFRYGPEPYNPENSFYNQQAS PMPYMVTADGHSPSSADNSCSDVAKDSPLVSNVSQQNSQSISDNQSSELEVEFDEDDIRM KLQELEHALLDDSDDILYEISQAGSINDEWADPMKNVILPNSPKESESSISCAGSNNGEP RTPKQLLFDCAMALSDYNVDEAQAIITDLRQMVSIQGDPSQRIAAYLVEGLAARIVASGK GIYKALSCKEPPTLYQLSAMQILFEICPCFRFGFMAANYAILEACKGEDRVHIIDFDINQ GSQYITLIQFLKNNANKPRHLRITGVDDPETVQRTVGGLKVIGQRLEKLAEDCGISFEFR AVGANIGDVTPAMLDCCPGEALVVNFAFQLHHLPDESVSIMNERDQLLRMVKGLQPKLVT LVEQDANTNTAPFQTRFREVYDYYAALFDSLDATLPRESPDRMNVERQCLAREIVNILAC EGPDRVERYEVAGKWRARMTMAGFTPCPFSSNVISGIRSLLKSYCDRYKFEEDHGGLHFG WGEKTLIVSSAWQ

Transcript Sequence

Transcript ID	Os01t0881500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:38261856:38265459:-1 gene:Os01g0881500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Arabidopsis thaliana scarecrow-like 1 description:Similar to Scarecrow-like 1 (Fragment). (Os01t0881500-01);Similar to Scarecrow-like 1 (Fragment). (Os01t0881500-02)
Sequence	GCTCCCTCTCCTTCCCATTTCCGTTCTCCGCTTCCCCACCTCGCCTTCTCCGCTCCTCCT CCTCCTCCTCTCCTGCCGCTCTCCTGTGTGTGCTACCGGAAGCAAGCTACCCCCTCCTCC TGTATTTGTTCAATATCCATAATCAGAGGAAGCTGTGCCTTGAGTTTGAGTATTTAGCCT AGTAGGTTTAGAAGCACTACAGAAAAGTAATGTCTTTTATCAGGCGAGCAGACCCGTCAA CCACTTACGCAGATAATCTTTACATACATAAATTTGGCACTCCAAATTCAAATTTCGCTG CACGAAGATATGCGTCCGACACACAGCTGTTCCGTTATGGGCCTGAACCATACAATCCTG AGAACTCCTTTTACAATCAACAGGCCTCACCAATGCCGTACATGGTAACAGCTGATGGCC ATTCTCCATCTTCTGCAGACAATTCCTGCTCAGATGTGGCAAAAGACTCACCATTGGTGT CCAATGTATCTCAGCAGAATTCTCAGTCTATATCAGACAATCAGAGTTCTGAACTTGAAG TAGAGTTTGATGAAGATGATATCAGGATGAAGCTTCAGGAGCTGGAGCATGCTTTACTTG ATGATAGTGATGACATCTTGTATGAGATTTCCCAGGCAGGTAGCATTAACGATGAATGGG CTGATCCAATGAAGAATGTCATACTCCCTAACTCACCAAAAGAATCGGAATCAAGCATCA GTTGTGCTGGTAGCAACAATGGAGAACCACGGACCCCAAAGCAGTTGCTCTTTGACTGTG CAATGGCATTATCTGATTATAATGTAGATGAAGCACAGGCAATCATAACGGACCTCCGGC AGATGGTCTCAATCCAAGGGGACCCTTCTCAGAGGATTGCAGCCTATCTAGTGGAAGGTC TTGCAGCAAGAATAGTAGCTTCAGGGAAAGGCATATACAAGGCCTTGTCGTGCAAAGAGC CCCCGACTCTTTATCAGCTTTCGGCAATGCAAATCCTCTTTGAAATCTGCCCGTGCTTCC GATTTGGTTTCATGGCTGCTAATTATGCTATACTTGAAGCCTGCAAAGGTGAAGATAGAG TGCACATTATAGACTTTGACATTAATCAGGGCAGCCAGTACATTACACTGATACAGTTTC TGAAAAATAATGCAAATAAGCCACGTCATTTGAGAATAACTGGTGTGGATGATCCTGAAA CGGTACAGAGGACCGTTGGCGGTTTGAAGGTCATTGGTCAACGTCTAGAGAAACTTGCAG AGGACTGTGGGATATCTTTTGAGTTCAGGGCAGTTGGTGCTAACATTGGGGATGTTACAC CTGCAATGCTAGATTGTTGTCCTGGGGAAGCACTAGTTGTCAATTTTGCATTCCAGCTGC ACCACCTTCCTGACGAGAGCGTTTCAATTATGAATGAAAGGGACCAACTCCTTCGAATGG TGAAGGGTCTGCAACCAAAGCTCGTCACACTGGTTGAGCAGGATGCCAATACCAATACTG CTCCATTTCAGACAAGGTTCCGTGAGGTTTATGATTATTATGCTGCACTTTTTGATTCAC TGGACGCGACACTTCCAAGGGAAAGTCCGGATAGAATGAATGTGGAGCGGCAATGTCTTG CTCGTGAAATTGTCAACATCTTGGCTTGCGAAGGTCCTGATCGTGTGGAGAGATATGAAG TTGCTGGAAAATGGAGGGCAAGAATGACAATGGCTGGCTTCACACCATGCCCATTTAGTA GCAATGTCATCAGCGGGATAAGATCGTTACTGAAGTCGTACTGTGACAGATACAAGTTCG AGGAGGACCATGGGGGACTTCACTTCGGCTGGGGAGAGAAAACTCTAATCGTCTCCTCCG CATGGCAATAGAGCTTACAGAATGAGTTGGCATTAGTCTTGCTGTTATTTAGGAGCATCT GATGCAGAGACTGTAAAAAATGTGAACCACTGAACTTGTCAACTGATCTTACCTAATCGT AGATGTCTGCTTGTCAGAATAATCGAGTTAGTTGAACTATGTTGTATTAGAGAATTGGCA CATGATCGTGTTGTATTCTGGGGTAGAATTATCTTGTCGACTCTGCTTCATGTATAAAAT TATGTGTTGCTAGAATATGCCATATTTATCATCTTGGGAGCCTAAATGGTATT